RNA–Protein interactions for RNA: ENST00000509854.5

SPOCK3-213, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 5

Gene SPOCK3, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-213ENST00000509854 SSH1Q8WYL5 1049 aa30.33■■■□□ 2.45
SPOCK3-213ENST00000509854 CELF1Q92879 486 aaKnown RBP30.33■■■□□ 2.45
SPOCK3-213ENST00000509854 NMRK2Q9NPI5 230 aa30.33■■■□□ 2.45
SPOCK3-213ENST00000509854 HNRNPUQ00839 825 aaKnown RBP eCLIP30.32■■■□□ 2.44
SPOCK3-213ENST00000509854 GLTPD2A6NH11 291 aa30.31■■■□□ 2.44
SPOCK3-213ENST00000509854 KIF3CO14782 793 aa30.31■■■□□ 2.44
SPOCK3-213ENST00000509854 IARSP41252 1262 aaKnown RBP30.31■■■□□ 2.44
SPOCK3-213ENST00000509854 CCDC152Q4G0S7 254 aa30.31■■■□□ 2.44
SPOCK3-213ENST00000509854 BEND3Q5T5X7 828 aa30.31■■■□□ 2.44
SPOCK3-213ENST00000509854 UBE3BQ7Z3V4 1068 aa30.31■■■□□ 2.44
SPOCK3-213ENST00000509854 SBF1O95248 1867 aa30.31■■■□□ 2.44
SPOCK3-213ENST00000509854 DDX60Q8IY21 1712 aaKnown RBP30.3■■■□□ 2.44
SPOCK3-213ENST00000509854 TMC4Q7Z404 712 aa30.3■■■□□ 2.44
SPOCK3-213ENST00000509854 CCDC85AQ96PX6 553 aaPredicted RBP30.3■■■□□ 2.44
SPOCK3-213ENST00000509854 BCL2L13Q9BXK5 485 aa30.29■■■□□ 2.44
SPOCK3-213ENST00000509854 SEC31BQ9NQW1 1179 aa30.29■■■□□ 2.44
SPOCK3-213ENST00000509854 CTSWP56202 376 aa30.28■■■□□ 2.44
SPOCK3-213ENST00000509854 SLC4A10Q6U841 1118 aa30.28■■■□□ 2.44
SPOCK3-213ENST00000509854 LAMB2P55268 1798 aa30.28■■■□□ 2.44
SPOCK3-213ENST00000509854 CT47B1P0C2W7 299 aaPredicted RBP30.27■■■□□ 2.44
SPOCK3-213ENST00000509854 C1QTNF8P60827 252 aa30.27■■■□□ 2.44
SPOCK3-213ENST00000509854 RPS8P62241 208 aaKnown RBP30.27■■■□□ 2.44
SPOCK3-213ENST00000509854 ALDH1L2Q3SY69 923 aa30.27■■■□□ 2.44
SPOCK3-213ENST00000509854 DPY19L2Q6NUT2 758 aa30.27■■■□□ 2.44
SPOCK3-213ENST00000509854 RRAGCQ9HB90 399 aa30.27■■■□□ 2.44
SPOCK3-213ENST00000509854 CASP7P55210 303 aa30.26■■■□□ 2.43
SPOCK3-213ENST00000509854 DPP8Q6V1X1 898 aaPredicted RBP30.26■■■□□ 2.43
SPOCK3-213ENST00000509854 MPNDQ8N594 471 aa30.26■■■□□ 2.43
SPOCK3-213ENST00000509854 TTLL11Q8NHH1 800 aa30.25■■■□□ 2.43
SPOCK3-213ENST00000509854 SMC4Q9NTJ3 1288 aa30.25■■■□□ 2.43
SPOCK3-213ENST00000509854 RTFDC1Q9BY42 306 aaPredicted RBP30.24■■■□□ 2.43
SPOCK3-213ENST00000509854 PTPRCP08575 1304 aa30.23■■■□□ 2.43
SPOCK3-213ENST00000509854 LARGE2Q8N3Y3 721 aa30.23■■■□□ 2.43
SPOCK3-213ENST00000509854 SUPT20HQ8NEM7 779 aa30.23■■■□□ 2.43
SPOCK3-213ENST00000509854 JDP2Q8WYK2 163 aa30.23■■■□□ 2.43
SPOCK3-213ENST00000509854 PLA2G12BQ9BX93 195 aa30.22■■■□□ 2.43
SPOCK3-213ENST00000509854 SRCIN1Q9C0H9 1055 aa30.22■■■□□ 2.43
SPOCK3-213ENST00000509854 ALDH1L1O75891 902 aa30.21■■■□□ 2.43
SPOCK3-213ENST00000509854 DDNO94850 711 aaPredicted RBP30.21■■■□□ 2.43
SPOCK3-213ENST00000509854 GREM2Q9H772 168 aa30.21■■■□□ 2.43
SPOCK3-213ENST00000509854 TIAM2Q8IVF5 1701 aa30.21■■■□□ 2.43
SPOCK3-213ENST00000509854 COL4A1P02462 1669 aa30.2■■■□□ 2.43
SPOCK3-213ENST00000509854 FZD9O00144 591 aa30.2■■■□□ 2.43
SPOCK3-213ENST00000509854 PPIP5K2O43314 1243 aa30.2■■■□□ 2.43
SPOCK3-213ENST00000509854 AOC3Q16853 763 aa30.2■■■□□ 2.43
SPOCK3-213ENST00000509854 CACNA1FO60840 1977 aa30.2■■■□□ 2.43
SPOCK3-213ENST00000509854 ZNF541Q9H0D2 1346 aa30.2■■■□□ 2.42
SPOCK3-213ENST00000509854 ANKRD18AQ8IVF6 992 aa30.19■■■□□ 2.42
SPOCK3-213ENST00000509854 VPS33BQ9H267 617 aa30.19■■■□□ 2.42
SPOCK3-213ENST00000509854 NSFL1CQ9UNZ2 370 aaKnown RBP30.19■■■□□ 2.42
SPOCK3-213ENST00000509854 GRM8O00222 908 aa30.18■■■□□ 2.42
SPOCK3-213ENST00000509854 GPSM2P81274 684 aa30.18■■■□□ 2.42
SPOCK3-213ENST00000509854 CDC5LQ99459 802 aaKnown RBP30.18■■■□□ 2.42
SPOCK3-213ENST00000509854 VEGFAP15692 232 aaPredicted RBP30.17■■■□□ 2.42
SPOCK3-213ENST00000509854 C16orf71Q8IYS4 520 aaPredicted RBP30.17■■■□□ 2.42
SPOCK3-213ENST00000509854 C9orf78Q9NZ63 289 aaPredicted RBP30.17■■■□□ 2.42
SPOCK3-213ENST00000509854 RTL9Q8NET4 1388 aa30.16■■■□□ 2.42
SPOCK3-213ENST00000509854 POTECB2RU33 542 aa30.16■■■□□ 2.42
SPOCK3-213ENST00000509854 TOMM70O94826 608 aa30.16■■■□□ 2.42
SPOCK3-213ENST00000509854 CSF1RP07333 972 aa30.16■■■□□ 2.42
SPOCK3-213ENST00000509854 RARSP54136 660 aaKnown RBP30.16■■■□□ 2.42
SPOCK3-213ENST00000509854 NIM1KQ8IY84 436 aa30.16■■■□□ 2.42
SPOCK3-213ENST00000509854 COL4A5P29400 1685 aa30.16■■■□□ 2.42
SPOCK3-213ENST00000509854 CCDC88AQ3V6T2 1871 aa30.15■■■□□ 2.42
SPOCK3-213ENST00000509854 EIF6P56537 245 aaKnown RBP30.14■■■□□ 2.42
SPOCK3-213ENST00000509854 FOXO4P98177 505 aa30.14■■■□□ 2.42
SPOCK3-213ENST00000509854 KIAA2012Q0VF49 1180 aa30.14■■■□□ 2.42
SPOCK3-213ENST00000509854 FAM161AQ3B820 660 aa30.14■■■□□ 2.42
SPOCK3-213ENST00000509854 POLLQ9UGP5 575 aa30.14■■■□□ 2.42
SPOCK3-213ENST00000509854 NOB1Q9ULX3 412 aaKnown RBP30.14■■■□□ 2.42
SPOCK3-213ENST00000509854 TAF1P21675 1872 aa30.14■■■□□ 2.42
SPOCK3-213ENST00000509854 C6orf229H3BNL8 230 aa30.13■■■□□ 2.41
SPOCK3-213ENST00000509854 ITGA6P23229 1130 aa30.13■■■□□ 2.41
SPOCK3-213ENST00000509854 BRPF1P55201 1214 aaPredicted RBP30.13■■■□□ 2.41
SPOCK3-213ENST00000509854 DICER1Q9UPY3 1922 aaKnown RBP30.12■■■□□ 2.41
SPOCK3-213ENST00000509854 ANKIB1Q9P2G1 1089 aa30.12■■■□□ 2.41
SPOCK3-213ENST00000509854 ZBED9Q6R2W3 1325 aa30.12■■■□□ 2.41
SPOCK3-213ENST00000509854 EPHA10Q5JZY3 1008 aa30.11■■■□□ 2.41
SPOCK3-213ENST00000509854 TBC1D16Q8TBP0 767 aa30.11■■■□□ 2.41
SPOCK3-213ENST00000509854 L3MBTL3Q96JM7 780 aaPredicted RBP30.11■■■□□ 2.41
SPOCK3-213ENST00000509854 BSDC1Q9NW68 430 aaPredicted RBP30.11■■■□□ 2.41
SPOCK3-213ENST00000509854 PODXL2Q9NZ53 605 aa30.11■■■□□ 2.41
SPOCK3-213ENST00000509854 IGHMBP2P38935 993 aaKnown RBP30.1■■■□□ 2.41
SPOCK3-213ENST00000509854 WASHC4Q2M389 1173 aa30.1■■■□□ 2.41
SPOCK3-213ENST00000509854 GPC2Q8N158 579 aa30.1■■■□□ 2.41
SPOCK3-213ENST00000509854 RBM46Q8TBY0 533 aaKnown RBP30.1■■■□□ 2.41
SPOCK3-213ENST00000509854 ZNRF3Q9ULT6 936 aa30.1■■■□□ 2.41
SPOCK3-213ENST00000509854 DUOX1Q9NRD9 1551 aa30.1■■■□□ 2.41
SPOCK3-213ENST00000509854 LRRC37AA6NMS7 1700 aa30.09■■■□□ 2.41
SPOCK3-213ENST00000509854 NBPF7P0C2Y1 421 aaPredicted RBP30.09■■■□□ 2.41
SPOCK3-213ENST00000509854 LMBR1LQ6UX01 489 aa30.09■■■□□ 2.41
SPOCK3-213ENST00000509854 GPR101Q96P66 508 aaPredicted RBP30.09■■■□□ 2.41
SPOCK3-213ENST00000509854 EYA3Q99504 573 aa30.09■■■□□ 2.41
SPOCK3-213ENST00000509854 GGA1Q9UJY5 639 aa30.09■■■□□ 2.41
SPOCK3-213ENST00000509854 CHMP3Q9Y3E7 222 aa30.09■■■□□ 2.41
SPOCK3-213ENST00000509854 GJA3Q9Y6H8 435 aa30.09■■■□□ 2.41
SPOCK3-213ENST00000509854 RIMBP2O15034 1052 aa30.08■■■□□ 2.41
SPOCK3-213ENST00000509854 UFL1O94874 794 aa30.08■■■□□ 2.41
SPOCK3-213ENST00000509854 SUCLG2Q96I99 432 aa30.08■■■□□ 2.41
SPOCK3-213ENST00000509854 UTYO14607 1347 aa30.07■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms