RNA–Protein interactions for RNA: ENST00000511697.1

CALCOCO2-219, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-219ENST00000511697 NIM1KQ8IY84 436 aa12.94□□□□□ -0.34
CALCOCO2-219ENST00000511697 TMX4Q9H1E5 349 aaPredicted RBP12.94□□□□□ -0.34
CALCOCO2-219ENST00000511697 BABAM1Q9NWV8 329 aa12.94□□□□□ -0.34
CALCOCO2-219ENST00000511697 EPS15P42566 896 aa12.93□□□□□ -0.34
CALCOCO2-219ENST00000511697 VEGFBP49765 207 aa12.93□□□□□ -0.34
CALCOCO2-219ENST00000511697 SCNN1DP51172 638 aa12.93□□□□□ -0.34
CALCOCO2-219ENST00000511697 GRIPAP1Q4V328 841 aa12.93□□□□□ -0.34
CALCOCO2-219ENST00000511697 ATP6V0A2Q9Y487 856 aa12.93□□□□□ -0.34
CALCOCO2-219ENST00000511697 FOXN1O15353 648 aa12.92□□□□□ -0.34
CALCOCO2-219ENST00000511697 WDR43Q15061 677 aaKnown RBP eCLIP12.92□□□□□ -0.34
CALCOCO2-219ENST00000511697 HSP90AB3PQ58FF7 597 aa12.92□□□□□ -0.34
CALCOCO2-219ENST00000511697 SLC10A5Q5PT55 438 aa12.92□□□□□ -0.34
CALCOCO2-219ENST00000511697 NLRP10Q86W26 655 aa12.92□□□□□ -0.34
CALCOCO2-219ENST00000511697 DDX60Q8IY21 1712 aaKnown RBP12.92□□□□□ -0.34
CALCOCO2-219ENST00000511697 TRPM7Q96QT4 1865 aa12.92□□□□□ -0.34
CALCOCO2-219ENST00000511697 CHPF2Q9P2E5 772 aa12.92□□□□□ -0.34
CALCOCO2-219ENST00000511697 TRMT112Q9UI30 125 aaKnown RBP12.92□□□□□ -0.34
CALCOCO2-219ENST00000511697 ABT1Q9ULW3 272 aaKnown RBP12.92□□□□□ -0.34
CALCOCO2-219ENST00000511697 CHL1O00533 1208 aa12.91□□□□□ -0.34
CALCOCO2-219ENST00000511697 FMR1Q06787 632 aaKnown RBP eCLIP12.91□□□□□ -0.34
CALCOCO2-219ENST00000511697 RUNDC1Q96C34 613 aa12.91□□□□□ -0.34
CALCOCO2-219ENST00000511697 DDX21Q9NR30 783 aaKnown RBP eCLIP12.91□□□□□ -0.34
CALCOCO2-219ENST00000511697 TRIM35Q9UPQ4 493 aa12.91□□□□□ -0.34
CALCOCO2-219ENST00000511697 TCIRG1Q13488 830 aa12.9□□□□□ -0.34
CALCOCO2-219ENST00000511697 HDGFL1Q5TGJ6 251 aa12.9□□□□□ -0.34
CALCOCO2-219ENST00000511697 DPP8Q6V1X1 898 aaPredicted RBP12.9□□□□□ -0.34
CALCOCO2-219ENST00000511697 DDX46Q7L014 1031 aaKnown RBP12.9□□□□□ -0.34
CALCOCO2-219ENST00000511697 AIDAQ96BJ3 306 aa12.9□□□□□ -0.34
CALCOCO2-219ENST00000511697 SH3TC1Q8TE82 1336 aa12.89□□□□□ -0.35
CALCOCO2-219ENST00000511697 DEFB115Q30KQ5 88 aa12.89□□□□□ -0.35
CALCOCO2-219ENST00000511697 PAXIP1Q6ZW49 1069 aaPredicted RBP12.89□□□□□ -0.35
CALCOCO2-219ENST00000511697 MPNDQ8N594 471 aa12.89□□□□□ -0.35
CALCOCO2-219ENST00000511697 SUPT20HQ8NEM7 779 aa12.89□□□□□ -0.35
CALCOCO2-219ENST00000511697 ADAMTS8Q9UP79 889 aa12.89□□□□□ -0.35
CALCOCO2-219ENST00000511697 LRRC37AA6NMS7 1700 aa12.88□□□□□ -0.35
CALCOCO2-219ENST00000511697 RASSF10A6NK89 507 aa12.88□□□□□ -0.35
CALCOCO2-219ENST00000511697 TRAF5O00463 557 aa12.88□□□□□ -0.35
CALCOCO2-219ENST00000511697 BBOX1O75936 387 aa12.88□□□□□ -0.35
CALCOCO2-219ENST00000511697 CXCL9Q07325 125 aa12.88□□□□□ -0.35
CALCOCO2-219ENST00000511697 GRM1Q13255 1194 aa12.88□□□□□ -0.35
CALCOCO2-219ENST00000511697 GRAPQ13588 217 aa12.88□□□□□ -0.35
CALCOCO2-219ENST00000511697 USP50Q70EL3 339 aaPredicted RBP12.88□□□□□ -0.35
CALCOCO2-219ENST00000511697 SP8Q8IXZ3 490 aa12.88□□□□□ -0.35
CALCOCO2-219ENST00000511697 GRAPLQ8TC17 118 aaPredicted RBP12.88□□□□□ -0.35
CALCOCO2-219ENST00000511697 RTFDC1Q9BY42 306 aaPredicted RBP12.88□□□□□ -0.35
CALCOCO2-219ENST00000511697 GPRC5DQ9NZD1 345 aa12.88□□□□□ -0.35
CALCOCO2-219ENST00000511697 ZNRF3Q9ULT6 936 aa12.88□□□□□ -0.35
CALCOCO2-219ENST00000511697 DUOX1Q9NRD9 1551 aa12.88□□□□□ -0.35
CALCOCO2-219ENST00000511697 WDR33Q9C0J8 1336 aaKnown RBP12.88□□□□□ -0.35
CALCOCO2-219ENST00000511697 COL4A1P02462 1669 aa12.87□□□□□ -0.35
CALCOCO2-219ENST00000511697 ATP5J2-PTCD1G3V325 749 aa12.87□□□□□ -0.35
CALCOCO2-219ENST00000511697 RAD17O75943 681 aa12.87□□□□□ -0.35
CALCOCO2-219ENST00000511697 GMPSP49915 693 aaPredicted RBP12.87□□□□□ -0.35
CALCOCO2-219ENST00000511697 RTL5Q5HYW3 569 aaPredicted RBP12.87□□□□□ -0.35
CALCOCO2-219ENST00000511697 PLBD2Q8NHP8 589 aa12.87□□□□□ -0.35
CALCOCO2-219ENST00000511697 SPOCK2Q92563 424 aa12.87□□□□□ -0.35
CALCOCO2-219ENST00000511697 FAM89AQ96GI7 184 aa12.87□□□□□ -0.35
CALCOCO2-219ENST00000511697 VPS33BQ9H267 617 aa12.87□□□□□ -0.35
CALCOCO2-219ENST00000511697 ADARB2Q9NS39 739 aaKnown RBP12.87□□□□□ -0.35
CALCOCO2-219ENST00000511697 PRR29P0C7W0 189 aa12.86□□□□□ -0.35
CALCOCO2-219ENST00000511697 CTCFP49711 727 aaPredicted RBP12.86□□□□□ -0.35
CALCOCO2-219ENST00000511697 LBX1P52954 281 aa12.86□□□□□ -0.35
CALCOCO2-219ENST00000511697 KIAA2012Q0VF49 1180 aa12.86□□□□□ -0.35
CALCOCO2-219ENST00000511697 CIAPIN1Q6FI81 312 aa12.86□□□□□ -0.35
CALCOCO2-219ENST00000511697 ANKRD13DQ6ZTN6 518 aa12.86□□□□□ -0.35
CALCOCO2-219ENST00000511697 BCL2L13Q9BXK5 485 aa12.86□□□□□ -0.35
CALCOCO2-219ENST00000511697 WBP1LQ9NX94 342 aa12.86□□□□□ -0.35
CALCOCO2-219ENST00000511697 DBF4Q9UBU7 674 aaPredicted RBP12.86□□□□□ -0.35
CALCOCO2-219ENST00000511697 THSD7BQ9C0I4 1608 aa12.85□□□□□ -0.35
CALCOCO2-219ENST00000511697 HOXB7P09629 217 aa12.85□□□□□ -0.35
CALCOCO2-219ENST00000511697 DUSP27Q5VZP5 1158 aa12.85□□□□□ -0.35
CALCOCO2-219ENST00000511697 CFAP44Q96MT7 982 aa12.85□□□□□ -0.35
CALCOCO2-219ENST00000511697 ISCA1Q9BUE6 129 aa12.85□□□□□ -0.35
CALCOCO2-219ENST00000511697 PRDM10Q9NQV6 1147 aa12.85□□□□□ -0.35
CALCOCO2-219ENST00000511697 MBIPQ9NS73 344 aa12.85□□□□□ -0.35
CALCOCO2-219ENST00000511697 SHTN1A0MZ66 631 aa12.84□□□□□ -0.35
CALCOCO2-219ENST00000511697 YDJCA8MPS7 323 aa12.84□□□□□ -0.35
CALCOCO2-219ENST00000511697 PITPNM1O00562 1244 aa12.84□□□□□ -0.35
CALCOCO2-219ENST00000511697 TNIP1Q15025 636 aa12.84□□□□□ -0.35
CALCOCO2-219ENST00000511697 CST9Q5W186 159 aa12.84□□□□□ -0.35
CALCOCO2-219ENST00000511697 CYP4F22Q6NT55 531 aa12.84□□□□□ -0.35
CALCOCO2-219ENST00000511697 CELF1Q92879 486 aaKnown RBP12.84□□□□□ -0.35
CALCOCO2-219ENST00000511697 CAPNS2Q96L46 248 aa12.84□□□□□ -0.35
CALCOCO2-219ENST00000511697 HYPKQ9NX55 129 aa12.84□□□□□ -0.35
CALCOCO2-219ENST00000511697 ELL2O00472 640 aaPredicted RBP12.83□□□□□ -0.36
CALCOCO2-219ENST00000511697 MAP2K1Q02750 393 aaPredicted RBP12.83□□□□□ -0.36
CALCOCO2-219ENST00000511697 TMC4Q7Z404 712 aa12.83□□□□□ -0.36
CALCOCO2-219ENST00000511697 TRPM4Q8TD43 1214 aa12.83□□□□□ -0.36
CALCOCO2-219ENST00000511697 GLIS2Q9BZE0 524 aaPredicted RBP12.83□□□□□ -0.36
CALCOCO2-219ENST00000511697 ZNF408Q9H9D4 720 aa12.83□□□□□ -0.36
CALCOCO2-219ENST00000511697 DBNDD1Q9H9R9 158 aa12.83□□□□□ -0.36
CALCOCO2-219ENST00000511697 NSFL1CQ9UNZ2 370 aaKnown RBP12.83□□□□□ -0.36
CALCOCO2-219ENST00000511697 C6orf229H3BNL8 230 aa12.82□□□□□ -0.36
CALCOCO2-219ENST00000511697 IRS4O14654 1257 aaPredicted RBP12.82□□□□□ -0.36
CALCOCO2-219ENST00000511697 APAF1O14727 1248 aa12.82□□□□□ -0.36
CALCOCO2-219ENST00000511697 RIMBP2O15034 1052 aa12.82□□□□□ -0.36
CALCOCO2-219ENST00000511697 CELF2O95319 508 aaKnown RBP12.82□□□□□ -0.36
CALCOCO2-219ENST00000511697 HSPA8P11142 646 aaKnown RBP12.82□□□□□ -0.36
CALCOCO2-219ENST00000511697 HIRAP54198 1017 aaPredicted RBP12.82□□□□□ -0.36
CALCOCO2-219ENST00000511697 GOLGA2Q08379 1002 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms