RNA–Protein interactions for RNA: ENST00000511162.1

SERF1A-206, Transcript of small EDRK-rich factor 1A, humanhuman

TSL 4

Gene SERF1A, Length 328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-206ENST00000511162 GRAPLQ8TC17 118 aaPredicted RBP27.63■■■□□ 2.01
SERF1A-206ENST00000511162 API5Q9BZZ5 524 aaKnown RBP27.63■■■□□ 2.01
SERF1A-206ENST00000511162 GRM8O00222 908 aa27.61■■■□□ 2.01
SERF1A-206ENST00000511162 CCDC152Q4G0S7 254 aa27.61■■■□□ 2.01
SERF1A-206ENST00000511162 SLC51AQ86UW1 340 aa27.61■■■□□ 2.01
SERF1A-206ENST00000511162 PLA2G12BQ9BX93 195 aa27.61■■■□□ 2.01
SERF1A-206ENST00000511162 ARHGAP45Q92619 1136 aa27.6■■■□□ 2.01
SERF1A-206ENST00000511162 SNED1Q8TER0 1413 aa27.59■■■□□ 2.01
SERF1A-206ENST00000511162 BBOX1O75936 387 aa27.59■■■□□ 2.01
SERF1A-206ENST00000511162 YTHDC1Q96MU7 727 aaKnown RBP27.59■■■□□ 2.01
SERF1A-206ENST00000511162 CCDC85AQ96PX6 553 aaPredicted RBP27.59■■■□□ 2.01
SERF1A-206ENST00000511162 GPBP1L1Q9HC44 474 aaPredicted RBP27.59■■■□□ 2.01
SERF1A-206ENST00000511162 C9orf78Q9NZ63 289 aaPredicted RBP27.59■■■□□ 2.01
SERF1A-206ENST00000511162 LTBP3Q9NS15 1303 aa27.59■■■□□ 2.01
SERF1A-206ENST00000511162 COL4A1P02462 1669 aa27.59■■■□□ 2.01
SERF1A-206ENST00000511162 CC2D2BQ6DHV5 1058 aa27.58■■■□□ 2.01
SERF1A-206ENST00000511162 TTLL11Q8NHH1 800 aa27.58■■■□□ 2.01
SERF1A-206ENST00000511162 FRAT1Q92837 279 aaPredicted RBP27.58■■■□□ 2.01
SERF1A-206ENST00000511162 CELF1Q92879 486 aaKnown RBP27.58■■■□□ 2.01
SERF1A-206ENST00000511162 TAOK3Q9H2K8 898 aa27.58■■■□□ 2.01
SERF1A-206ENST00000511162 SEC31BQ9NQW1 1179 aa27.58■■■□□ 2.01
SERF1A-206ENST00000511162 ATP6V0A2Q9Y487 856 aa27.58■■■□□ 2.01
SERF1A-206ENST00000511162 IPO8O15397 1037 aaKnown RBP27.57■■■□□ 2
SERF1A-206ENST00000511162 PRELPP51888 382 aa27.57■■■□□ 2
SERF1A-206ENST00000511162 C9orf131Q5VYM1 1079 aa27.57■■■□□ 2
SERF1A-206ENST00000511162 RTKN2Q8IZC4 609 aa27.57■■■□□ 2
SERF1A-206ENST00000511162 SBF1O95248 1867 aa27.57■■■□□ 2
SERF1A-206ENST00000511162 CCT4P50991 539 aaKnown RBP27.56■■■□□ 2
SERF1A-206ENST00000511162 RNF181Q9P0P0 153 aa27.56■■■□□ 2
SERF1A-206ENST00000511162 RTL9Q8NET4 1388 aa27.56■■■□□ 2
SERF1A-206ENST00000511162 FER1L6Q2WGJ9 1857 aa27.55■■■□□ 2
SERF1A-206ENST00000511162 TRIM27P14373 513 aa27.55■■■□□ 2
SERF1A-206ENST00000511162 LMNB1P20700 586 aa27.55■■■□□ 2
SERF1A-206ENST00000511162 TMC4Q7Z404 712 aa27.55■■■□□ 2
SERF1A-206ENST00000511162 ZNF526Q8TF50 670 aaPredicted RBP27.55■■■□□ 2
SERF1A-206ENST00000511162 GREM2Q9H772 168 aa27.55■■■□□ 2
SERF1A-206ENST00000511162 UTYO14607 1347 aa27.55■■■□□ 2
SERF1A-206ENST00000511162 NBPF7P0C2Y1 421 aaPredicted RBP27.54■■■□□ 2
SERF1A-206ENST00000511162 FKBP4Q02790 459 aaKnown RBP eCLIP27.54■■■□□ 2
SERF1A-206ENST00000511162 ATF7IPQ6VMQ6 1270 aa27.54■■■□□ 2
SERF1A-206ENST00000511162 SP8Q8IXZ3 490 aa27.54■■■□□ 2
SERF1A-206ENST00000511162 RPS8P62241 208 aaKnown RBP27.53■■■□□ 2
SERF1A-206ENST00000511162 FOXO4P98177 505 aa27.53■■■□□ 2
SERF1A-206ENST00000511162 TMX4Q9H1E5 349 aaPredicted RBP27.53■■■□□ 2
SERF1A-206ENST00000511162 CSF1RP07333 972 aa27.52■■■□□ 2
SERF1A-206ENST00000511162 FAM161AQ3B820 660 aa27.52■■■□□ 2
SERF1A-206ENST00000511162 GRIPAP1Q4V328 841 aa27.52■■■□□ 2
SERF1A-206ENST00000511162 EPHA10Q5JZY3 1008 aa27.52■■■□□ 2
SERF1A-206ENST00000511162 ZKSCAN2Q63HK3 967 aa27.52■■■□□ 2
SERF1A-206ENST00000511162 USP44Q9H0E7 712 aa27.52■■■□□ 2
SERF1A-206ENST00000511162 TNNQ9UQP3 1299 aa27.52■■■□□ 2
SERF1A-206ENST00000511162 SUCLG2Q96I99 432 aa27.51■■□□□ 1.99
SERF1A-206ENST00000511162 PSMD1Q99460 953 aa27.51■■□□□ 1.99
SERF1A-206ENST00000511162 TAF1P21675 1872 aa27.51■■□□□ 1.99
SERF1A-206ENST00000511162 CDC5LQ99459 802 aaKnown RBP27.5■■□□□ 1.99
SERF1A-206ENST00000511162 LRRC37AA6NMS7 1700 aa27.5■■□□□ 1.99
SERF1A-206ENST00000511162 MYH3P11055 1940 aa27.49■■□□□ 1.99
SERF1A-206ENST00000511162 INTS3Q68E01 1043 aaKnown RBP27.49■■□□□ 1.99
SERF1A-206ENST00000511162 ANKRD18AQ8IVF6 992 aa27.49■■□□□ 1.99
SERF1A-206ENST00000511162 KAZALD1Q96I82 304 aa27.49■■□□□ 1.99
SERF1A-206ENST00000511162 ZNF277Q9NRM2 450 aaPredicted RBP27.49■■□□□ 1.99
SERF1A-206ENST00000511162 ITGA6P23229 1130 aa27.48■■□□□ 1.99
SERF1A-206ENST00000511162 LMBR1LQ6UX01 489 aa27.48■■□□□ 1.99
SERF1A-206ENST00000511162 CLUAP1Q96AJ1 413 aa27.48■■□□□ 1.99
SERF1A-206ENST00000511162 KIF3CO14782 793 aa27.47■■□□□ 1.99
SERF1A-206ENST00000511162 RCAN3Q9UKA8 241 aa27.47■■□□□ 1.99
SERF1A-206ENST00000511162 DPP8Q6V1X1 898 aaPredicted RBP27.46■■□□□ 1.99
SERF1A-206ENST00000511162 MPNDQ8N594 471 aa27.46■■□□□ 1.99
SERF1A-206ENST00000511162 CHMP3Q9Y3E7 222 aa27.46■■□□□ 1.99
SERF1A-206ENST00000511162 ZC3H4Q9UPT8 1303 aaKnown RBP27.45■■□□□ 1.99
SERF1A-206ENST00000511162 RTFDC1Q9BY42 306 aaPredicted RBP27.45■■□□□ 1.98
SERF1A-206ENST00000511162 BICC1Q9H694 974 aaKnown RBP27.45■■□□□ 1.98
SERF1A-206ENST00000511162 DUOX1Q9NRD9 1551 aa27.44■■□□□ 1.98
SERF1A-206ENST00000511162 IARSP41252 1262 aaKnown RBP27.44■■□□□ 1.98
SERF1A-206ENST00000511162 CCDC88AQ3V6T2 1871 aa27.43■■□□□ 1.98
SERF1A-206ENST00000511162 ANKRD18BA2A2Z9 1011 aa27.43■■□□□ 1.98
SERF1A-206ENST00000511162 UBTFL1P0CB47 393 aaPredicted RBP27.43■■□□□ 1.98
SERF1A-206ENST00000511162 GPSM2P81274 684 aa27.43■■□□□ 1.98
SERF1A-206ENST00000511162 IFIT5Q13325 482 aaKnown RBP27.43■■□□□ 1.98
SERF1A-206ENST00000511162 RABL6Q3YEC7 729 aaPredicted RBP27.43■■□□□ 1.98
SERF1A-206ENST00000511162 ANKRD44Q8N8A2 993 aa27.43■■□□□ 1.98
SERF1A-206ENST00000511162 BSDC1Q9NW68 430 aaPredicted RBP27.43■■□□□ 1.98
SERF1A-206ENST00000511162 TIAM2Q8IVF5 1701 aa27.42■■□□□ 1.98
SERF1A-206ENST00000511162 IGHMBP2P38935 993 aaKnown RBP27.42■■□□□ 1.98
SERF1A-206ENST00000511162 SUPT20HQ8NEM7 779 aa27.42■■□□□ 1.98
SERF1A-206ENST00000511162 MEIS3Q99687 375 aa27.42■■□□□ 1.98
SERF1A-206ENST00000511162 NSFL1CQ9UNZ2 370 aaKnown RBP27.42■■□□□ 1.98
SERF1A-206ENST00000511162 FTSJ3Q8IY81 847 aaKnown RBP27.41■■□□□ 1.98
SERF1A-206ENST00000511162 TMEM57Q8N5G2 664 aa27.41■■□□□ 1.98
SERF1A-206ENST00000511162 CCDC57Q2TAC2 916 aa27.4■■□□□ 1.98
SERF1A-206ENST00000511162 DZIP1LQ8IYY4 767 aaKnown RBP27.4■■□□□ 1.98
SERF1A-206ENST00000511162 LTBP1Q14766 1721 aa27.4■■□□□ 1.98
SERF1A-206ENST00000511162 RLBP1P12271 317 aa27.39■■□□□ 1.98
SERF1A-206ENST00000511162 MPHOSPH8Q99549 860 aa27.39■■□□□ 1.98
SERF1A-206ENST00000511162 PODXL2Q9NZ53 605 aa27.39■■□□□ 1.98
SERF1A-206ENST00000511162 COL4A5P29400 1685 aa27.39■■□□□ 1.97
SERF1A-206ENST00000511162 PPIP5K2O43314 1243 aa27.38■■□□□ 1.97
SERF1A-206ENST00000511162 AOC3Q16853 763 aa27.38■■□□□ 1.97
SERF1A-206ENST00000511162 LARGE2Q8N3Y3 721 aa27.38■■□□□ 1.97
SERF1A-206ENST00000511162 ANKIB1Q9P2G1 1089 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms