RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 CCDC152Q4G0S7 254 aa16.23■□□□□ 0.19
COL6A6-203ENST00000511332 SOGA3Q5TF21 947 aa16.23■□□□□ 0.19
COL6A6-203ENST00000511332 DDX46Q7L014 1031 aaKnown RBP16.23■□□□□ 0.19
COL6A6-203ENST00000511332 CRAMP1Q96RY5 1269 aa16.23■□□□□ 0.19
COL6A6-203ENST00000511332 UTYO14607 1347 aa16.22■□□□□ 0.19
COL6A6-203ENST00000511332 CASP7P55210 303 aa16.22■□□□□ 0.19
COL6A6-203ENST00000511332 FTSJ3Q8IY81 847 aaKnown RBP16.22■□□□□ 0.19
COL6A6-203ENST00000511332 JARID2Q92833 1246 aaPredicted RBP16.22■□□□□ 0.19
COL6A6-203ENST00000511332 PLA2G12BQ9BX93 195 aa16.22■□□□□ 0.19
COL6A6-203ENST00000511332 RTL9Q8NET4 1388 aa16.22■□□□□ 0.19
COL6A6-203ENST00000511332 DICER1Q9UPY3 1922 aaKnown RBP16.21■□□□□ 0.19
COL6A6-203ENST00000511332 A0A1B0GUL6 1792 aa16.21■□□□□ 0.19
COL6A6-203ENST00000511332 INTS3Q68E01 1043 aaKnown RBP16.21■□□□□ 0.19
COL6A6-203ENST00000511332 TIAM2Q8IVF5 1701 aa16.21■□□□□ 0.19
COL6A6-203ENST00000511332 PPEF1O14829 653 aaPredicted RBP16.2■□□□□ 0.18
COL6A6-203ENST00000511332 MS4A1P11836 297 aa16.2■□□□□ 0.18
COL6A6-203ENST00000511332 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.2■□□□□ 0.18
COL6A6-203ENST00000511332 COL4A1P02462 1669 aa16.19■□□□□ 0.18
COL6A6-203ENST00000511332 GRAPQ13588 217 aa16.19■□□□□ 0.18
COL6A6-203ENST00000511332 TMC4Q7Z404 712 aa16.19■□□□□ 0.18
COL6A6-203ENST00000511332 DZIP1LQ8IYY4 767 aaKnown RBP16.19■□□□□ 0.18
COL6A6-203ENST00000511332 GRAPLQ8TC17 118 aaPredicted RBP16.19■□□□□ 0.18
COL6A6-203ENST00000511332 CLUAP1Q96AJ1 413 aa16.19■□□□□ 0.18
COL6A6-203ENST00000511332 LTBP1Q14766 1721 aa16.19■□□□□ 0.18
COL6A6-203ENST00000511332 C21orf2O43822 256 aa16.18■□□□□ 0.18
COL6A6-203ENST00000511332 NBPF7P0C2Y1 421 aaPredicted RBP16.18■□□□□ 0.18
COL6A6-203ENST00000511332 CCDC93Q567U6 631 aa16.18■□□□□ 0.18
COL6A6-203ENST00000511332 TTLL11Q8NHH1 800 aa16.18■□□□□ 0.18
COL6A6-203ENST00000511332 CDC5LQ99459 802 aaKnown RBP16.18■□□□□ 0.18
COL6A6-203ENST00000511332 TMX4Q9H1E5 349 aaPredicted RBP16.18■□□□□ 0.18
COL6A6-203ENST00000511332 HDAC5Q9UQL6 1122 aa16.18■□□□□ 0.18
COL6A6-203ENST00000511332 BBOX1O75936 387 aa16.17■□□□□ 0.18
COL6A6-203ENST00000511332 UBTFL1P0CB47 393 aaPredicted RBP16.17■□□□□ 0.18
COL6A6-203ENST00000511332 GRIPAP1Q4V328 841 aa16.17■□□□□ 0.18
COL6A6-203ENST00000511332 CC2D2BQ6DHV5 1058 aa16.17■□□□□ 0.18
COL6A6-203ENST00000511332 USP44Q9H0E7 712 aa16.17■□□□□ 0.18
COL6A6-203ENST00000511332 ZNF219Q9P2Y4 722 aaPredicted RBP16.17■□□□□ 0.18
COL6A6-203ENST00000511332 GNAI3P08754 354 aa16.16■□□□□ 0.18
COL6A6-203ENST00000511332 FAM161AQ3B820 660 aa16.16■□□□□ 0.18
COL6A6-203ENST00000511332 ARHGAP27Q6ZUM4 889 aa16.16■□□□□ 0.18
COL6A6-203ENST00000511332 TMEM57Q8N5G2 664 aa16.16■□□□□ 0.18
COL6A6-203ENST00000511332 SUCLG2Q96I99 432 aa16.16■□□□□ 0.18
COL6A6-203ENST00000511332 GREM2Q9H772 168 aa16.16■□□□□ 0.18
COL6A6-203ENST00000511332 TNNQ9UQP3 1299 aa16.16■□□□□ 0.18
COL6A6-203ENST00000511332 CSF1RP07333 972 aa16.15■□□□□ 0.18
COL6A6-203ENST00000511332 FOXO4P98177 505 aa16.15■□□□□ 0.18
COL6A6-203ENST00000511332 ANKRD18AQ8IVF6 992 aa16.15■□□□□ 0.18
COL6A6-203ENST00000511332 ITPRIPQ8IWB1 547 aa16.15■□□□□ 0.18
COL6A6-203ENST00000511332 RTKN2Q8IZC4 609 aa16.15■□□□□ 0.18
COL6A6-203ENST00000511332 SNED1Q8TER0 1413 aa16.15■□□□□ 0.18
COL6A6-203ENST00000511332 C7orf43Q8WVR3 580 aa16.15■□□□□ 0.18
COL6A6-203ENST00000511332 CCDC85AQ96PX6 553 aaPredicted RBP16.15■□□□□ 0.18
COL6A6-203ENST00000511332 CHMP3Q9Y3E7 222 aa16.15■□□□□ 0.18
COL6A6-203ENST00000511332 ATP6V0A2Q9Y487 856 aa16.15■□□□□ 0.18
COL6A6-203ENST00000511332 LTBP3Q9NS15 1303 aa16.15■□□□□ 0.18
COL6A6-203ENST00000511332 UTRNP46939 3433 aa16.14■□□□□ 0.17
COL6A6-203ENST00000511332 ITGA6P23229 1130 aa16.14■□□□□ 0.17
COL6A6-203ENST00000511332 CELF1Q92879 486 aaKnown RBP16.14■□□□□ 0.17
COL6A6-203ENST00000511332 MEIS3Q99687 375 aa16.14■□□□□ 0.17
COL6A6-203ENST00000511332 TAOK3Q9H2K8 898 aa16.14■□□□□ 0.17
COL6A6-203ENST00000511332 BICC1Q9H694 974 aaKnown RBP16.14■□□□□ 0.17
COL6A6-203ENST00000511332 SEC31BQ9NQW1 1179 aa16.14■□□□□ 0.17
COL6A6-203ENST00000511332 DUOX1Q9NRD9 1551 aa16.13■□□□□ 0.17
COL6A6-203ENST00000511332 ANKRD18BA2A2Z9 1011 aa16.13■□□□□ 0.17
COL6A6-203ENST00000511332 RPS8P62241 208 aaKnown RBP16.13■□□□□ 0.17
COL6A6-203ENST00000511332 IFIT5Q13325 482 aaKnown RBP16.13■□□□□ 0.17
COL6A6-203ENST00000511332 RABL6Q3YEC7 729 aaPredicted RBP16.13■□□□□ 0.17
COL6A6-203ENST00000511332 EPHA10Q5JZY3 1008 aa16.13■□□□□ 0.17
COL6A6-203ENST00000511332 LMBR1LQ6UX01 489 aa16.13■□□□□ 0.17
COL6A6-203ENST00000511332 SP8Q8IXZ3 490 aa16.13■□□□□ 0.17
COL6A6-203ENST00000511332 NFKBIEO00221 500 aa16.12■□□□□ 0.17
COL6A6-203ENST00000511332 RLBP1P12271 317 aa16.12■□□□□ 0.17
COL6A6-203ENST00000511332 IGHMBP2P38935 993 aaKnown RBP16.12■□□□□ 0.17
COL6A6-203ENST00000511332 CCDC57Q2TAC2 916 aa16.12■□□□□ 0.17
COL6A6-203ENST00000511332 KAZALD1Q96I82 304 aa16.12■□□□□ 0.17
COL6A6-203ENST00000511332 PLIN1O60240 522 aa16.11■□□□□ 0.17
COL6A6-203ENST00000511332 FKBP4Q02790 459 aaKnown RBP eCLIP16.11■□□□□ 0.17
COL6A6-203ENST00000511332 RASSF7Q02833 373 aa16.11■□□□□ 0.17
COL6A6-203ENST00000511332 PDE3AQ14432 1141 aa16.11■□□□□ 0.17
COL6A6-203ENST00000511332 ANKRD44Q8N8A2 993 aa16.11■□□□□ 0.17
COL6A6-203ENST00000511332 PANK1Q8TE04 598 aa16.11■□□□□ 0.17
COL6A6-203ENST00000511332 PSMD1Q99460 953 aa16.11■□□□□ 0.17
COL6A6-203ENST00000511332 LMNB1P20700 586 aa16.1■□□□□ 0.17
COL6A6-203ENST00000511332 RRP1P56182 461 aaKnown RBP16.1■□□□□ 0.17
COL6A6-203ENST00000511332 MVPQ14764 893 aaKnown RBP16.1■□□□□ 0.17
COL6A6-203ENST00000511332 TAF7LQ5H9L4 462 aa16.1■□□□□ 0.17
COL6A6-203ENST00000511332 OLFM4Q6UX06 510 aa16.1■□□□□ 0.17
COL6A6-203ENST00000511332 MPHOSPH8Q99549 860 aa16.1■□□□□ 0.17
COL6A6-203ENST00000511332 BSDC1Q9NW68 430 aaPredicted RBP16.1■□□□□ 0.17
COL6A6-203ENST00000511332 LRRFIP2Q9Y608 721 aaKnown RBP16.1■□□□□ 0.17
COL6A6-203ENST00000511332 GNAI2P04899 355 aa16.09■□□□□ 0.17
COL6A6-203ENST00000511332 DPP8Q6V1X1 898 aaPredicted RBP16.09■□□□□ 0.17
COL6A6-203ENST00000511332 SUPT20HQ8NEM7 779 aa16.09■□□□□ 0.17
COL6A6-203ENST00000511332 CHMP4BQ9H444 224 aaKnown RBP16.09■□□□□ 0.17
COL6A6-203ENST00000511332 DDX19BQ9UMR2 479 aa16.09■□□□□ 0.17
COL6A6-203ENST00000511332 MPNDQ8N594 471 aa16.08■□□□□ 0.16
COL6A6-203ENST00000511332 RNF181Q9P0P0 153 aa16.08■□□□□ 0.16
COL6A6-203ENST00000511332 SLC51AQ86UW1 340 aa16.07■□□□□ 0.16
COL6A6-203ENST00000511332 ANKIB1Q9P2G1 1089 aa16.07■□□□□ 0.16
COL6A6-203ENST00000511332 XDHP47989 1333 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms