RNA–Protein interactions for RNA: ENST00000509869.5

SPOP-216, Transcript of speckle type BTB/POZ protein, human

TSL 5

Gene SPOP, Length 779 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPOP-216	ENST00000509869		F6X3S4	739 aa		11.96	□□□□□ -0.49
SPOP-216	ENST00000509869	SLFN5	Q08AF3	891 aa		11.96	□□□□□ -0.49
SPOP-216	ENST00000509869	SF3B3	Q15393	1217 aa	Known RBP	11.96	□□□□□ -0.49
SPOP-216	ENST00000509869	LAMB2	P55268	1798 aa		11.96	□□□□□ -0.49
SPOP-216	ENST00000509869	TIAM2	Q8IVF5	1701 aa		11.96	□□□□□ -0.49
SPOP-216	ENST00000509869	DDX60	Q8IY21	1712 aa	Known RBP	11.95	□□□□□ -0.5
SPOP-216	ENST00000509869	PDE8A	O60658	829 aa		11.95	□□□□□ -0.5
SPOP-216	ENST00000509869	CCDC152	Q4G0S7	254 aa		11.95	□□□□□ -0.5
SPOP-216	ENST00000509869	GRIPAP1	Q4V328	841 aa		11.95	□□□□□ -0.5
SPOP-216	ENST00000509869	DPP8	Q6V1X1	898 aa	Predicted RBP	11.95	□□□□□ -0.5
SPOP-216	ENST00000509869	UBE3B	Q7Z3V4	1068 aa		11.95	□□□□□ -0.5
SPOP-216	ENST00000509869	LARGE2	Q8N3Y3	721 aa		11.95	□□□□□ -0.5
SPOP-216	ENST00000509869	CELF1	Q92879	486 aa	Known RBP	11.95	□□□□□ -0.5
SPOP-216	ENST00000509869	PSMD1	Q99460	953 aa		11.95	□□□□□ -0.5
SPOP-216	ENST00000509869	TAF1	P21675	1872 aa		11.94	□□□□□ -0.5
SPOP-216	ENST00000509869	PPIP5K2	O43314	1243 aa		11.94	□□□□□ -0.5
SPOP-216	ENST00000509869	DDN	O94850	711 aa	Predicted RBP	11.94	□□□□□ -0.5
SPOP-216	ENST00000509869	SLC4A10	Q6U841	1118 aa		11.94	□□□□□ -0.5
SPOP-216	ENST00000509869	SP8	Q8IXZ3	490 aa		11.94	□□□□□ -0.5
SPOP-216	ENST00000509869	MPND	Q8N594	471 aa		11.94	□□□□□ -0.5
SPOP-216	ENST00000509869	LINS1	Q8NG48	757 aa		11.94	□□□□□ -0.5
SPOP-216	ENST00000509869	JDP2	Q8WYK2	163 aa		11.94	□□□□□ -0.5
SPOP-216	ENST00000509869	BCL2L13	Q9BXK5	485 aa		11.94	□□□□□ -0.5
SPOP-216	ENST00000509869	SEC31B	Q9NQW1	1179 aa		11.94	□□□□□ -0.5
SPOP-216	ENST00000509869	CACNA1F	O60840	1977 aa		11.93	□□□□□ -0.5
SPOP-216	ENST00000509869	VEGFA	P15692	232 aa	Predicted RBP	11.93	□□□□□ -0.5
SPOP-216	ENST00000509869	RPS8	P62241	208 aa	Known RBP	11.93	□□□□□ -0.5
SPOP-216	ENST00000509869	GCKR	Q14397	625 aa		11.93	□□□□□ -0.5
SPOP-216	ENST00000509869	TMC4	Q7Z404	712 aa		11.93	□□□□□ -0.5
SPOP-216	ENST00000509869	CEP350	Q5VT06	3117 aa		11.93	□□□□□ -0.5
SPOP-216	ENST00000509869	DICER1	Q9UPY3	1922 aa	Known RBP	11.93	□□□□□ -0.5
SPOP-216	ENST00000509869	SNED1	Q8TER0	1413 aa		11.93	□□□□□ -0.5
SPOP-216	ENST00000509869	CDHR2	Q9BYE9	1310 aa		11.92	□□□□□ -0.5
SPOP-216	ENST00000509869	ZNF541	Q9H0D2	1346 aa		11.92	□□□□□ -0.5
SPOP-216	ENST00000509869	TOMM70	O94826	608 aa		11.92	□□□□□ -0.5
SPOP-216	ENST00000509869	CTSW	P56202	376 aa		11.92	□□□□□ -0.5
SPOP-216	ENST00000509869	HNRNPU	Q00839	825 aa	Known RBP eCLIP	11.92	□□□□□ -0.5
SPOP-216	ENST00000509869	AOC3	Q16853	763 aa		11.92	□□□□□ -0.5
SPOP-216	ENST00000509869	NIM1K	Q8IY84	436 aa		11.92	□□□□□ -0.5
SPOP-216	ENST00000509869	SUPT20H	Q8NEM7	779 aa		11.92	□□□□□ -0.5
SPOP-216	ENST00000509869	SSH1	Q8WYL5	1049 aa		11.92	□□□□□ -0.5
SPOP-216	ENST00000509869	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.92	□□□□□ -0.5
SPOP-216	ENST00000509869	GJA3	Q9Y6H8	435 aa		11.92	□□□□□ -0.5
SPOP-216	ENST00000509869	C6orf229	H3BNL8	230 aa		11.91	□□□□□ -0.5
SPOP-216	ENST00000509869		H7C1W4	665 aa		11.91	□□□□□ -0.5
SPOP-216	ENST00000509869	EIF6	P56537	245 aa	Known RBP	11.91	□□□□□ -0.5
SPOP-216	ENST00000509869	BEND3	Q5T5X7	828 aa		11.91	□□□□□ -0.5
SPOP-216	ENST00000509869	ANKRD18A	Q8IVF6	992 aa		11.91	□□□□□ -0.5
SPOP-216	ENST00000509869	MRPL50	Q8N5N7	158 aa	Known RBP	11.91	□□□□□ -0.5
SPOP-216	ENST00000509869	SMC4	Q9NTJ3	1288 aa		11.91	□□□□□ -0.5
SPOP-216	ENST00000509869	FZD9	O00144	591 aa		11.9	□□□□□ -0.5
SPOP-216	ENST00000509869	GPSM2	P81274	684 aa		11.9	□□□□□ -0.5
SPOP-216	ENST00000509869	TTLL11	Q8NHH1	800 aa		11.9	□□□□□ -0.5
SPOP-216	ENST00000509869	GREM2	Q9H772	168 aa		11.9	□□□□□ -0.5
SPOP-216	ENST00000509869	C9orf78	Q9NZ63	289 aa	Predicted RBP	11.9	□□□□□ -0.5
SPOP-216	ENST00000509869	ANKIB1	Q9P2G1	1089 aa		11.9	□□□□□ -0.5
SPOP-216	ENST00000509869	CHMP3	Q9Y3E7	222 aa		11.9	□□□□□ -0.5
SPOP-216	ENST00000509869	RIMBP2	O15034	1052 aa		11.89	□□□□□ -0.51
SPOP-216	ENST00000509869	TRMT2A	Q8IZ69	625 aa	Known RBP	11.89	□□□□□ -0.51
SPOP-216	ENST00000509869	RBM46	Q8TBY0	533 aa	Known RBP	11.89	□□□□□ -0.51
SPOP-216	ENST00000509869	GPR101	Q96P66	508 aa	Predicted RBP	11.89	□□□□□ -0.51
SPOP-216	ENST00000509869	CDC5L	Q99459	802 aa	Known RBP	11.89	□□□□□ -0.51
SPOP-216	ENST00000509869	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.89	□□□□□ -0.51
SPOP-216	ENST00000509869	SRCIN1	Q9C0H9	1055 aa		11.89	□□□□□ -0.51
SPOP-216	ENST00000509869	COL4A1	P02462	1669 aa		11.89	□□□□□ -0.51
SPOP-216	ENST00000509869	COL4A5	P29400	1685 aa		11.88	□□□□□ -0.51
SPOP-216	ENST00000509869	POTEC	B2RU33	542 aa		11.88	□□□□□ -0.51
SPOP-216	ENST00000509869	GRM8	O00222	908 aa		11.88	□□□□□ -0.51
SPOP-216	ENST00000509869	CASP7	P55210	303 aa		11.88	□□□□□ -0.51
SPOP-216	ENST00000509869	KIAA2012	Q0VF49	1180 aa		11.88	□□□□□ -0.51
SPOP-216	ENST00000509869	WASHC4	Q2M389	1173 aa		11.88	□□□□□ -0.51
SPOP-216	ENST00000509869	FAM161A	Q3B820	660 aa		11.88	□□□□□ -0.51
SPOP-216	ENST00000509869	PTPRC	P08575	1304 aa		11.87	□□□□□ -0.51
SPOP-216	ENST00000509869	IQCA1L	A6NCM1	817 aa		11.87	□□□□□ -0.51
SPOP-216	ENST00000509869		G3V3G9	751 aa		11.87	□□□□□ -0.51
SPOP-216	ENST00000509869	ALDH1L1	O75891	902 aa		11.87	□□□□□ -0.51
SPOP-216	ENST00000509869	RAD17	O75943	681 aa		11.87	□□□□□ -0.51
SPOP-216	ENST00000509869	UFL1	O94874	794 aa		11.87	□□□□□ -0.51
SPOP-216	ENST00000509869	HSPA6	P17066	643 aa		11.87	□□□□□ -0.51
SPOP-216	ENST00000509869	ITGA6	P23229	1130 aa		11.87	□□□□□ -0.51
SPOP-216	ENST00000509869	IGHMBP2	P38935	993 aa	Known RBP	11.87	□□□□□ -0.51
SPOP-216	ENST00000509869	ALDH1L2	Q3SY69	923 aa		11.87	□□□□□ -0.51
SPOP-216	ENST00000509869	EAPP	Q56P03	285 aa	Predicted RBP	11.87	□□□□□ -0.51
SPOP-216	ENST00000509869	DCAF8	Q5TAQ9	597 aa		11.87	□□□□□ -0.51
SPOP-216	ENST00000509869	GPC2	Q8N158	579 aa		11.87	□□□□□ -0.51
SPOP-216	ENST00000509869	SMC1B	Q8NDV3	1235 aa		11.87	□□□□□ -0.51
SPOP-216	ENST00000509869	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.87	□□□□□ -0.51
SPOP-216	ENST00000509869	VPS33B	Q9H267	617 aa		11.87	□□□□□ -0.51
SPOP-216	ENST00000509869	POLL	Q9UGP5	575 aa		11.87	□□□□□ -0.51
SPOP-216	ENST00000509869	GGA1	Q9UJY5	639 aa		11.87	□□□□□ -0.51
SPOP-216	ENST00000509869	ZNRF3	Q9ULT6	936 aa		11.87	□□□□□ -0.51
SPOP-216	ENST00000509869	WDR90	Q96KV7	1748 aa		11.86	□□□□□ -0.51
SPOP-216	ENST00000509869	LMOD1	P29536	600 aa	Predicted RBP	11.86	□□□□□ -0.51
SPOP-216	ENST00000509869	FSTL1	Q12841	308 aa		11.86	□□□□□ -0.51
SPOP-216	ENST00000509869	DOK7	Q18PE1	504 aa		11.86	□□□□□ -0.51
SPOP-216	ENST00000509869	TBC1D16	Q8TBP0	767 aa		11.86	□□□□□ -0.51
SPOP-216	ENST00000509869	EYA3	Q99504	573 aa		11.86	□□□□□ -0.51
SPOP-216	ENST00000509869	PLA2G12B	Q9BX93	195 aa		11.86	□□□□□ -0.51
SPOP-216	ENST00000509869	ZC3H12C	Q9C0D7	883 aa	Known RBP	11.86	□□□□□ -0.51
SPOP-216	ENST00000509869	TAF1D	Q9H5J8	278 aa	Predicted RBP	11.86	□□□□□ -0.51

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