RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 CTSWP56202 376 aa9.05□□□□□ -0.96
PDLIM5-215ENST00000511586 RASSF7Q02833 373 aa9.05□□□□□ -0.96
PDLIM5-215ENST00000511586 C9orf131Q5VYM1 1079 aa9.05□□□□□ -0.96
PDLIM5-215ENST00000511586 ARHGAP45Q92619 1136 aa9.05□□□□□ -0.96
PDLIM5-215ENST00000511586 API5Q9BZZ5 524 aaKnown RBP9.05□□□□□ -0.96
PDLIM5-215ENST00000511586 TAOK3Q9H2K8 898 aa9.05□□□□□ -0.96
PDLIM5-215ENST00000511586 C9orf78Q9NZ63 289 aaPredicted RBP9.05□□□□□ -0.96
PDLIM5-215ENST00000511586 ATP6V0A2Q9Y487 856 aa9.05□□□□□ -0.96
PDLIM5-215ENST00000511586 SLX4Q8IY92 1834 aa9.05□□□□□ -0.96
PDLIM5-215ENST00000511586 LTBP3Q9NS15 1303 aa9.05□□□□□ -0.96
PDLIM5-215ENST00000511586 BCAR3O75815 825 aa9.04□□□□□ -0.96
PDLIM5-215ENST00000511586 LMNB1P20700 586 aa9.04□□□□□ -0.96
PDLIM5-215ENST00000511586 RPS8P62241 208 aaKnown RBP9.04□□□□□ -0.96
PDLIM5-215ENST00000511586 FKBP4Q02790 459 aaKnown RBP eCLIP9.04□□□□□ -0.96
PDLIM5-215ENST00000511586 OLFM4Q6UX06 510 aa9.04□□□□□ -0.96
PDLIM5-215ENST00000511586 TMC4Q7Z404 712 aa9.04□□□□□ -0.96
PDLIM5-215ENST00000511586 SP8Q8IXZ3 490 aa9.04□□□□□ -0.96
PDLIM5-215ENST00000511586 TTLL11Q8NHH1 800 aa9.04□□□□□ -0.96
PDLIM5-215ENST00000511586 PLA2G12BQ9BX93 195 aa9.04□□□□□ -0.96
PDLIM5-215ENST00000511586 RNF181Q9P0P0 153 aa9.04□□□□□ -0.96
PDLIM5-215ENST00000511586 CHD4Q14839 1912 aa9.03□□□□□ -0.96
PDLIM5-215ENST00000511586 CSF1RP07333 972 aa9.03□□□□□ -0.96
PDLIM5-215ENST00000511586 CCT4P50991 539 aaKnown RBP9.03□□□□□ -0.96
PDLIM5-215ENST00000511586 FRAT1Q92837 279 aaPredicted RBP9.03□□□□□ -0.96
PDLIM5-215ENST00000511586 CELF1Q92879 486 aaKnown RBP9.03□□□□□ -0.96
PDLIM5-215ENST00000511586 CCDC85AQ96PX6 553 aaPredicted RBP9.03□□□□□ -0.96
PDLIM5-215ENST00000511586 CDC5LQ99459 802 aaKnown RBP9.03□□□□□ -0.96
PDLIM5-215ENST00000511586 PSMD1Q99460 953 aa9.03□□□□□ -0.96
PDLIM5-215ENST00000511586 SEC31BQ9NQW1 1179 aa9.03□□□□□ -0.96
PDLIM5-215ENST00000511586 PRELPP51888 382 aa9.02□□□□□ -0.97
PDLIM5-215ENST00000511586 FOXO4P98177 505 aa9.02□□□□□ -0.97
PDLIM5-215ENST00000511586 ATF7IPQ6VMQ6 1270 aa9.02□□□□□ -0.97
PDLIM5-215ENST00000511586 ANKRD18AQ8IVF6 992 aa9.02□□□□□ -0.97
PDLIM5-215ENST00000511586 ZNF784Q8NCA9 323 aaPredicted RBP9.02□□□□□ -0.97
PDLIM5-215ENST00000511586 GREM2Q9H772 168 aa9.02□□□□□ -0.97
PDLIM5-215ENST00000511586 ZNF277Q9NRM2 450 aaPredicted RBP9.02□□□□□ -0.97
PDLIM5-215ENST00000511586 DDX60Q8IY21 1712 aaKnown RBP9.02□□□□□ -0.97
PDLIM5-215ENST00000511586 UTYO14607 1347 aa9.02□□□□□ -0.97
PDLIM5-215ENST00000511586 RTL9Q8NET4 1388 aa9.01□□□□□ -0.97
PDLIM5-215ENST00000511586 NBPF7P0C2Y1 421 aaPredicted RBP9.01□□□□□ -0.97
PDLIM5-215ENST00000511586 ITGA6P23229 1130 aa9.01□□□□□ -0.97
PDLIM5-215ENST00000511586 IARSP41252 1262 aaKnown RBP9.01□□□□□ -0.97
PDLIM5-215ENST00000511586 ZKSCAN2Q63HK3 967 aa9.01□□□□□ -0.97
PDLIM5-215ENST00000511586 LMBR1LQ6UX01 489 aa9.01□□□□□ -0.97
PDLIM5-215ENST00000511586 DPP8Q6V1X1 898 aaPredicted RBP9.01□□□□□ -0.97
PDLIM5-215ENST00000511586 MPNDQ8N594 471 aa9.01□□□□□ -0.97
PDLIM5-215ENST00000511586 SUPT20HQ8NEM7 779 aa9.01□□□□□ -0.97
PDLIM5-215ENST00000511586 USP44Q9H0E7 712 aa9.01□□□□□ -0.97
PDLIM5-215ENST00000511586 VPS33BQ9H267 617 aa9.01□□□□□ -0.97
PDLIM5-215ENST00000511586 LAMB2P55268 1798 aa9.01□□□□□ -0.97
PDLIM5-215ENST00000511586 ZC3H4Q9UPT8 1303 aaKnown RBP9.01□□□□□ -0.97
PDLIM5-215ENST00000511586 CACNA1SQ13698 1873 aa9□□□□□ -0.97
PDLIM5-215ENST00000511586 SNED1Q8TER0 1413 aa9□□□□□ -0.97
PDLIM5-215ENST00000511586 ANKRD18BA2A2Z9 1011 aa9□□□□□ -0.97
PDLIM5-215ENST00000511586 TRIM27P14373 513 aa9□□□□□ -0.97
PDLIM5-215ENST00000511586 IGHMBP2P38935 993 aaKnown RBP9□□□□□ -0.97
PDLIM5-215ENST00000511586 IFIT5Q13325 482 aaKnown RBP9□□□□□ -0.97
PDLIM5-215ENST00000511586 CCDC57Q2TAC2 916 aa9□□□□□ -0.97
PDLIM5-215ENST00000511586 FAM161AQ3B820 660 aa9□□□□□ -0.97
PDLIM5-215ENST00000511586 EPHA10Q5JZY3 1008 aa9□□□□□ -0.97
PDLIM5-215ENST00000511586 INTS3Q68E01 1043 aaKnown RBP9□□□□□ -0.97
PDLIM5-215ENST00000511586 SLC51AQ86UW1 340 aa9□□□□□ -0.97
PDLIM5-215ENST00000511586 SUCLG2Q96I99 432 aa9□□□□□ -0.97
PDLIM5-215ENST00000511586 RTFDC1Q9BY42 306 aaPredicted RBP9□□□□□ -0.97
PDLIM5-215ENST00000511586 BSDC1Q9NW68 430 aaPredicted RBP9□□□□□ -0.97
PDLIM5-215ENST00000511586 NSFL1CQ9UNZ2 370 aaKnown RBP9□□□□□ -0.97
PDLIM5-215ENST00000511586 HDAC5Q9UQL6 1122 aa9□□□□□ -0.97
PDLIM5-215ENST00000511586 CHMP3Q9Y3E7 222 aa9□□□□□ -0.97
PDLIM5-215ENST00000511586 FER1L6Q2WGJ9 1857 aa9□□□□□ -0.97
PDLIM5-215ENST00000511586 UBTFL1P0CB47 393 aaPredicted RBP8.99□□□□□ -0.97
PDLIM5-215ENST00000511586 GPSM2P81274 684 aa8.99□□□□□ -0.97
PDLIM5-215ENST00000511586 DPY19L2Q6NUT2 758 aa8.99□□□□□ -0.97
PDLIM5-215ENST00000511586 LARGE2Q8N3Y3 721 aa8.99□□□□□ -0.97
PDLIM5-215ENST00000511586 ZNF526Q8TF50 670 aaPredicted RBP8.99□□□□□ -0.97
PDLIM5-215ENST00000511586 JDP2Q8WYK2 163 aa8.99□□□□□ -0.97
PDLIM5-215ENST00000511586 CLUAP1Q96AJ1 413 aa8.99□□□□□ -0.97
PDLIM5-215ENST00000511586 KAZALD1Q96I82 304 aa8.99□□□□□ -0.97
PDLIM5-215ENST00000511586 MPHOSPH8Q99549 860 aa8.99□□□□□ -0.97
PDLIM5-215ENST00000511586 BICC1Q9H694 974 aaKnown RBP8.99□□□□□ -0.97
PDLIM5-215ENST00000511586 GPBP1L1Q9HC44 474 aaPredicted RBP8.99□□□□□ -0.97
PDLIM5-215ENST00000511586 RCAN3Q9UKA8 241 aa8.99□□□□□ -0.97
PDLIM5-215ENST00000511586 GLTPD2A6NH11 291 aa8.98□□□□□ -0.97
PDLIM5-215ENST00000511586 C6orf229H3BNL8 230 aa8.98□□□□□ -0.97
PDLIM5-215ENST00000511586 PPIP5K2O43314 1243 aa8.98□□□□□ -0.97
PDLIM5-215ENST00000511586 AOC3Q16853 763 aa8.98□□□□□ -0.97
PDLIM5-215ENST00000511586 RABL6Q3YEC7 729 aaPredicted RBP8.98□□□□□ -0.97
PDLIM5-215ENST00000511586 TAF7LQ5H9L4 462 aa8.98□□□□□ -0.97
PDLIM5-215ENST00000511586 FTSJ3Q8IY81 847 aaKnown RBP8.98□□□□□ -0.97
PDLIM5-215ENST00000511586 PODXL2Q9NZ53 605 aa8.98□□□□□ -0.97
PDLIM5-215ENST00000511586 ANKIB1Q9P2G1 1089 aa8.98□□□□□ -0.97
PDLIM5-215ENST00000511586 MINPP1Q9UNW1 487 aa8.98□□□□□ -0.97
PDLIM5-215ENST00000511586 TNNQ9UQP3 1299 aa8.98□□□□□ -0.97
PDLIM5-215ENST00000511586 KDM2BQ8NHM5 1336 aa8.98□□□□□ -0.97
PDLIM5-215ENST00000511586 SBF1O95248 1867 aa8.98□□□□□ -0.97
PDLIM5-215ENST00000511586 FZD9O00144 591 aa8.97□□□□□ -0.97
PDLIM5-215ENST00000511586 GNAI3P08754 354 aa8.97□□□□□ -0.97
PDLIM5-215ENST00000511586 ATP2B4P23634 1241 aa8.97□□□□□ -0.97
PDLIM5-215ENST00000511586 KIAA2012Q0VF49 1180 aa8.97□□□□□ -0.97
PDLIM5-215ENST00000511586 WASHC4Q2M389 1173 aa8.97□□□□□ -0.97
PDLIM5-215ENST00000511586 LDHAL6AQ6ZMR3 332 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms