RNA–Protein interactions for RNA: ENST00000509980.5

EXOSC9-208, Transcript of exosome component 9, human

TSL 2

Gene EXOSC9, Length 1,317 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EXOSC9-208	ENST00000509980	KIAA2012	Q0VF49	1180 aa		13.98	□□□□□ -0.17
EXOSC9-208	ENST00000509980	PKN2	Q16513	984 aa	Known RBP	13.98	□□□□□ -0.17
EXOSC9-208	ENST00000509980	SUSD4	Q5VX71	490 aa		13.98	□□□□□ -0.17
EXOSC9-208	ENST00000509980	C2orf69	Q8N8R5	385 aa		13.98	□□□□□ -0.17
EXOSC9-208	ENST00000509980	TIMELESS	Q9UNS1	1208 aa		13.98	□□□□□ -0.17
EXOSC9-208	ENST00000509980	ANKRD36C	Q5JPF3	1778 aa		13.98	□□□□□ -0.17
EXOSC9-208	ENST00000509980	MAP3K15	Q6ZN16	1313 aa		13.97	□□□□□ -0.17
EXOSC9-208	ENST00000509980	NTSR2	O95665	410 aa		13.97	□□□□□ -0.17
EXOSC9-208	ENST00000509980	MICALL2	Q8IY33	904 aa		13.97	□□□□□ -0.17
EXOSC9-208	ENST00000509980	DUOX1	Q9NRD9	1551 aa		13.97	□□□□□ -0.17
EXOSC9-208	ENST00000509980	YDJC	A8MPS7	323 aa		13.96	□□□□□ -0.17
EXOSC9-208	ENST00000509980		H7C1D1	291 aa		13.96	□□□□□ -0.17
EXOSC9-208	ENST00000509980	U2SURP	O15042	1029 aa	Known RBP	13.96	□□□□□ -0.17
EXOSC9-208	ENST00000509980	HSPA5	P11021	654 aa	Known RBP	13.96	□□□□□ -0.17
EXOSC9-208	ENST00000509980	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
EXOSC9-208	ENST00000509980	KRT26	Q7Z3Y9	468 aa		13.96	□□□□□ -0.17
EXOSC9-208	ENST00000509980	TMX4	Q9H1E5	349 aa	Predicted RBP	13.96	□□□□□ -0.17
EXOSC9-208	ENST00000509980	LRRC37A	A6NMS7	1700 aa		13.95	□□□□□ -0.18
EXOSC9-208	ENST00000509980	ABCC4	O15439	1325 aa		13.95	□□□□□ -0.18
EXOSC9-208	ENST00000509980	ADM5	C9JUS6	153 aa		13.95	□□□□□ -0.18
EXOSC9-208	ENST00000509980	EGFR	P00533	1210 aa		13.95	□□□□□ -0.18
EXOSC9-208	ENST00000509980	GPT	P24298	496 aa		13.95	□□□□□ -0.18
EXOSC9-208	ENST00000509980	DPP8	Q6V1X1	898 aa	Predicted RBP	13.95	□□□□□ -0.18
EXOSC9-208	ENST00000509980	SAMD7	Q7Z3H4	446 aa		13.95	□□□□□ -0.18
EXOSC9-208	ENST00000509980	REM2	Q8IYK8	340 aa	Predicted RBP	13.95	□□□□□ -0.18
EXOSC9-208	ENST00000509980	ZNF34	Q8IZ26	560 aa		13.95	□□□□□ -0.18
EXOSC9-208	ENST00000509980	DPF2	Q92785	391 aa		13.95	□□□□□ -0.18
EXOSC9-208	ENST00000509980	TAF1	P21675	1872 aa		13.94	□□□□□ -0.18
EXOSC9-208	ENST00000509980	TTLL7	Q6ZT98	887 aa		13.94	□□□□□ -0.18
EXOSC9-208	ENST00000509980	MCM10	Q7L590	875 aa		13.94	□□□□□ -0.18
EXOSC9-208	ENST00000509980	SP8	Q8IXZ3	490 aa		13.94	□□□□□ -0.18
EXOSC9-208	ENST00000509980	MPND	Q8N594	471 aa		13.94	□□□□□ -0.18
EXOSC9-208	ENST00000509980	NLRP3	Q96P20	1036 aa		13.94	□□□□□ -0.18
EXOSC9-208	ENST00000509980	KDM3B	Q7LBC6	1761 aa		13.93	□□□□□ -0.18
EXOSC9-208	ENST00000509980	SLC10A5	Q5PT55	438 aa		13.93	□□□□□ -0.18
EXOSC9-208	ENST00000509980	NGEF	Q8N5V2	710 aa		13.93	□□□□□ -0.18
EXOSC9-208	ENST00000509980	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.93	□□□□□ -0.18
EXOSC9-208	ENST00000509980	PER1	O15534	1290 aa	Predicted RBP	13.92	□□□□□ -0.18
EXOSC9-208	ENST00000509980	BBOX1	O75936	387 aa		13.92	□□□□□ -0.18
EXOSC9-208	ENST00000509980	PRKAR2B	P31323	418 aa		13.92	□□□□□ -0.18
EXOSC9-208	ENST00000509980	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.92	□□□□□ -0.18
EXOSC9-208	ENST00000509980	KIF6	Q6ZMV9	814 aa		13.92	□□□□□ -0.18
EXOSC9-208	ENST00000509980	RASAL3	Q86YV0	1011 aa		13.92	□□□□□ -0.18
EXOSC9-208	ENST00000509980	ZNF296	Q8WUU4	475 aa	Predicted RBP	13.92	□□□□□ -0.18
EXOSC9-208	ENST00000509980	DCPS	Q96C86	337 aa	Known RBP	13.92	□□□□□ -0.18
EXOSC9-208	ENST00000509980	RSPH6A	Q9H0K4	717 aa		13.92	□□□□□ -0.18
EXOSC9-208	ENST00000509980	ZBTB3	Q9H5J0	574 aa		13.92	□□□□□ -0.18
EXOSC9-208	ENST00000509980	DDX60	Q8IY21	1712 aa	Known RBP	13.92	□□□□□ -0.18
EXOSC9-208	ENST00000509980	PPP1R42	Q7Z4L9	355 aa		13.91	□□□□□ -0.18
EXOSC9-208	ENST00000509980	HDAC9	Q9UKV0	1011 aa		13.91	□□□□□ -0.18
EXOSC9-208	ENST00000509980	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.91	□□□□□ -0.18
EXOSC9-208	ENST00000509980	PAPPA2	Q9BXP8	1791 aa		13.91	□□□□□ -0.18
EXOSC9-208	ENST00000509980	PSMD14	O00487	310 aa		13.9	□□□□□ -0.18
EXOSC9-208	ENST00000509980	FXR1	P51114	621 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
EXOSC9-208	ENST00000509980	NOM1	Q5C9Z4	860 aa	Known RBP	13.9	□□□□□ -0.18
EXOSC9-208	ENST00000509980	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.9	□□□□□ -0.18
EXOSC9-208	ENST00000509980	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.9	□□□□□ -0.18
EXOSC9-208	ENST00000509980	RTF1	Q92541	710 aa	Known RBP	13.9	□□□□□ -0.18
EXOSC9-208	ENST00000509980	MKI67	P46013	3256 aa	Known RBP	13.9	□□□□□ -0.18
EXOSC9-208	ENST00000509980	RPS12	P25398	132 aa	Known RBP	13.9	□□□□□ -0.19
EXOSC9-208	ENST00000509980	DCTN1	Q14203	1278 aa		13.9	□□□□□ -0.19
EXOSC9-208	ENST00000509980	PARP10	Q53GL7	1025 aa		13.9	□□□□□ -0.19
EXOSC9-208	ENST00000509980	CC2D1B	Q5T0F9	858 aa	Known RBP	13.9	□□□□□ -0.19
EXOSC9-208	ENST00000509980	CDCA5	Q96FF9	252 aa		13.9	□□□□□ -0.19
EXOSC9-208	ENST00000509980	SCN9A	Q15858	1988 aa		13.89	□□□□□ -0.19
EXOSC9-208	ENST00000509980	TBC1D8	O95759	1140 aa		13.89	□□□□□ -0.19
EXOSC9-208	ENST00000509980	TAF7	Q15545	349 aa	Predicted RBP	13.89	□□□□□ -0.19
EXOSC9-208	ENST00000509980	SULF1	Q8IWU6	871 aa		13.89	□□□□□ -0.19
EXOSC9-208	ENST00000509980	RRP7A	Q9Y3A4	280 aa	Known RBP	13.89	□□□□□ -0.19
EXOSC9-208	ENST00000509980	HTT	P42858	3142 aa		13.88	□□□□□ -0.19
EXOSC9-208	ENST00000509980	GPR25	O00155	361 aa		13.88	□□□□□ -0.19
EXOSC9-208	ENST00000509980	HTATSF1	O43719	755 aa	Known RBP	13.88	□□□□□ -0.19
EXOSC9-208	ENST00000509980	SLC4A2	P04920	1241 aa		13.88	□□□□□ -0.19
EXOSC9-208	ENST00000509980	MYL6B	P14649	208 aa		13.88	□□□□□ -0.19
EXOSC9-208	ENST00000509980	FKBP1B	P68106	108 aa		13.88	□□□□□ -0.19
EXOSC9-208	ENST00000509980	RBM26	Q5T8P6	1007 aa	Known RBP	13.88	□□□□□ -0.19
EXOSC9-208	ENST00000509980	UTP14A	Q9BVJ6	771 aa	Known RBP	13.88	□□□□□ -0.19
EXOSC9-208	ENST00000509980	MIS18A	Q9NYP9	233 aa		13.88	□□□□□ -0.19
EXOSC9-208	ENST00000509980	GGA3	Q9NZ52	723 aa		13.88	□□□□□ -0.19
EXOSC9-208	ENST00000509980	RTL9	Q8NET4	1388 aa		13.88	□□□□□ -0.19
EXOSC9-208	ENST00000509980	ASTN2	O75129	1339 aa	Predicted RBP	13.87	□□□□□ -0.19
EXOSC9-208	ENST00000509980	DLG5	Q8TDM6	1919 aa		13.87	□□□□□ -0.19
EXOSC9-208	ENST00000509980	GRAP	Q13588	217 aa		13.87	□□□□□ -0.19
EXOSC9-208	ENST00000509980	KIF4B	Q2VIQ3	1234 aa		13.87	□□□□□ -0.19
EXOSC9-208	ENST00000509980	GRAPL	Q8TC17	118 aa	Predicted RBP	13.87	□□□□□ -0.19
EXOSC9-208	ENST00000509980	TM4SF4	P48230	202 aa		13.86	□□□□□ -0.19
EXOSC9-208	ENST00000509980	WASHC4	Q2M389	1173 aa		13.86	□□□□□ -0.19
EXOSC9-208	ENST00000509980	TMC4	Q7Z404	712 aa		13.86	□□□□□ -0.19
EXOSC9-208	ENST00000509980	CFHR5	Q9BXR6	569 aa		13.86	□□□□□ -0.19
EXOSC9-208	ENST00000509980	DBNDD1	Q9H9R9	158 aa		13.86	□□□□□ -0.19
EXOSC9-208	ENST00000509980	KCNQ5	Q9NR82	932 aa		13.86	□□□□□ -0.19
EXOSC9-208	ENST00000509980	PSME4	Q14997	1843 aa		13.86	□□□□□ -0.19
EXOSC9-208	ENST00000509980	DDX46	Q7L014	1031 aa	Known RBP	13.85	□□□□□ -0.19
EXOSC9-208	ENST00000509980	LRP10	Q7Z4F1	713 aa		13.85	□□□□□ -0.19
EXOSC9-208	ENST00000509980	ERBB4	Q15303	1308 aa		13.84	□□□□□ -0.19
EXOSC9-208	ENST00000509980	POTEF	A5A3E0	1075 aa		13.84	□□□□□ -0.19
EXOSC9-208	ENST00000509980	HCLS1	P14317	486 aa	Predicted RBP	13.84	□□□□□ -0.19
EXOSC9-208	ENST00000509980	EIF4A1	P60842	406 aa	Known RBP	13.84	□□□□□ -0.19
EXOSC9-208	ENST00000509980		U3KPZ7	1027 aa	Predicted RBP	13.84	□□□□□ -0.19
EXOSC9-208	ENST00000509980	SZT2	Q5T011	3432 aa		13.83	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms