RNA–Protein interactions for RNA: ENST00000509677.5

SH3BP2-214, Transcript of SH3 domain binding protein 2, humanhuman

TSL 3

Gene SH3BP2, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP2-214ENST00000509677 KIF16BQ96L93 1317 aa23.07■■□□□ 1.28
SH3BP2-214ENST00000509677 CDHR2Q9BYE9 1310 aa23.07■■□□□ 1.28
SH3BP2-214ENST00000509677 PDE8AO60658 829 aa23.06■■□□□ 1.28
SH3BP2-214ENST00000509677 ALDH1L1O75891 902 aa23.06■■□□□ 1.28
SH3BP2-214ENST00000509677 SF3B3Q15393 1217 aaKnown RBP23.06■■□□□ 1.28
SH3BP2-214ENST00000509677 FRAT1Q92837 279 aaPredicted RBP23.06■■□□□ 1.28
SH3BP2-214ENST00000509677 API5Q9BZZ5 524 aaKnown RBP23.06■■□□□ 1.28
SH3BP2-214ENST00000509677 ABCC4O15439 1325 aa23.06■■□□□ 1.28
SH3BP2-214ENST00000509677 RBM46Q8TBY0 533 aaKnown RBP23.05■■□□□ 1.28
SH3BP2-214ENST00000509677 CCDC85AQ96PX6 553 aaPredicted RBP23.05■■□□□ 1.28
SH3BP2-214ENST00000509677 C9orf78Q9NZ63 289 aaPredicted RBP23.05■■□□□ 1.28
SH3BP2-214ENST00000509677 GRM8O00222 908 aa23.04■■□□□ 1.28
SH3BP2-214ENST00000509677 CASP7P55210 303 aa23.04■■□□□ 1.28
SH3BP2-214ENST00000509677 OLFM4Q6UX06 510 aa23.04■■□□□ 1.28
SH3BP2-214ENST00000509677 DNAJC5GQ8N7S2 189 aa23.04■■□□□ 1.28
SH3BP2-214ENST00000509677 C7orf43Q8WVR3 580 aa23.04■■□□□ 1.28
SH3BP2-214ENST00000509677 RRAGCQ9HB90 399 aa23.04■■□□□ 1.28
SH3BP2-214ENST00000509677 IPO8O15397 1037 aaKnown RBP23.03■■□□□ 1.28
SH3BP2-214ENST00000509677 CCDC152Q4G0S7 254 aa23.03■■□□□ 1.28
SH3BP2-214ENST00000509677 SLX4Q8IY92 1834 aa23.03■■□□□ 1.28
SH3BP2-214ENST00000509677 FER1L6Q2WGJ9 1857 aa23.02■■□□□ 1.28
SH3BP2-214ENST00000509677 DDX60Q8IY21 1712 aaKnown RBP23.02■■□□□ 1.28
SH3BP2-214ENST00000509677 PPEF1O14829 653 aaPredicted RBP23.02■■□□□ 1.28
SH3BP2-214ENST00000509677 CTSWP56202 376 aa23.02■■□□□ 1.28
SH3BP2-214ENST00000509677 RASSF7Q02833 373 aa23.02■■□□□ 1.28
SH3BP2-214ENST00000509677 GRAPQ13588 217 aa23.02■■□□□ 1.28
SH3BP2-214ENST00000509677 SOGA3Q5TF21 947 aa23.02■■□□□ 1.28
SH3BP2-214ENST00000509677 GRAPLQ8TC17 118 aaPredicted RBP23.02■■□□□ 1.28
SH3BP2-214ENST00000509677 ARHGAP45Q92619 1136 aa23.02■■□□□ 1.28
SH3BP2-214ENST00000509677 HTRA3P83110 453 aa23.01■■□□□ 1.27
SH3BP2-214ENST00000509677 CCDC93Q567U6 631 aa23.01■■□□□ 1.27
SH3BP2-214ENST00000509677 NFKBIEO00221 500 aa23■■□□□ 1.27
SH3BP2-214ENST00000509677 BBOX1O75936 387 aa23■■□□□ 1.27
SH3BP2-214ENST00000509677 SLC51AQ86UW1 340 aa23■■□□□ 1.27
SH3BP2-214ENST00000509677 PLA2G12BQ9BX93 195 aa23■■□□□ 1.27
SH3BP2-214ENST00000509677 SEC31BQ9NQW1 1179 aa23■■□□□ 1.27
SH3BP2-214ENST00000509677 TRIM27P14373 513 aa22.99■■□□□ 1.27
SH3BP2-214ENST00000509677 CCT4P50991 539 aaKnown RBP22.99■■□□□ 1.27
SH3BP2-214ENST00000509677 FSTL1Q12841 308 aa22.99■■□□□ 1.27
SH3BP2-214ENST00000509677 ATF7IPQ6VMQ6 1270 aa22.99■■□□□ 1.27
SH3BP2-214ENST00000509677 TTLL11Q8NHH1 800 aa22.99■■□□□ 1.27
SH3BP2-214ENST00000509677 CELF1Q92879 486 aaKnown RBP22.99■■□□□ 1.27
SH3BP2-214ENST00000509677 TNNQ9UQP3 1299 aa22.99■■□□□ 1.27
SH3BP2-214ENST00000509677 NBPF7P0C2Y1 421 aaPredicted RBP22.98■■□□□ 1.27
SH3BP2-214ENST00000509677 ZKSCAN2Q63HK3 967 aa22.98■■□□□ 1.27
SH3BP2-214ENST00000509677 TMX4Q9H1E5 349 aaPredicted RBP22.98■■□□□ 1.27
SH3BP2-214ENST00000509677 GREM2Q9H772 168 aa22.98■■□□□ 1.27
SH3BP2-214ENST00000509677 LAMB2P55268 1798 aa22.98■■□□□ 1.27
SH3BP2-214ENST00000509677 CC2D2BQ6DHV5 1058 aa22.97■■□□□ 1.27
SH3BP2-214ENST00000509677 RTKN2Q8IZC4 609 aa22.97■■□□□ 1.27
SH3BP2-214ENST00000509677 CLUAP1Q96AJ1 413 aa22.97■■□□□ 1.27
SH3BP2-214ENST00000509677 TAOK3Q9H2K8 898 aa22.97■■□□□ 1.27
SH3BP2-214ENST00000509677 ATP6V0A2Q9Y487 856 aa22.97■■□□□ 1.27
SH3BP2-214ENST00000509677 PCNTO95613 3336 aa22.97■■□□□ 1.27
SH3BP2-214ENST00000509677 RPS8P62241 208 aaKnown RBP22.96■■□□□ 1.27
SH3BP2-214ENST00000509677 RCAN3Q9UKA8 241 aa22.96■■□□□ 1.27
SH3BP2-214ENST00000509677 UTYO14607 1347 aa22.95■■□□□ 1.26
SH3BP2-214ENST00000509677 LMNB1P20700 586 aa22.95■■□□□ 1.26
SH3BP2-214ENST00000509677 PRELPP51888 382 aa22.95■■□□□ 1.26
SH3BP2-214ENST00000509677 FOXO4P98177 505 aa22.95■■□□□ 1.26
SH3BP2-214ENST00000509677 FAM161AQ3B820 660 aa22.95■■□□□ 1.26
SH3BP2-214ENST00000509677 EPHA10Q5JZY3 1008 aa22.95■■□□□ 1.26
SH3BP2-214ENST00000509677 SUCLG2Q96I99 432 aa22.95■■□□□ 1.26
SH3BP2-214ENST00000509677 USP44Q9H0E7 712 aa22.95■■□□□ 1.26
SH3BP2-214ENST00000509677 CHMP3Q9Y3E7 222 aa22.95■■□□□ 1.26
SH3BP2-214ENST00000509677 CSF1RP07333 972 aa22.94■■□□□ 1.26
SH3BP2-214ENST00000509677 TMC4Q7Z404 712 aa22.94■■□□□ 1.26
SH3BP2-214ENST00000509677 SP8Q8IXZ3 490 aa22.94■■□□□ 1.26
SH3BP2-214ENST00000509677 FKBP4Q02790 459 aaKnown RBP eCLIP22.93■■□□□ 1.26
SH3BP2-214ENST00000509677 INTS3Q68E01 1043 aaKnown RBP22.93■■□□□ 1.26
SH3BP2-214ENST00000509677 LMBR1LQ6UX01 489 aa22.93■■□□□ 1.26
SH3BP2-214ENST00000509677 ANKRD18AQ8IVF6 992 aa22.93■■□□□ 1.26
SH3BP2-214ENST00000509677 KLRG1Q96E93 195 aa22.93■■□□□ 1.26
SH3BP2-214ENST00000509677 CDC5LQ99459 802 aaKnown RBP22.93■■□□□ 1.26
SH3BP2-214ENST00000509677 RTL9Q8NET4 1388 aa22.92■■□□□ 1.26
SH3BP2-214ENST00000509677 LTBP3Q9NS15 1303 aa22.92■■□□□ 1.26
SH3BP2-214ENST00000509677 ITGA6P23229 1130 aa22.92■■□□□ 1.26
SH3BP2-214ENST00000509677 FTSJ3Q8IY81 847 aaKnown RBP22.92■■□□□ 1.26
SH3BP2-214ENST00000509677 SMC1BQ8NDV3 1235 aa22.92■■□□□ 1.26
SH3BP2-214ENST00000509677 KAZALD1Q96I82 304 aa22.92■■□□□ 1.26
SH3BP2-214ENST00000509677 ZNF277Q9NRM2 450 aaPredicted RBP22.92■■□□□ 1.26
SH3BP2-214ENST00000509677 COL4A1P02462 1669 aa22.91■■□□□ 1.26
SH3BP2-214ENST00000509677 ZC3H4Q9UPT8 1303 aaKnown RBP22.91■■□□□ 1.26
SH3BP2-214ENST00000509677 GRIPAP1Q4V328 841 aa22.91■■□□□ 1.26
SH3BP2-214ENST00000509677 GLTPD2A6NH11 291 aa22.9■■□□□ 1.26
SH3BP2-214ENST00000509677 DPP8Q6V1X1 898 aaPredicted RBP22.9■■□□□ 1.26
SH3BP2-214ENST00000509677 MPNDQ8N594 471 aa22.9■■□□□ 1.26
SH3BP2-214ENST00000509677 TMEM57Q8N5G2 664 aa22.9■■□□□ 1.26
SH3BP2-214ENST00000509677 BICC1Q9H694 974 aaKnown RBP22.9■■□□□ 1.26
SH3BP2-214ENST00000509677 SNED1Q8TER0 1413 aa22.9■■□□□ 1.26
SH3BP2-214ENST00000509677 TAF1P21675 1872 aa22.9■■□□□ 1.26
SH3BP2-214ENST00000509677 ANKRD18BA2A2Z9 1011 aa22.89■■□□□ 1.25
SH3BP2-214ENST00000509677 UBTFL1P0CB47 393 aaPredicted RBP22.89■■□□□ 1.25
SH3BP2-214ENST00000509677 VEGFAP15692 232 aaPredicted RBP22.89■■□□□ 1.25
SH3BP2-214ENST00000509677 IFIT5Q13325 482 aaKnown RBP22.89■■□□□ 1.25
SH3BP2-214ENST00000509677 DZIP1LQ8IYY4 767 aaKnown RBP22.89■■□□□ 1.25
SH3BP2-214ENST00000509677 PSMD1Q99460 953 aa22.89■■□□□ 1.25
SH3BP2-214ENST00000509677 MEIS3Q99687 375 aa22.89■■□□□ 1.25
SH3BP2-214ENST00000509677 IGHMBP2P38935 993 aaKnown RBP22.88■■□□□ 1.25
SH3BP2-214ENST00000509677 NSFL1CQ9UNZ2 370 aaKnown RBP22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 177.1 ms