RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 SSH3Q8TE77 659 aa9.98□□□□□ -0.81
SMAD1-209ENST00000511125 PDE8AO60658 829 aa9.97□□□□□ -0.81
SMAD1-209ENST00000511125 TIMM10P62072 90 aa9.97□□□□□ -0.81
SMAD1-209ENST00000511125 TFCP2Q12800 502 aa9.97□□□□□ -0.81
SMAD1-209ENST00000511125 TRIM28Q13263 835 aaKnown RBP9.97□□□□□ -0.81
SMAD1-209ENST00000511125 PARP10Q53GL7 1025 aa9.97□□□□□ -0.81
SMAD1-209ENST00000511125 PRR5LQ6MZQ0 368 aa9.97□□□□□ -0.81
SMAD1-209ENST00000511125 PTPN12Q05209 780 aaKnown RBP9.97□□□□□ -0.81
SMAD1-209ENST00000511125 OLFM4Q6UX06 510 aa9.97□□□□□ -0.81
SMAD1-209ENST00000511125 NLRP3Q96P20 1036 aa9.97□□□□□ -0.81
SMAD1-209ENST00000511125 PARP3Q9Y6F1 533 aa9.97□□□□□ -0.81
SMAD1-209ENST00000511125 AFDNP55196 1824 aaKnown RBP9.97□□□□□ -0.81
SMAD1-209ENST00000511125 SMC5Q8IY18 1101 aa9.97□□□□□ -0.81
SMAD1-209ENST00000511125 RHPN1Q8TCX5 695 aa9.97□□□□□ -0.81
SMAD1-209ENST00000511125 CELF1Q92879 486 aaKnown RBP9.97□□□□□ -0.81
SMAD1-209ENST00000511125 LRRCC1Q9C099 1032 aa9.97□□□□□ -0.81
SMAD1-209ENST00000511125 NUP98P52948 1817 aa9.97□□□□□ -0.81
SMAD1-209ENST00000511125 ZNF622Q969S3 477 aaKnown RBP eCLIP9.96□□□□□ -0.81
SMAD1-209ENST00000511125 TLR7Q9NYK1 1049 aaKnown RBP9.96□□□□□ -0.81
SMAD1-209ENST00000511125 CARMIL3Q8ND23 1372 aa9.96□□□□□ -0.82
SMAD1-209ENST00000511125 LY75O60449 1722 aa9.96□□□□□ -0.82
SMAD1-209ENST00000511125 ANKRD18BA2A2Z9 1011 aa9.96□□□□□ -0.82
SMAD1-209ENST00000511125 SASH1O94885 1247 aa9.96□□□□□ -0.82
SMAD1-209ENST00000511125 ADRA2BP18089 450 aa9.96□□□□□ -0.82
SMAD1-209ENST00000511125 AACSQ86V21 672 aa9.96□□□□□ -0.82
SMAD1-209ENST00000511125 NLGN1Q8N2Q7 840 aa9.96□□□□□ -0.82
SMAD1-209ENST00000511125 MPHOSPH8Q99549 860 aa9.96□□□□□ -0.82
SMAD1-209ENST00000511125 UTYO14607 1347 aa9.96□□□□□ -0.82
SMAD1-209ENST00000511125 POLRMTO00411 1230 aaKnown RBP9.95□□□□□ -0.82
SMAD1-209ENST00000511125 CHRNA5P30532 468 aa9.95□□□□□ -0.82
SMAD1-209ENST00000511125 NUCB1Q02818 461 aa9.95□□□□□ -0.82
SMAD1-209ENST00000511125 GPR101Q96P66 508 aaPredicted RBP9.95□□□□□ -0.82
SMAD1-209ENST00000511125 TAF1LQ8IZX4 1826 aa9.95□□□□□ -0.82
SMAD1-209ENST00000511125 PXDNLA1KZ92 1463 aa9.95□□□□□ -0.82
SMAD1-209ENST00000511125 POLA2Q14181 598 aa9.95□□□□□ -0.82
SMAD1-209ENST00000511125 GCC1Q96CN9 775 aa9.95□□□□□ -0.82
SMAD1-209ENST00000511125 IQSEC3Q9UPP2 1182 aaPredicted RBP9.95□□□□□ -0.82
SMAD1-209ENST00000511125 COL5A3P25940 1745 aaPredicted RBP9.95□□□□□ -0.82
SMAD1-209ENST00000511125 TM4SF1P30408 202 aa9.95□□□□□ -0.82
SMAD1-209ENST00000511125 RFX5P48382 616 aaPredicted RBP9.95□□□□□ -0.82
SMAD1-209ENST00000511125 METTL24Q5JXM2 366 aa9.95□□□□□ -0.82
SMAD1-209ENST00000511125 HDAC5Q9UQL6 1122 aa9.95□□□□□ -0.82
SMAD1-209ENST00000511125 AAMPQ13685 434 aa9.94□□□□□ -0.82
SMAD1-209ENST00000511125 CCDC152Q4G0S7 254 aa9.94□□□□□ -0.82
SMAD1-209ENST00000511125 NYXQ9GZU5 481 aa9.94□□□□□ -0.82
SMAD1-209ENST00000511125 ST5P78524 1137 aa9.94□□□□□ -0.82
SMAD1-209ENST00000511125 RPGRQ92834 1020 aaKnown RBP9.94□□□□□ -0.82
SMAD1-209ENST00000511125 EAF2Q96CJ1 260 aaPredicted RBP9.94□□□□□ -0.82
SMAD1-209ENST00000511125 IFIT2P09913 472 aaKnown RBP9.94□□□□□ -0.82
SMAD1-209ENST00000511125 RABL6Q3YEC7 729 aaPredicted RBP9.94□□□□□ -0.82
SMAD1-209ENST00000511125 JAG2Q9Y219 1238 aa9.94□□□□□ -0.82
SMAD1-209ENST00000511125 TNS1Q9HBL0 1735 aaKnown RBP9.93□□□□□ -0.82
SMAD1-209ENST00000511125 RILPL2Q969X0 211 aa9.93□□□□□ -0.82
SMAD1-209ENST00000511125 SNRKQ9NRH2 765 aa9.93□□□□□ -0.82
SMAD1-209ENST00000511125 TRIM6-TRIM34B2RNG4 842 aa9.93□□□□□ -0.82
SMAD1-209ENST00000511125 CSF1RP07333 972 aa9.93□□□□□ -0.82
SMAD1-209ENST00000511125 DDX46Q7L014 1031 aaKnown RBP9.93□□□□□ -0.82
SMAD1-209ENST00000511125 CLASRPQ8N2M8 674 aaKnown RBP9.93□□□□□ -0.82
SMAD1-209ENST00000511125 FLAD1Q8NFF5 587 aa9.93□□□□□ -0.82
SMAD1-209ENST00000511125 EDC3Q96F86 508 aaKnown RBP9.93□□□□□ -0.82
SMAD1-209ENST00000511125 TAF1P21675 1872 aa9.92□□□□□ -0.82
SMAD1-209ENST00000511125 NUP188Q5SRE5 1749 aa9.92□□□□□ -0.82
SMAD1-209ENST00000511125 A0A0G2JLW4 131 aa9.92□□□□□ -0.82
SMAD1-209ENST00000511125 EYA2O00167 538 aa9.92□□□□□ -0.82
SMAD1-209ENST00000511125 ADORA1P30542 326 aa9.92□□□□□ -0.82
SMAD1-209ENST00000511125 IGHMBP2P38935 993 aaKnown RBP9.92□□□□□ -0.82
SMAD1-209ENST00000511125 GORABQ5T7V8 394 aa9.92□□□□□ -0.82
SMAD1-209ENST00000511125 ATG9AQ7Z3C6 839 aa9.92□□□□□ -0.82
SMAD1-209ENST00000511125 CCDC125Q86Z20 511 aa9.92□□□□□ -0.82
SMAD1-209ENST00000511125 KIF1BPQ96EK5 621 aa9.92□□□□□ -0.82
SMAD1-209ENST00000511125 BOLA2Q9H3K6 86 aa9.92□□□□□ -0.82
SMAD1-209ENST00000511125 CEP126Q9P2H0 1117 aa9.92□□□□□ -0.82
SMAD1-209ENST00000511125 ANKRD18AQ8IVF6 992 aa9.92□□□□□ -0.82
SMAD1-209ENST00000511125 DBNDD2Q9BQY9 259 aa9.92□□□□□ -0.82
SMAD1-209ENST00000511125 MTX1Q13505 466 aa9.92□□□□□ -0.82
SMAD1-209ENST00000511125 PLEKHM2Q8IWE5 1019 aa9.92□□□□□ -0.82
SMAD1-209ENST00000511125 IBTKQ9P2D0 1353 aaPredicted RBP9.91□□□□□ -0.82
SMAD1-209ENST00000511125 CDHR2Q9BYE9 1310 aa9.91□□□□□ -0.82
SMAD1-209ENST00000511125 COPRSQ9NQ92 184 aa9.91□□□□□ -0.82
SMAD1-209ENST00000511125 ANKIB1Q9P2G1 1089 aa9.91□□□□□ -0.82
SMAD1-209ENST00000511125 UBR3Q6ZT12 1888 aa9.91□□□□□ -0.82
SMAD1-209ENST00000511125 RPS8P62241 208 aaKnown RBP9.91□□□□□ -0.82
SMAD1-209ENST00000511125 DNAJC2Q99543 621 aaKnown RBP9.91□□□□□ -0.82
SMAD1-209ENST00000511125 NSFL1CQ9UNZ2 370 aaKnown RBP9.91□□□□□ -0.82
SMAD1-209ENST00000511125 PI16Q6UXB8 463 aa9.9□□□□□ -0.82
SMAD1-209ENST00000511125 C2CD5Q86YS7 1000 aa9.9□□□□□ -0.82
SMAD1-209ENST00000511125 CHGBP05060 677 aa9.9□□□□□ -0.82
SMAD1-209ENST00000511125 CHRNDQ07001 517 aa9.9□□□□□ -0.82
SMAD1-209ENST00000511125 A0A1B0GUL7 405 aa9.9□□□□□ -0.83
SMAD1-209ENST00000511125 MX1P20591 662 aa9.9□□□□□ -0.83
SMAD1-209ENST00000511125 KLRK1P26718 216 aa9.9□□□□□ -0.83
SMAD1-209ENST00000511125 KCNJ4P48050 445 aa9.9□□□□□ -0.83
SMAD1-209ENST00000511125 C4AP0C0L4 1744 aa9.89□□□□□ -0.83
SMAD1-209ENST00000511125 PDE1AP54750 535 aa9.89□□□□□ -0.83
SMAD1-209ENST00000511125 SLFNL1Q499Z3 407 aa9.89□□□□□ -0.83
SMAD1-209ENST00000511125 HSP90AB4PQ58FF6 505 aa9.89□□□□□ -0.83
SMAD1-209ENST00000511125 TNNI3KQ59H18 835 aa9.89□□□□□ -0.83
SMAD1-209ENST00000511125 PELP1Q8IZL8 1130 aaKnown RBP9.89□□□□□ -0.83
SMAD1-209ENST00000511125 PLA2G12BQ9BX93 195 aa9.89□□□□□ -0.83
SMAD1-209ENST00000511125 DBNLQ9UJU6 430 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms