RNA–Protein interactions for RNA: ENST00000509841.1

TNIP3-204, Transcript of TNFAIP3 interacting protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TNIP3, Length 1,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP3-204ENST00000509841 TAF7LQ5H9L4 462 aa13.07□□□□□ -0.32
TNIP3-204ENST00000509841 KRT27Q7Z3Y8 459 aa13.07□□□□□ -0.32
TNIP3-204ENST00000509841 LINC00116Q8NCU8 138 aa13.07□□□□□ -0.32
TNIP3-204ENST00000509841 PI4K2BQ8TCG2 481 aa13.07□□□□□ -0.32
TNIP3-204ENST00000509841 JARID2Q92833 1246 aaPredicted RBP13.07□□□□□ -0.32
TNIP3-204ENST00000509841 UTP14AQ9BVJ6 771 aaKnown RBP13.07□□□□□ -0.32
TNIP3-204ENST00000509841 RNF39Q9H2S5 420 aa13.07□□□□□ -0.32
TNIP3-204ENST00000509841 SH3TC1Q8TE82 1336 aa13.07□□□□□ -0.32
TNIP3-204ENST00000509841 SCN7AQ01118 1682 aa13.07□□□□□ -0.32
TNIP3-204ENST00000509841 EYA2O00167 538 aa13.07□□□□□ -0.32
TNIP3-204ENST00000509841 IRS4O14654 1257 aaPredicted RBP13.07□□□□□ -0.32
TNIP3-204ENST00000509841 RPS6KA4O75676 772 aa13.07□□□□□ -0.32
TNIP3-204ENST00000509841 CTSWP56202 376 aa13.07□□□□□ -0.32
TNIP3-204ENST00000509841 TICAM2Q86XR7 235 aa13.07□□□□□ -0.32
TNIP3-204ENST00000509841 IL27Q8NEV9 243 aa13.07□□□□□ -0.32
TNIP3-204ENST00000509841 FAM89AQ96GI7 184 aa13.07□□□□□ -0.32
TNIP3-204ENST00000509841 AKAP2Q9Y2D5 859 aa13.07□□□□□ -0.32
TNIP3-204ENST00000509841 LAMB2P55268 1798 aa13.06□□□□□ -0.32
TNIP3-204ENST00000509841 TAF1LQ8IZX4 1826 aa13.06□□□□□ -0.32
TNIP3-204ENST00000509841 TNNI3KQ59H18 835 aa13.06□□□□□ -0.32
TNIP3-204ENST00000509841 RTL5Q5HYW3 569 aaPredicted RBP13.06□□□□□ -0.32
TNIP3-204ENST00000509841 SLC27A3Q5K4L6 730 aa13.06□□□□□ -0.32
TNIP3-204ENST00000509841 RUFY2Q8WXA3 655 aa13.06□□□□□ -0.32
TNIP3-204ENST00000509841 RILPL2Q969X0 211 aa13.06□□□□□ -0.32
TNIP3-204ENST00000509841 RTCBQ9Y3I0 505 aaKnown RBP13.06□□□□□ -0.32
TNIP3-204ENST00000509841 FPGT-TNNI3KV9GXZ4 949 aa13.06□□□□□ -0.32
TNIP3-204ENST00000509841 ANKRD18BA2A2Z9 1011 aa13.05□□□□□ -0.32
TNIP3-204ENST00000509841 MCCP23508 829 aa13.05□□□□□ -0.32
TNIP3-204ENST00000509841 EAF2Q96CJ1 260 aaPredicted RBP13.05□□□□□ -0.32
TNIP3-204ENST00000509841 EVI5LQ96CN4 794 aa13.05□□□□□ -0.32
TNIP3-204ENST00000509841 CEP126Q9P2H0 1117 aa13.05□□□□□ -0.32
TNIP3-204ENST00000509841 NIP7Q9Y221 180 aaKnown RBP eCLIP13.05□□□□□ -0.32
TNIP3-204ENST00000509841 TFCP2Q12800 502 aa13.04□□□□□ -0.32
TNIP3-204ENST00000509841 NYXQ9GZU5 481 aa13.04□□□□□ -0.32
TNIP3-204ENST00000509841 NARFQ9UHQ1 456 aa13.04□□□□□ -0.32
TNIP3-204ENST00000509841 UBN2Q6ZU65 1347 aa13.04□□□□□ -0.32
TNIP3-204ENST00000509841 RTL9Q8NET4 1388 aa13.04□□□□□ -0.32
TNIP3-204ENST00000509841 BRWD3Q6RI45 1802 aa13.04□□□□□ -0.32
TNIP3-204ENST00000509841 ZPR1O75312 459 aa13.03□□□□□ -0.32
TNIP3-204ENST00000509841 CHMLP26374 656 aa13.03□□□□□ -0.32
TNIP3-204ENST00000509841 TSHZ3Q63HK5 1081 aa13.03□□□□□ -0.32
TNIP3-204ENST00000509841 TTLL11Q8NHH1 800 aa13.03□□□□□ -0.32
TNIP3-204ENST00000509841 KLHDC4Q8TBB5 520 aa13.03□□□□□ -0.32
TNIP3-204ENST00000509841 C4BP0C0L5 1744 aa13.03□□□□□ -0.32
TNIP3-204ENST00000509841 RFX7Q2KHR2 1363 aa13.03□□□□□ -0.32
TNIP3-204ENST00000509841 GNPATO15228 680 aa13.03□□□□□ -0.32
TNIP3-204ENST00000509841 ATP5JP18859 108 aa13.03□□□□□ -0.32
TNIP3-204ENST00000509841 CCDC152Q4G0S7 254 aa13.03□□□□□ -0.32
TNIP3-204ENST00000509841 ATG9AQ7Z3C6 839 aa13.03□□□□□ -0.32
TNIP3-204ENST00000509841 ESYT1Q9BSJ8 1104 aa13.03□□□□□ -0.32
TNIP3-204ENST00000509841 SUSD4Q5VX71 490 aa13.02□□□□□ -0.33
TNIP3-204ENST00000509841 POTEAQ6S8J7 498 aa13.02□□□□□ -0.33
TNIP3-204ENST00000509841 CCDC8Q9H0W5 538 aaPredicted RBP13.02□□□□□ -0.33
TNIP3-204ENST00000509841 DIAPH3Q9NSV4 1193 aa13.02□□□□□ -0.33
TNIP3-204ENST00000509841 NTSR2O95665 410 aa13.01□□□□□ -0.33
TNIP3-204ENST00000509841 ITGA6P23229 1130 aa13.01□□□□□ -0.33
TNIP3-204ENST00000509841 FAM182BQ5T319 152 aa13.01□□□□□ -0.33
TNIP3-204ENST00000509841 USP26Q9BXU7 913 aa13.01□□□□□ -0.33
TNIP3-204ENST00000509841 RAD50Q92878 1312 aa13.01□□□□□ -0.33
TNIP3-204ENST00000509841 ABCC12Q96J65 1359 aa13.01□□□□□ -0.33
TNIP3-204ENST00000509841 ZNF609O15014 1411 aa13.01□□□□□ -0.33
TNIP3-204ENST00000509841 SPEF2Q9C093 1822 aa13.01□□□□□ -0.33
TNIP3-204ENST00000509841 LRRFIP1Q32MZ4 808 aaKnown RBP13□□□□□ -0.33
TNIP3-204ENST00000509841 TRAPPC3LQ5T215 181 aa13□□□□□ -0.33
TNIP3-204ENST00000509841 LDHAL6AQ6ZMR3 332 aa13□□□□□ -0.33
TNIP3-204ENST00000509841 KIAA1211Q6ZU35 1233 aa13□□□□□ -0.33
TNIP3-204ENST00000509841 HSCBQ8IWL3 235 aa13□□□□□ -0.33
TNIP3-204ENST00000509841 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13□□□□□ -0.33
TNIP3-204ENST00000509841 DBNLQ9UJU6 430 aaKnown RBP13□□□□□ -0.33
TNIP3-204ENST00000509841 COL24A1Q17RW2 1714 aa13□□□□□ -0.33
TNIP3-204ENST00000509841 LRP5O75197 1615 aa13□□□□□ -0.33
TNIP3-204ENST00000509841 MROH5Q6ZUA9 1318 aa12.99□□□□□ -0.33
TNIP3-204ENST00000509841 RXRBP28702 533 aa12.99□□□□□ -0.33
TNIP3-204ENST00000509841 RFC4P35249 363 aa12.99□□□□□ -0.33
TNIP3-204ENST00000509841 ANAPC15P60006 121 aa12.99□□□□□ -0.33
TNIP3-204ENST00000509841 RABEP1Q15276 862 aa12.99□□□□□ -0.33
TNIP3-204ENST00000509841 SNX21Q969T3 373 aa12.99□□□□□ -0.33
TNIP3-204ENST00000509841 SETDB2Q96T68 719 aa12.99□□□□□ -0.33
TNIP3-204ENST00000509841 CDC5LQ99459 802 aaKnown RBP12.99□□□□□ -0.33
TNIP3-204ENST00000509841 GREM2Q9H772 168 aa12.99□□□□□ -0.33
TNIP3-204ENST00000509841 CNNM1Q9NRU3 951 aa12.99□□□□□ -0.33
TNIP3-204ENST00000509841 DDX60Q8IY21 1712 aaKnown RBP12.99□□□□□ -0.33
TNIP3-204ENST00000509841 GTF2E1P29083 439 aaPredicted RBP12.98□□□□□ -0.33
TNIP3-204ENST00000509841 METTL24Q5JXM2 366 aa12.98□□□□□ -0.33
TNIP3-204ENST00000509841 CCDC158Q5M9N0 1113 aa12.98□□□□□ -0.33
TNIP3-204ENST00000509841 GORABQ5T7V8 394 aa12.98□□□□□ -0.33
TNIP3-204ENST00000509841 PTF1AQ7RTS3 328 aa12.98□□□□□ -0.33
TNIP3-204ENST00000509841 ZNF594Q96JF6 807 aaPredicted RBP12.98□□□□□ -0.33
TNIP3-204ENST00000509841 NEUROD6Q96NK8 337 aa12.98□□□□□ -0.33
TNIP3-204ENST00000509841 SGSM2O43147 1006 aa12.98□□□□□ -0.33
TNIP3-204ENST00000509841 CAPN15O75808 1086 aa12.98□□□□□ -0.33
TNIP3-204ENST00000509841 SSFA2P28290 1259 aa12.98□□□□□ -0.33
TNIP3-204ENST00000509841 IGHMBP2P38935 993 aaKnown RBP12.98□□□□□ -0.33
TNIP3-204ENST00000509841 LRRC24Q50LG9 513 aa12.98□□□□□ -0.33
TNIP3-204ENST00000509841 SLC10A5Q5PT55 438 aa12.98□□□□□ -0.33
TNIP3-204ENST00000509841 HAUS7Q99871 368 aa12.98□□□□□ -0.33
TNIP3-204ENST00000509841 FSD1Q9BTV5 496 aa12.98□□□□□ -0.33
TNIP3-204ENST00000509841 TLR7Q9NYK1 1049 aaKnown RBP12.98□□□□□ -0.33
TNIP3-204ENST00000509841 C4AP0C0L4 1744 aa12.97□□□□□ -0.33
TNIP3-204ENST00000509841 A0A1B0GUL7 405 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms