RNA–Protein interactions for RNA: ENST00000511298.1

CDS1-202, Transcript of CDP-diacylglycerol synthase 1, humanhuman

TSL 5

Gene CDS1, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDS1-202ENST00000511298 CELF1Q92879 486 aaKnown RBP27.81■■■□□ 2.04
CDS1-202ENST00000511298 FER1L6Q2WGJ9 1857 aa27.81■■■□□ 2.04
CDS1-202ENST00000511298 CASP7P55210 303 aa27.8■■■□□ 2.04
CDS1-202ENST00000511298 HNRNPUQ00839 825 aaKnown RBP eCLIP27.8■■■□□ 2.04
CDS1-202ENST00000511298 TMC4Q7Z404 712 aa27.8■■■□□ 2.04
CDS1-202ENST00000511298 GLTPD2A6NH11 291 aa27.79■■■□□ 2.04
CDS1-202ENST00000511298 KIF3CO14782 793 aa27.79■■■□□ 2.04
CDS1-202ENST00000511298 SBF1O95248 1867 aa27.78■■■□□ 2.04
CDS1-202ENST00000511298 RPS8P62241 208 aaKnown RBP27.78■■■□□ 2.04
CDS1-202ENST00000511298 CCDC152Q4G0S7 254 aa27.78■■■□□ 2.04
CDS1-202ENST00000511298 UBE3BQ7Z3V4 1068 aa27.78■■■□□ 2.04
CDS1-202ENST00000511298 TMX4Q9H1E5 349 aaPredicted RBP27.78■■■□□ 2.04
CDS1-202ENST00000511298 KDM2BQ8NHM5 1336 aa27.77■■■□□ 2.04
CDS1-202ENST00000511298 IARSP41252 1262 aaKnown RBP27.77■■■□□ 2.04
CDS1-202ENST00000511298 TTLL11Q8NHH1 800 aa27.77■■■□□ 2.04
CDS1-202ENST00000511298 PLA2G12BQ9BX93 195 aa27.77■■■□□ 2.04
CDS1-202ENST00000511298 RTFDC1Q9BY42 306 aaPredicted RBP27.77■■■□□ 2.04
CDS1-202ENST00000511298 NMRK2Q9NPI5 230 aa27.77■■■□□ 2.04
CDS1-202ENST00000511298 SEC31BQ9NQW1 1179 aa27.77■■■□□ 2.04
CDS1-202ENST00000511298 DDX60Q8IY21 1712 aaKnown RBP27.77■■■□□ 2.04
CDS1-202ENST00000511298 CTSWP56202 376 aa27.76■■■□□ 2.03
CDS1-202ENST00000511298 PTPRCP08575 1304 aa27.75■■■□□ 2.03
CDS1-202ENST00000511298 ALDH1L1O75891 902 aa27.75■■■□□ 2.03
CDS1-202ENST00000511298 BCL2L13Q9BXK5 485 aa27.75■■■□□ 2.03
CDS1-202ENST00000511298 DPY19L2Q6NUT2 758 aa27.74■■■□□ 2.03
CDS1-202ENST00000511298 MPNDQ8N594 471 aa27.74■■■□□ 2.03
CDS1-202ENST00000511298 VPS33BQ9H267 617 aa27.74■■■□□ 2.03
CDS1-202ENST00000511298 LAMB2P55268 1798 aa27.73■■■□□ 2.03
CDS1-202ENST00000511298 CACNA1FO60840 1977 aa27.73■■■□□ 2.03
CDS1-202ENST00000511298 BRPF1P55201 1214 aaPredicted RBP27.73■■■□□ 2.03
CDS1-202ENST00000511298 CCDC85AQ96PX6 553 aaPredicted RBP27.73■■■□□ 2.03
CDS1-202ENST00000511298 CACNA1SQ13698 1873 aa27.72■■■□□ 2.03
CDS1-202ENST00000511298 CSF1RP07333 972 aa27.72■■■□□ 2.03
CDS1-202ENST00000511298 C1QTNF8P60827 252 aa27.72■■■□□ 2.03
CDS1-202ENST00000511298 SLC4A10Q6U841 1118 aa27.72■■■□□ 2.03
CDS1-202ENST00000511298 DPP8Q6V1X1 898 aaPredicted RBP27.72■■■□□ 2.03
CDS1-202ENST00000511298 SRCIN1Q9C0H9 1055 aa27.72■■■□□ 2.03
CDS1-202ENST00000511298 RRAGCQ9HB90 399 aa27.72■■■□□ 2.03
CDS1-202ENST00000511298 SMC4Q9NTJ3 1288 aa27.72■■■□□ 2.03
CDS1-202ENST00000511298 FZD9O00144 591 aa27.71■■■□□ 2.03
CDS1-202ENST00000511298 SUPT20HQ8NEM7 779 aa27.71■■■□□ 2.03
CDS1-202ENST00000511298 RTL9Q8NET4 1388 aa27.71■■■□□ 2.03
CDS1-202ENST00000511298 RARSP54136 660 aaKnown RBP27.7■■■□□ 2.02
CDS1-202ENST00000511298 GREM2Q9H772 168 aa27.7■■■□□ 2.02
CDS1-202ENST00000511298 GRM8O00222 908 aa27.69■■■□□ 2.02
CDS1-202ENST00000511298 COL4A1P02462 1669 aa27.68■■■□□ 2.02
CDS1-202ENST00000511298 POTECB2RU33 542 aa27.68■■■□□ 2.02
CDS1-202ENST00000511298 LARGE2Q8N3Y3 721 aa27.68■■■□□ 2.02
CDS1-202ENST00000511298 JDP2Q8WYK2 163 aa27.68■■■□□ 2.02
CDS1-202ENST00000511298 DDNO94850 711 aaPredicted RBP27.67■■■□□ 2.02
CDS1-202ENST00000511298 GPSM2P81274 684 aa27.67■■■□□ 2.02
CDS1-202ENST00000511298 FOXO4P98177 505 aa27.67■■■□□ 2.02
CDS1-202ENST00000511298 ANKRD18AQ8IVF6 992 aa27.67■■■□□ 2.02
CDS1-202ENST00000511298 CDC5LQ99459 802 aaKnown RBP27.67■■■□□ 2.02
CDS1-202ENST00000511298 NSFL1CQ9UNZ2 370 aaKnown RBP27.67■■■□□ 2.02
CDS1-202ENST00000511298 ZBED9Q6R2W3 1325 aa27.67■■■□□ 2.02
CDS1-202ENST00000511298 PPIP5K2O43314 1243 aa27.66■■■□□ 2.02
CDS1-202ENST00000511298 C9orf78Q9NZ63 289 aaPredicted RBP27.66■■■□□ 2.02
CDS1-202ENST00000511298 NOB1Q9ULX3 412 aaKnown RBP27.66■■■□□ 2.02
CDS1-202ENST00000511298 ZNF541Q9H0D2 1346 aa27.66■■■□□ 2.02
CDS1-202ENST00000511298 VEGFAP15692 232 aaPredicted RBP27.65■■■□□ 2.02
CDS1-202ENST00000511298 KIAA2012Q0VF49 1180 aa27.65■■■□□ 2.02
CDS1-202ENST00000511298 AOC3Q16853 763 aa27.65■■■□□ 2.02
CDS1-202ENST00000511298 PODXL2Q9NZ53 605 aa27.65■■■□□ 2.02
CDS1-202ENST00000511298 UTYO14607 1347 aa27.65■■■□□ 2.02
CDS1-202ENST00000511298 TOMM70O94826 608 aa27.64■■■□□ 2.02
CDS1-202ENST00000511298 BSDC1Q9NW68 430 aaPredicted RBP27.64■■■□□ 2.02
CDS1-202ENST00000511298 POLLQ9UGP5 575 aa27.64■■■□□ 2.02
CDS1-202ENST00000511298 COL4A5P29400 1685 aa27.64■■■□□ 2.02
CDS1-202ENST00000511298 EPHA10Q5JZY3 1008 aa27.63■■■□□ 2.01
CDS1-202ENST00000511298 L3MBTL3Q96JM7 780 aaPredicted RBP27.63■■■□□ 2.01
CDS1-202ENST00000511298 ITGA6P23229 1130 aa27.62■■■□□ 2.01
CDS1-202ENST00000511298 FAM161AQ3B820 660 aa27.62■■■□□ 2.01
CDS1-202ENST00000511298 NIM1KQ8IY84 436 aa27.62■■■□□ 2.01
CDS1-202ENST00000511298 TBC1D16Q8TBP0 767 aa27.62■■■□□ 2.01
CDS1-202ENST00000511298 TIAM2Q8IVF5 1701 aa27.61■■■□□ 2.01
CDS1-202ENST00000511298 NBPF7P0C2Y1 421 aaPredicted RBP27.61■■■□□ 2.01
CDS1-202ENST00000511298 KAZALD1Q96I82 304 aa27.61■■■□□ 2.01
CDS1-202ENST00000511298 CCDC88AQ3V6T2 1871 aa27.61■■■□□ 2.01
CDS1-202ENST00000511298 DICER1Q9UPY3 1922 aaKnown RBP27.61■■■□□ 2.01
CDS1-202ENST00000511298 TAF1P21675 1872 aa27.6■■■□□ 2.01
CDS1-202ENST00000511298 EIF6P56537 245 aaKnown RBP27.6■■■□□ 2.01
CDS1-202ENST00000511298 WASHC4Q2M389 1173 aa27.6■■■□□ 2.01
CDS1-202ENST00000511298 ARHGAP45Q92619 1136 aa27.6■■■□□ 2.01
CDS1-202ENST00000511298 API5Q9BZZ5 524 aaKnown RBP27.6■■■□□ 2.01
CDS1-202ENST00000511298 ZNRF3Q9ULT6 936 aa27.6■■■□□ 2.01
CDS1-202ENST00000511298 MINPP1Q9UNW1 487 aa27.6■■■□□ 2.01
CDS1-202ENST00000511298 LRRC37AA6NMS7 1700 aa27.59■■■□□ 2.01
CDS1-202ENST00000511298 C6orf229H3BNL8 230 aa27.59■■■□□ 2.01
CDS1-202ENST00000511298 LMBR1LQ6UX01 489 aa27.59■■■□□ 2.01
CDS1-202ENST00000511298 GPC2Q8N158 579 aa27.59■■■□□ 2.01
CDS1-202ENST00000511298 RBM46Q8TBY0 533 aaKnown RBP27.59■■■□□ 2.01
CDS1-202ENST00000511298 SUCLG2Q96I99 432 aa27.59■■■□□ 2.01
CDS1-202ENST00000511298 USP44Q9H0E7 712 aa27.59■■■□□ 2.01
CDS1-202ENST00000511298 DUOX1Q9NRD9 1551 aa27.59■■■□□ 2.01
CDS1-202ENST00000511298 IGHMBP2P38935 993 aaKnown RBP27.58■■■□□ 2.01
CDS1-202ENST00000511298 ANKIB1Q9P2G1 1089 aa27.58■■■□□ 2.01
CDS1-202ENST00000511298 ANKRD18BA2A2Z9 1011 aa27.57■■■□□ 2
CDS1-202ENST00000511298 C16orf71Q8IYS4 520 aaPredicted RBP27.57■■■□□ 2
CDS1-202ENST00000511298 EYA3Q99504 573 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms