RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 NUDT8Q8WV74 236 aa6.07□□□□□ -1.44
CHD1-207ENST00000511628 SUV39H2Q9H5I1 410 aa6.07□□□□□ -1.44
CHD1-207ENST00000511628 STIM2Q9P246 746 aa6.07□□□□□ -1.44
CHD1-207ENST00000511628 FNDC3AQ9Y2H6 1198 aaKnown RBP6.07□□□□□ -1.44
CHD1-207ENST00000511628 MSTNO14793 375 aa6.06□□□□□ -1.44
CHD1-207ENST00000511628 OPLAHO14841 1288 aa6.06□□□□□ -1.44
CHD1-207ENST00000511628 APBA3O96018 575 aa6.06□□□□□ -1.44
CHD1-207ENST00000511628 ALBP02768 609 aa6.06□□□□□ -1.44
CHD1-207ENST00000511628 CPB1P15086 417 aa6.06□□□□□ -1.44
CHD1-207ENST00000511628 PCSK2P16519 638 aa6.06□□□□□ -1.44
CHD1-207ENST00000511628 MLLT1Q03111 559 aaPredicted RBP6.06□□□□□ -1.44
CHD1-207ENST00000511628 TRIM28Q13263 835 aaKnown RBP6.06□□□□□ -1.44
CHD1-207ENST00000511628 PSAPL1Q6NUJ1 521 aa6.06□□□□□ -1.44
CHD1-207ENST00000511628 DHX32Q7L7V1 743 aaKnown RBP6.06□□□□□ -1.44
CHD1-207ENST00000511628 MICALL1Q8N3F8 863 aa6.06□□□□□ -1.44
CHD1-207ENST00000511628 RBSNQ9H1K0 784 aa6.06□□□□□ -1.44
CHD1-207ENST00000511628 C11orf16Q9NQ32 467 aa6.06□□□□□ -1.44
CHD1-207ENST00000511628 UBAP1LF5GYI3 381 aa6.05□□□□□ -1.44
CHD1-207ENST00000511628 MAP3K6O95382 1288 aa6.05□□□□□ -1.44
CHD1-207ENST00000511628 ZAP70P43403 619 aa6.05□□□□□ -1.44
CHD1-207ENST00000511628 PLA2G4EQ3MJ16 856 aa6.05□□□□□ -1.44
CHD1-207ENST00000511628 B4GALNT3Q6L9W6 998 aa6.05□□□□□ -1.44
CHD1-207ENST00000511628 ELMSAN1Q6PJG2 1045 aa6.05□□□□□ -1.44
CHD1-207ENST00000511628 ETFBKMTQ8IXQ9 262 aa6.05□□□□□ -1.44
CHD1-207ENST00000511628 GPR152Q8TDT2 470 aa6.05□□□□□ -1.44
CHD1-207ENST00000511628 SEPT3Q9UH03 358 aa6.05□□□□□ -1.44
CHD1-207ENST00000511628 GHRHP01286 108 aa6.04□□□□□ -1.44
CHD1-207ENST00000511628 EIF2AK2P19525 551 aaKnown RBP6.04□□□□□ -1.44
CHD1-207ENST00000511628 COL8A1P27658 744 aa6.04□□□□□ -1.44
CHD1-207ENST00000511628 RAC1P63000 192 aa6.04□□□□□ -1.44
CHD1-207ENST00000511628 TTC39BQ5VTQ0 682 aaPredicted RBP6.04□□□□□ -1.44
CHD1-207ENST00000511628 C8orf86Q6ZUL3 223 aa6.04□□□□□ -1.44
CHD1-207ENST00000511628 TRIM11Q96F44 468 aa6.04□□□□□ -1.44
CHD1-207ENST00000511628 SPATA31C1P0DKV0 1188 aa6.03□□□□□ -1.44
CHD1-207ENST00000511628 HOXB4P17483 251 aaPredicted RBP6.03□□□□□ -1.44
CHD1-207ENST00000511628 PLAURQ03405 335 aa6.03□□□□□ -1.44
CHD1-207ENST00000511628 HFE2Q6ZVN8 426 aa6.03□□□□□ -1.44
CHD1-207ENST00000511628 ZFATQ9P243 1243 aa6.03□□□□□ -1.44
CHD1-207ENST00000511628 STARD13Q9Y3M8 1113 aa6.03□□□□□ -1.44
CHD1-207ENST00000511628 KRBA1A5PL33 1030 aa6.02□□□□□ -1.45
CHD1-207ENST00000511628 TNFRSF10BO14763 440 aa6.02□□□□□ -1.45
CHD1-207ENST00000511628 ABL1P00519 1130 aa6.02□□□□□ -1.45
CHD1-207ENST00000511628 RPLP1P05386 114 aaKnown RBP6.02□□□□□ -1.45
CHD1-207ENST00000511628 NLRP13Q86W25 1043 aa6.02□□□□□ -1.45
CHD1-207ENST00000511628 HELQQ8TDG4 1101 aa6.02□□□□□ -1.45
CHD1-207ENST00000511628 GTF3C2Q8WUA4 911 aaPredicted RBP6.02□□□□□ -1.45
CHD1-207ENST00000511628 SPACA7Q96KW9 195 aa6.02□□□□□ -1.45
CHD1-207ENST00000511628 NSUN5Q96P11 429 aaKnown RBP6.02□□□□□ -1.45
CHD1-207ENST00000511628 MDFIQ99750 246 aa6.02□□□□□ -1.45
CHD1-207ENST00000511628 PRDM6Q9NQX0 595 aa6.02□□□□□ -1.45
CHD1-207ENST00000511628 TLR7Q9NYK1 1049 aaKnown RBP6.02□□□□□ -1.45
CHD1-207ENST00000511628 FAM229AH3BQW9 127 aa6.01□□□□□ -1.45
CHD1-207ENST00000511628 MMP20O60882 483 aa6.01□□□□□ -1.45
CHD1-207ENST00000511628 EGFRP00533 1210 aa6.01□□□□□ -1.45
CHD1-207ENST00000511628 GRNP28799 593 aaKnown RBP6.01□□□□□ -1.45
CHD1-207ENST00000511628 SCNN1AP37088 669 aa6.01□□□□□ -1.45
CHD1-207ENST00000511628 NRLP54845 237 aa6.01□□□□□ -1.45
CHD1-207ENST00000511628 GPLD1P80108 840 aa6.01□□□□□ -1.45
CHD1-207ENST00000511628 DNM1Q05193 864 aaKnown RBP6.01□□□□□ -1.45
CHD1-207ENST00000511628 PDE4CQ08493 712 aa6.01□□□□□ -1.45
CHD1-207ENST00000511628 NOM1Q5C9Z4 860 aaKnown RBP6.01□□□□□ -1.45
CHD1-207ENST00000511628 TRPM4Q8TD43 1214 aa6.01□□□□□ -1.45
CHD1-207ENST00000511628 NACC1Q96RE7 527 aa6.01□□□□□ -1.45
CHD1-207ENST00000511628 SMG9Q9H0W8 520 aaKnown RBP6.01□□□□□ -1.45
CHD1-207ENST00000511628 SLAIN2Q9P270 581 aa6.01□□□□□ -1.45
CHD1-207ENST00000511628 KCNMB2Q9Y691 235 aa6.01□□□□□ -1.45
CHD1-207ENST00000511628 LOC102724428A0A0B4J2F2 783 aa6□□□□□ -1.45
CHD1-207ENST00000511628 CARNS1A5YM72 827 aa6□□□□□ -1.45
CHD1-207ENST00000511628 TMEM88BA6NKF7 163 aa6□□□□□ -1.45
CHD1-207ENST00000511628 FAM177BA6PVY3 158 aa6□□□□□ -1.45
CHD1-207ENST00000511628 SSFA2P28290 1259 aa6□□□□□ -1.45
CHD1-207ENST00000511628 SIK1P57059 783 aa6□□□□□ -1.45
CHD1-207ENST00000511628 C8orf34Q49A92 452 aa6□□□□□ -1.45
CHD1-207ENST00000511628 ALKBH2Q6NS38 261 aa6□□□□□ -1.45
CHD1-207ENST00000511628 ZNF438Q7Z4V0 828 aa6□□□□□ -1.45
CHD1-207ENST00000511628 WFDC8Q8IUA0 241 aa6□□□□□ -1.45
CHD1-207ENST00000511628 DMRTC2Q8IXT2 367 aaPredicted RBP6□□□□□ -1.45
CHD1-207ENST00000511628 SPOCK3Q9BQ16 436 aa6□□□□□ -1.45
CHD1-207ENST00000511628 USTQ9Y2C2 406 aa6□□□□□ -1.45
CHD1-207ENST00000511628 C1QTNF9BB2RNN3 333 aa5.99□□□□□ -1.45
CHD1-207ENST00000511628 J3QW42 95 aa5.99□□□□□ -1.45
CHD1-207ENST00000511628 ZBTB39O15060 712 aa5.99□□□□□ -1.45
CHD1-207ENST00000511628 AFF1P51825 1210 aaKnown RBP5.99□□□□□ -1.45
CHD1-207ENST00000511628 HYAL2Q12891 473 aa5.99□□□□□ -1.45
CHD1-207ENST00000511628 PERM1Q5SV97 790 aa5.99□□□□□ -1.45
CHD1-207ENST00000511628 GDF6Q6KF10 455 aaPredicted RBP5.99□□□□□ -1.45
CHD1-207ENST00000511628 C20orf204Q6ZNR8 217 aa5.99□□□□□ -1.45
CHD1-207ENST00000511628 ATCAYQ86WG3 371 aa5.99□□□□□ -1.45
CHD1-207ENST00000511628 EDEM1Q92611 657 aa5.99□□□□□ -1.45
CHD1-207ENST00000511628 NUDT16Q96DE0 195 aaKnown RBP5.99□□□□□ -1.45
CHD1-207ENST00000511628 FRRS1LQ9P0K9 344 aa5.99□□□□□ -1.45
CHD1-207ENST00000511628 NAGPAQ9UK23 515 aa5.99□□□□□ -1.45
CHD1-207ENST00000511628 ZBTB42B2RXF5 422 aa5.98□□□□□ -1.45
CHD1-207ENST00000511628 FAM13AO94988 1023 aa5.98□□□□□ -1.45
CHD1-207ENST00000511628 NID1P14543 1247 aa5.98□□□□□ -1.45
CHD1-207ENST00000511628 MPSTP25325 297 aa5.98□□□□□ -1.45
CHD1-207ENST00000511628 MTMR3Q13615 1198 aa5.98□□□□□ -1.45
CHD1-207ENST00000511628 TRIP4Q15650 581 aaPredicted RBP5.98□□□□□ -1.45
CHD1-207ENST00000511628 FAM26DQ5JW98 314 aa5.98□□□□□ -1.45
CHD1-207ENST00000511628 NCAPG2Q86XI2 1143 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms