RNA–Protein interactions for RNA: ENST00000511424.5

LIMCH1-212, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 3

Gene LIMCH1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-212ENST00000511424 DMGDHQ9UI17 866 aaKnown RBP5.11□□□□□ -1.59
LIMCH1-212ENST00000511424 FAM229AH3BQW9 127 aa5.1□□□□□ -1.59
LIMCH1-212ENST00000511424 SPATA31C1P0DKV0 1188 aa5.1□□□□□ -1.59
LIMCH1-212ENST00000511424 ELMSAN1Q6PJG2 1045 aa5.1□□□□□ -1.59
LIMCH1-212ENST00000511424 CAPN12Q6ZSI9 719 aa5.1□□□□□ -1.59
LIMCH1-212ENST00000511424 DHX32Q7L7V1 743 aaKnown RBP5.1□□□□□ -1.59
LIMCH1-212ENST00000511424 TTC16Q8NEE8 873 aa5.1□□□□□ -1.59
LIMCH1-212ENST00000511424 CLP1Q92989 425 aaKnown RBP5.1□□□□□ -1.59
LIMCH1-212ENST00000511424 SPOCK3Q9BQ16 436 aa5.1□□□□□ -1.59
LIMCH1-212ENST00000511424 FAM13BQ9NYF5 915 aa5.1□□□□□ -1.59
LIMCH1-212ENST00000511424 OPLAHO14841 1288 aa5.09□□□□□ -1.59
LIMCH1-212ENST00000511424 PPP1R15AO75807 674 aaPredicted RBP5.09□□□□□ -1.59
LIMCH1-212ENST00000511424 PSAPP07602 524 aa5.09□□□□□ -1.59
LIMCH1-212ENST00000511424 EIF2AK2P19525 551 aaKnown RBP5.09□□□□□ -1.59
LIMCH1-212ENST00000511424 AAMPQ13685 434 aa5.09□□□□□ -1.59
LIMCH1-212ENST00000511424 HFE2Q6ZVN8 426 aa5.09□□□□□ -1.59
LIMCH1-212ENST00000511424 ETFBKMTQ8IXQ9 262 aa5.09□□□□□ -1.59
LIMCH1-212ENST00000511424 PIK3R5Q8WYR1 880 aa5.09□□□□□ -1.59
LIMCH1-212ENST00000511424 COL26A1Q96A83 441 aa5.09□□□□□ -1.59
LIMCH1-212ENST00000511424 RBSNQ9H1K0 784 aa5.09□□□□□ -1.59
LIMCH1-212ENST00000511424 STARD13Q9Y3M8 1113 aa5.09□□□□□ -1.59
LIMCH1-212ENST00000511424 C1QTNF9BB2RNN3 333 aa5.08□□□□□ -1.6
LIMCH1-212ENST00000511424 UBAP1LF5GYI3 381 aa5.08□□□□□ -1.6
LIMCH1-212ENST00000511424 GHRHP01286 108 aa5.08□□□□□ -1.6
LIMCH1-212ENST00000511424 RAC1P63000 192 aa5.08□□□□□ -1.6
LIMCH1-212ENST00000511424 ERICH6Q7L0X2 663 aa5.08□□□□□ -1.6
LIMCH1-212ENST00000511424 ABTB2Q8N961 1025 aa5.08□□□□□ -1.6
LIMCH1-212ENST00000511424 GPR152Q8TDT2 470 aa5.08□□□□□ -1.6
LIMCH1-212ENST00000511424 NSUN5Q96P11 429 aaKnown RBP5.08□□□□□ -1.6
LIMCH1-212ENST00000511424 ZFATQ9P243 1243 aa5.08□□□□□ -1.6
LIMCH1-212ENST00000511424 STIM2Q9P246 746 aa5.08□□□□□ -1.6
LIMCH1-212ENST00000511424 FNDC3AQ9Y2H6 1198 aaKnown RBP5.08□□□□□ -1.6
LIMCH1-212ENST00000511424 MAP3K6O95382 1288 aa5.07□□□□□ -1.6
LIMCH1-212ENST00000511424 ZAP70P43403 619 aa5.07□□□□□ -1.6
LIMCH1-212ENST00000511424 PLAURQ03405 335 aa5.07□□□□□ -1.6
LIMCH1-212ENST00000511424 CD163Q86VB7 1156 aa5.07□□□□□ -1.6
LIMCH1-212ENST00000511424 DMRTC2Q8IXT2 367 aaPredicted RBP5.07□□□□□ -1.6
LIMCH1-212ENST00000511424 NACC1Q96RE7 527 aa5.07□□□□□ -1.6
LIMCH1-212ENST00000511424 MDFIQ99750 246 aa5.07□□□□□ -1.6
LIMCH1-212ENST00000511424 C1orf115Q9H7X2 142 aa5.07□□□□□ -1.6
LIMCH1-212ENST00000511424 C11orf16Q9NQ32 467 aa5.07□□□□□ -1.6
LIMCH1-212ENST00000511424 SEPT3Q9UH03 358 aa5.07□□□□□ -1.6
LIMCH1-212ENST00000511424 NAGPAQ9UK23 515 aa5.07□□□□□ -1.6
LIMCH1-212ENST00000511424 MTMR7Q9Y216 660 aa5.07□□□□□ -1.6
LIMCH1-212ENST00000511424 SUPT5HO00267 1087 aaKnown RBP5.06□□□□□ -1.6
LIMCH1-212ENST00000511424 PCSK2P16519 638 aa5.06□□□□□ -1.6
LIMCH1-212ENST00000511424 GRNP28799 593 aaKnown RBP5.06□□□□□ -1.6
LIMCH1-212ENST00000511424 SCNN1AP37088 669 aa5.06□□□□□ -1.6
LIMCH1-212ENST00000511424 CHRNA4P43681 627 aa5.06□□□□□ -1.6
LIMCH1-212ENST00000511424 AFF1P51825 1210 aaKnown RBP5.06□□□□□ -1.6
LIMCH1-212ENST00000511424 GRIK4Q16099 956 aa5.06□□□□□ -1.6
LIMCH1-212ENST00000511424 PERM1Q5SV97 790 aa5.06□□□□□ -1.6
LIMCH1-212ENST00000511424 TTC39BQ5VTQ0 682 aaPredicted RBP5.06□□□□□ -1.6
LIMCH1-212ENST00000511424 C20orf204Q6ZNR8 217 aa5.06□□□□□ -1.6
LIMCH1-212ENST00000511424 SPACA7Q96KW9 195 aa5.06□□□□□ -1.6
LIMCH1-212ENST00000511424 SMG9Q9H0W8 520 aaKnown RBP5.06□□□□□ -1.6
LIMCH1-212ENST00000511424 PRDM6Q9NQX0 595 aa5.06□□□□□ -1.6
LIMCH1-212ENST00000511424 TLR7Q9NYK1 1049 aaKnown RBP5.06□□□□□ -1.6
LIMCH1-212ENST00000511424 J3QW42 95 aa5.05□□□□□ -1.6
LIMCH1-212ENST00000511424 MMP20O60882 483 aa5.05□□□□□ -1.6
LIMCH1-212ENST00000511424 NID1P14543 1247 aa5.05□□□□□ -1.6
LIMCH1-212ENST00000511424 GATA4P43694 442 aa5.05□□□□□ -1.6
LIMCH1-212ENST00000511424 BAG6P46379 1132 aa5.05□□□□□ -1.6
LIMCH1-212ENST00000511424 GPLD1P80108 840 aa5.05□□□□□ -1.6
LIMCH1-212ENST00000511424 GDF6Q6KF10 455 aaPredicted RBP5.05□□□□□ -1.6
LIMCH1-212ENST00000511424 NLRP13Q86W25 1043 aa5.05□□□□□ -1.6
LIMCH1-212ENST00000511424 WFDC8Q8IUA0 241 aa5.05□□□□□ -1.6
LIMCH1-212ENST00000511424 TRPM4Q8TD43 1214 aa5.05□□□□□ -1.6
LIMCH1-212ENST00000511424 USP21Q9UK80 565 aa5.05□□□□□ -1.6
LIMCH1-212ENST00000511424 KCNMB2Q9Y691 235 aa5.05□□□□□ -1.6
LIMCH1-212ENST00000511424 A0A0A0MRY4 1105 aa5.04□□□□□ -1.6
LIMCH1-212ENST00000511424 LOC102724428A0A0B4J2F2 783 aa5.04□□□□□ -1.6
LIMCH1-212ENST00000511424 FAM177BA6PVY3 158 aa5.04□□□□□ -1.6
LIMCH1-212ENST00000511424 ZBTB42B2RXF5 422 aa5.04□□□□□ -1.6
LIMCH1-212ENST00000511424 TNFRSF10BO14763 440 aa5.04□□□□□ -1.6
LIMCH1-212ENST00000511424 ABL1P00519 1130 aa5.04□□□□□ -1.6
LIMCH1-212ENST00000511424 EGFRP00533 1210 aa5.04□□□□□ -1.6
LIMCH1-212ENST00000511424 PROCP04070 461 aa5.04□□□□□ -1.6
LIMCH1-212ENST00000511424 ITGB2P05107 769 aa5.04□□□□□ -1.6
LIMCH1-212ENST00000511424 FURINP09958 794 aa5.04□□□□□ -1.6
LIMCH1-212ENST00000511424 NRLP54845 237 aa5.04□□□□□ -1.6
LIMCH1-212ENST00000511424 SIK1P57059 783 aa5.04□□□□□ -1.6
LIMCH1-212ENST00000511424 DNM1Q05193 864 aaKnown RBP5.04□□□□□ -1.6
LIMCH1-212ENST00000511424 C8orf34Q49A92 452 aa5.04□□□□□ -1.6
LIMCH1-212ENST00000511424 MSL1Q68DK7 614 aa5.04□□□□□ -1.6
LIMCH1-212ENST00000511424 SLAIN2Q9P270 581 aa5.04□□□□□ -1.6
LIMCH1-212ENST00000511424 CARNS1A5YM72 827 aa5.03□□□□□ -1.6
LIMCH1-212ENST00000511424 ZBTB39O15060 712 aa5.03□□□□□ -1.6
LIMCH1-212ENST00000511424 DOC2BQ14184 412 aa5.03□□□□□ -1.6
LIMCH1-212ENST00000511424 SUZ12Q15022 739 aaKnown RBP5.03□□□□□ -1.6
LIMCH1-212ENST00000511424 TRIP4Q15650 581 aaPredicted RBP5.03□□□□□ -1.6
LIMCH1-212ENST00000511424 NOM1Q5C9Z4 860 aaKnown RBP5.03□□□□□ -1.6
LIMCH1-212ENST00000511424 FAM26DQ5JW98 314 aa5.03□□□□□ -1.6
LIMCH1-212ENST00000511424 ZNF438Q7Z4V0 828 aa5.03□□□□□ -1.6
LIMCH1-212ENST00000511424 ATCAYQ86WG3 371 aa5.03□□□□□ -1.6
LIMCH1-212ENST00000511424 NCAPG2Q86XI2 1143 aa5.03□□□□□ -1.6
LIMCH1-212ENST00000511424 GTF3C2Q8WUA4 911 aaPredicted RBP5.03□□□□□ -1.6
LIMCH1-212ENST00000511424 PLD4Q96BZ4 506 aa5.03□□□□□ -1.6
LIMCH1-212ENST00000511424 NUDT16Q96DE0 195 aaKnown RBP5.03□□□□□ -1.6
LIMCH1-212ENST00000511424 LPIN3Q9BQK8 851 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms