RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 C8orf86Q6ZUL3 223 aa6.77□□□□□ -1.33
TOPBP1-208ENST00000511439 VTI1AQ96AJ9 217 aa6.77□□□□□ -1.33
TOPBP1-208ENST00000511439 IGFLR1Q9H665 355 aa6.77□□□□□ -1.33
TOPBP1-208ENST00000511439 JPH1Q9HDC5 661 aaPredicted RBP6.77□□□□□ -1.33
TOPBP1-208ENST00000511439 ELNP15502 786 aa6.76□□□□□ -1.33
TOPBP1-208ENST00000511439 ARID4AP29374 1257 aaPredicted RBP6.76□□□□□ -1.33
TOPBP1-208ENST00000511439 NRG1Q02297 640 aaPredicted RBP6.76□□□□□ -1.33
TOPBP1-208ENST00000511439 Q8N3U1 123 aa6.76□□□□□ -1.33
TOPBP1-208ENST00000511439 DNAJB12Q9NXW2 375 aaKnown RBP6.76□□□□□ -1.33
TOPBP1-208ENST00000511439 FAM229AH3BQW9 127 aa6.75□□□□□ -1.33
TOPBP1-208ENST00000511439 RGS9O75916 674 aaPredicted RBP6.75□□□□□ -1.33
TOPBP1-208ENST00000511439 MAP3K6O95382 1288 aa6.75□□□□□ -1.33
TOPBP1-208ENST00000511439 ARSDP51689 593 aa6.75□□□□□ -1.33
TOPBP1-208ENST00000511439 SRPK2P78362 688 aaKnown RBP6.75□□□□□ -1.33
TOPBP1-208ENST00000511439 PSAPL1Q6NUJ1 521 aa6.75□□□□□ -1.33
TOPBP1-208ENST00000511439 DMGDHQ9UI17 866 aaKnown RBP6.75□□□□□ -1.33
TOPBP1-208ENST00000511439 A0A0A0MRY4 1105 aa6.74□□□□□ -1.33
TOPBP1-208ENST00000511439 NFKB1P19838 968 aa6.74□□□□□ -1.33
TOPBP1-208ENST00000511439 RFX1P22670 979 aa6.74□□□□□ -1.33
TOPBP1-208ENST00000511439 IDH3AP50213 366 aa6.74□□□□□ -1.33
TOPBP1-208ENST00000511439 GRIK4Q16099 956 aa6.74□□□□□ -1.33
TOPBP1-208ENST00000511439 RSPO4Q2I0M5 234 aaPredicted RBP6.74□□□□□ -1.33
TOPBP1-208ENST00000511439 FAM200AQ8TCP9 573 aa6.74□□□□□ -1.33
TOPBP1-208ENST00000511439 MYO19Q96H55 970 aa6.74□□□□□ -1.33
TOPBP1-208ENST00000511439 TPSG1Q9NRR2 321 aa6.74□□□□□ -1.33
TOPBP1-208ENST00000511439 BCS1LQ9Y276 419 aa6.74□□□□□ -1.33
TOPBP1-208ENST00000511439 DCAF1Q9Y4B6 1507 aa6.74□□□□□ -1.33
TOPBP1-208ENST00000511439 WEE1P30291 646 aa6.73□□□□□ -1.33
TOPBP1-208ENST00000511439 INPP5BP32019 993 aa6.73□□□□□ -1.33
TOPBP1-208ENST00000511439 DGKZQ13574 1117 aa6.73□□□□□ -1.33
TOPBP1-208ENST00000511439 C11orf91Q3C1V1 193 aa6.73□□□□□ -1.33
TOPBP1-208ENST00000511439 NKAPLQ5M9Q1 402 aa6.73□□□□□ -1.33
TOPBP1-208ENST00000511439 NUDT8Q8WV74 236 aa6.73□□□□□ -1.33
TOPBP1-208ENST00000511439 ARXQ96QS3 562 aa6.73□□□□□ -1.33
TOPBP1-208ENST00000511439 FRRS1LQ9P0K9 344 aa6.73□□□□□ -1.33
TOPBP1-208ENST00000511439 ATAD2BQ9ULI0 1458 aa6.73□□□□□ -1.33
TOPBP1-208ENST00000511439 AFF1P51825 1210 aaKnown RBP6.72□□□□□ -1.33
TOPBP1-208ENST00000511439 ADGRE1Q14246 886 aa6.72□□□□□ -1.33
TOPBP1-208ENST00000511439 ZMYM1Q5SVZ6 1142 aa6.72□□□□□ -1.33
TOPBP1-208ENST00000511439 FAM35AQ86V20 835 aa6.72□□□□□ -1.33
TOPBP1-208ENST00000511439 DTWD1Q8N5C7 304 aa6.72□□□□□ -1.33
TOPBP1-208ENST00000511439 PBXIP1Q96AQ6 731 aa6.72□□□□□ -1.33
TOPBP1-208ENST00000511439 LENG1Q96BZ8 264 aaPredicted RBP6.72□□□□□ -1.33
TOPBP1-208ENST00000511439 KLK14Q9P0G3 267 aa6.72□□□□□ -1.33
TOPBP1-208ENST00000511439 RSF1Q96T23 1441 aaPredicted RBP6.71□□□□□ -1.34
TOPBP1-208ENST00000511439 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.71□□□□□ -1.34
TOPBP1-208ENST00000511439 DYRK3O43781 588 aa6.71□□□□□ -1.34
TOPBP1-208ENST00000511439 PPP1R15AO75807 674 aaPredicted RBP6.71□□□□□ -1.34
TOPBP1-208ENST00000511439 MICAL2O94851 1124 aa6.71□□□□□ -1.34
TOPBP1-208ENST00000511439 TXNRD3Q86VQ6 643 aa6.71□□□□□ -1.34
TOPBP1-208ENST00000511439 QTRT2Q9H974 415 aaKnown RBP6.71□□□□□ -1.34
TOPBP1-208ENST00000511439 NAGPAQ9UK23 515 aa6.71□□□□□ -1.34
TOPBP1-208ENST00000511439 RARAP10276 462 aa6.7□□□□□ -1.34
TOPBP1-208ENST00000511439 SELPP16109 830 aa6.7□□□□□ -1.34
TOPBP1-208ENST00000511439 MBTPS1Q14703 1052 aa6.7□□□□□ -1.34
TOPBP1-208ENST00000511439 ILDR2Q71H61 639 aa6.7□□□□□ -1.34
TOPBP1-208ENST00000511439 DHX32Q7L7V1 743 aaKnown RBP6.7□□□□□ -1.34
TOPBP1-208ENST00000511439 FMR1NBQ8N0W7 255 aaPredicted RBP6.7□□□□□ -1.34
TOPBP1-208ENST00000511439 TRPM4Q8TD43 1214 aa6.7□□□□□ -1.34
TOPBP1-208ENST00000511439 TTC9Q92623 222 aa6.7□□□□□ -1.34
TOPBP1-208ENST00000511439 LGR5O75473 907 aa6.69□□□□□ -1.34
TOPBP1-208ENST00000511439 H2AFB1P0C5Y9 115 aa6.69□□□□□ -1.34
TOPBP1-208ENST00000511439 H2AFB2P0C5Z0 115 aa6.69□□□□□ -1.34
TOPBP1-208ENST00000511439 ITGB7P26010 798 aa6.69□□□□□ -1.34
TOPBP1-208ENST00000511439 GPLD1P80108 840 aa6.69□□□□□ -1.34
TOPBP1-208ENST00000511439 SWI5Q1ZZU3 235 aa6.69□□□□□ -1.34
TOPBP1-208ENST00000511439 MSL1Q68DK7 614 aa6.69□□□□□ -1.34
TOPBP1-208ENST00000511439 ELMSAN1Q6PJG2 1045 aa6.69□□□□□ -1.34
TOPBP1-208ENST00000511439 DMRTC2Q8IXT2 367 aaPredicted RBP6.69□□□□□ -1.34
TOPBP1-208ENST00000511439 HECW2Q9P2P5 1572 aa6.69□□□□□ -1.34
TOPBP1-208ENST00000511439 EGFRP00533 1210 aa6.68□□□□□ -1.34
TOPBP1-208ENST00000511439 CPB1P15086 417 aa6.68□□□□□ -1.34
TOPBP1-208ENST00000511439 NRLP54845 237 aa6.68□□□□□ -1.34
TOPBP1-208ENST00000511439 CDCA8Q53HL2 280 aa6.68□□□□□ -1.34
TOPBP1-208ENST00000511439 KRT25Q7Z3Z0 450 aa6.68□□□□□ -1.34
TOPBP1-208ENST00000511439 IFT43Q96FT9 208 aa6.68□□□□□ -1.34
TOPBP1-208ENST00000511439 LPIN3Q9BQK8 851 aa6.68□□□□□ -1.34
TOPBP1-208ENST00000511439 USP21Q9UK80 565 aa6.68□□□□□ -1.34
TOPBP1-208ENST00000511439 DISP3Q9P2K9 1392 aa6.68□□□□□ -1.34
TOPBP1-208ENST00000511439 ATG7O95352 703 aa6.67□□□□□ -1.34
TOPBP1-208ENST00000511439 TARSP26639 723 aaKnown RBP6.67□□□□□ -1.34
TOPBP1-208ENST00000511439 GRNP28799 593 aaKnown RBP6.67□□□□□ -1.34
TOPBP1-208ENST00000511439 WFDC8Q8IUA0 241 aa6.67□□□□□ -1.34
TOPBP1-208ENST00000511439 DCAF11Q8TEB1 546 aa6.67□□□□□ -1.34
TOPBP1-208ENST00000511439 ZFATQ9P243 1243 aa6.67□□□□□ -1.34
TOPBP1-208ENST00000511439 NOVA2Q9UNW9 492 aaKnown RBP6.67□□□□□ -1.34
TOPBP1-208ENST00000511439 RTCBQ9Y3I0 505 aaKnown RBP6.67□□□□□ -1.34
TOPBP1-208ENST00000511439 ACIN1Q9UKV3 1341 aaKnown RBP6.67□□□□□ -1.34
TOPBP1-208ENST00000511439 SCO2A0A1W2PP80 73 aa6.66□□□□□ -1.34
TOPBP1-208ENST00000511439 SASH3O75995 380 aa6.66□□□□□ -1.34
TOPBP1-208ENST00000511439 ELOAQ14241 798 aaKnown RBP6.66□□□□□ -1.34
TOPBP1-208ENST00000511439 PERM1Q5SV97 790 aa6.66□□□□□ -1.34
TOPBP1-208ENST00000511439 FBXO11Q86XK2 927 aa6.66□□□□□ -1.34
TOPBP1-208ENST00000511439 RBSNQ9H1K0 784 aa6.66□□□□□ -1.34
TOPBP1-208ENST00000511439 TLR7Q9NYK1 1049 aaKnown RBP6.66□□□□□ -1.34
TOPBP1-208ENST00000511439 XYLBO75191 536 aa6.65□□□□□ -1.34
TOPBP1-208ENST00000511439 PSAPP07602 524 aa6.65□□□□□ -1.34
TOPBP1-208ENST00000511439 PLAURQ03405 335 aa6.65□□□□□ -1.34
TOPBP1-208ENST00000511439 PRSS36Q5K4E3 855 aa6.65□□□□□ -1.34
TOPBP1-208ENST00000511439 SHISA2Q6UWI4 295 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms