RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 CRKLP46109 303 aaKnown RBP17.98■□□□□ 0.47
PHF3-209ENST00000509330 SNRKQ9NRH2 765 aa17.98■□□□□ 0.47
PHF3-209ENST00000509330 GOLIM4O00461 696 aa17.97■□□□□ 0.47
PHF3-209ENST00000509330 COL9A3Q14050 684 aaPredicted RBP17.97■□□□□ 0.47
PHF3-209ENST00000509330 ADCK5Q3MIX3 580 aa17.97■□□□□ 0.47
PHF3-209ENST00000509330 ZBTB38Q8NAP3 1195 aaPredicted RBP17.97■□□□□ 0.47
PHF3-209ENST00000509330 GREM2Q9H772 168 aa17.97■□□□□ 0.47
PHF3-209ENST00000509330 TJP1Q07157 1748 aa17.97■□□□□ 0.47
PHF3-209ENST00000509330 A0A1B0GUL7 405 aa17.97■□□□□ 0.47
PHF3-209ENST00000509330 RAB3GAP1Q15042 981 aa17.97■□□□□ 0.47
PHF3-209ENST00000509330 CASTP20810 708 aaKnown RBP17.97■□□□□ 0.47
PHF3-209ENST00000509330 THRAP3Q9Y2W1 955 aaKnown RBP17.97■□□□□ 0.47
PHF3-209ENST00000509330 UBN2Q6ZU65 1347 aa17.96■□□□□ 0.47
PHF3-209ENST00000509330 PCCAP05165 728 aaPredicted RBP17.96■□□□□ 0.47
PHF3-209ENST00000509330 ADORA1P30542 326 aa17.96■□□□□ 0.47
PHF3-209ENST00000509330 TCEANC2Q96MN5 208 aa17.96■□□□□ 0.47
PHF3-209ENST00000509330 IRS4O14654 1257 aaPredicted RBP17.96■□□□□ 0.47
PHF3-209ENST00000509330 HCLS1P14317 486 aaPredicted RBP17.96■□□□□ 0.47
PHF3-209ENST00000509330 IL15P40933 162 aaPredicted RBP17.96■□□□□ 0.47
PHF3-209ENST00000509330 IFIT5Q13325 482 aaKnown RBP17.96■□□□□ 0.47
PHF3-209ENST00000509330 FOXD4L6Q3SYB3 417 aaPredicted RBP17.96■□□□□ 0.47
PHF3-209ENST00000509330 FOXD4L3Q6VB84 417 aaPredicted RBP17.96■□□□□ 0.47
PHF3-209ENST00000509330 CDCA7Q9BWT1 371 aaPredicted RBP17.96■□□□□ 0.47
PHF3-209ENST00000509330 TAF6LQ9Y6J9 622 aa17.96■□□□□ 0.47
PHF3-209ENST00000509330 EP400Q96L91 3159 aa17.96■□□□□ 0.46
PHF3-209ENST00000509330 ATP5JP18859 108 aa17.95■□□□□ 0.46
PHF3-209ENST00000509330 JAKMIP1Q96N16 626 aaKnown RBP17.95■□□□□ 0.46
PHF3-209ENST00000509330 RBM8AQ9Y5S9 174 aaKnown RBP17.95■□□□□ 0.46
PHF3-209ENST00000509330 CCDC171Q6TFL3 1326 aa17.95■□□□□ 0.46
PHF3-209ENST00000509330 ITGA6P23229 1130 aa17.95■□□□□ 0.46
PHF3-209ENST00000509330 ANAPC15P60006 121 aa17.95■□□□□ 0.46
PHF3-209ENST00000509330 INTS5Q6P9B9 1019 aaKnown RBP17.95■□□□□ 0.46
PHF3-209ENST00000509330 CEP126Q9P2H0 1117 aa17.95■□□□□ 0.46
PHF3-209ENST00000509330 PALLDQ8WX93 1383 aa17.95■□□□□ 0.46
PHF3-209ENST00000509330 GORABQ5T7V8 394 aa17.94■□□□□ 0.46
PHF3-209ENST00000509330 FKBP4Q02790 459 aaKnown RBP eCLIP17.94■□□□□ 0.46
PHF3-209ENST00000509330 CCDC87Q9NVE4 849 aa17.94■□□□□ 0.46
PHF3-209ENST00000509330 COL15A1P39059 1388 aa17.94■□□□□ 0.46
PHF3-209ENST00000509330 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.94■□□□□ 0.46
PHF3-209ENST00000509330 IL6STP40189 918 aaPredicted RBP17.94■□□□□ 0.46
PHF3-209ENST00000509330 HELBQ8NG08 1087 aaPredicted RBP17.93■□□□□ 0.46
PHF3-209ENST00000509330 CIZ1Q9ULV3 898 aaPredicted RBP17.93■□□□□ 0.46
PHF3-209ENST00000509330 PI16Q6UXB8 463 aa17.93■□□□□ 0.46
PHF3-209ENST00000509330 LDHAL6AQ6ZMR3 332 aa17.93■□□□□ 0.46
PHF3-209ENST00000509330 TRAK2O60296 914 aa17.92■□□□□ 0.46
PHF3-209ENST00000509330 SLIT2O94813 1529 aa17.92■□□□□ 0.46
PHF3-209ENST00000509330 AK2P54819 239 aa17.92■□□□□ 0.46
PHF3-209ENST00000509330 HSP90AB3PQ58FF7 597 aa17.92■□□□□ 0.46
PHF3-209ENST00000509330 TTLL11Q8NHH1 800 aa17.92■□□□□ 0.46
PHF3-209ENST00000509330 CNNM1Q9NRU3 951 aa17.92■□□□□ 0.46
PHF3-209ENST00000509330 NRAPQ86VF7 1730 aa17.92■□□□□ 0.46
PHF3-209ENST00000509330 IFIT1P09914 478 aaKnown RBP17.92■□□□□ 0.46
PHF3-209ENST00000509330 TRIM28Q13263 835 aaKnown RBP17.92■□□□□ 0.46
PHF3-209ENST00000509330 SNAP23O00161 211 aa17.91■□□□□ 0.46
PHF3-209ENST00000509330 METTL24Q5JXM2 366 aa17.91■□□□□ 0.46
PHF3-209ENST00000509330 SUSD4Q5VX71 490 aa17.91■□□□□ 0.46
PHF3-209ENST00000509330 BICDL1Q6ZP65 573 aa17.91■□□□□ 0.46
PHF3-209ENST00000509330 HAUS7Q99871 368 aa17.91■□□□□ 0.46
PHF3-209ENST00000509330 USP21Q9UK80 565 aa17.91■□□□□ 0.46
PHF3-209ENST00000509330 EIF5P55010 431 aaKnown RBP17.91■□□□□ 0.46
PHF3-209ENST00000509330 CTSWP56202 376 aa17.91■□□□□ 0.46
PHF3-209ENST00000509330 CREB3L3Q68CJ9 461 aa17.91■□□□□ 0.46
PHF3-209ENST00000509330 GBP4Q96PP9 640 aa17.91■□□□□ 0.46
PHF3-209ENST00000509330 PAG1Q9NWQ8 432 aa17.91■□□□□ 0.46
PHF3-209ENST00000509330 BARGINQ6ZT62 677 aa17.9■□□□□ 0.46
PHF3-209ENST00000509330 HIP1O00291 1037 aa17.9■□□□□ 0.46
PHF3-209ENST00000509330 SCARF1Q14162 830 aa17.9■□□□□ 0.46
PHF3-209ENST00000509330 MEX3CQ5U5Q3 659 aaKnown RBP17.9■□□□□ 0.46
PHF3-209ENST00000509330 MCTP1Q6DN14 999 aa17.9■□□□□ 0.46
PHF3-209ENST00000509330 XAGE2Q96GT9 111 aa17.9■□□□□ 0.46
PHF3-209ENST00000509330 NIP7Q9Y221 180 aaKnown RBP eCLIP17.9■□□□□ 0.46
PHF3-209ENST00000509330 LARGE1O95461 756 aa17.89■□□□□ 0.45
PHF3-209ENST00000509330 LRP6O75581 1613 aa17.89■□□□□ 0.45
PHF3-209ENST00000509330 NECTIN1Q15223 517 aa17.89■□□□□ 0.45
PHF3-209ENST00000509330 TTC39AQ5SRH9 613 aa17.89■□□□□ 0.45
PHF3-209ENST00000509330 ZNF609O15014 1411 aa17.89■□□□□ 0.45
PHF3-209ENST00000509330 BCL9LQ86UU0 1499 aa17.89■□□□□ 0.45
PHF3-209ENST00000509330 ANKRD18BA2A2Z9 1011 aa17.88■□□□□ 0.45
PHF3-209ENST00000509330 SLC27A2O14975 620 aa17.88■□□□□ 0.45
PHF3-209ENST00000509330 CSF1RP07333 972 aa17.88■□□□□ 0.45
PHF3-209ENST00000509330 ZKSCAN1P17029 563 aaPredicted RBP17.88■□□□□ 0.45
PHF3-209ENST00000509330 TPRNQ4KMQ1 711 aa17.88■□□□□ 0.45
PHF3-209ENST00000509330 RUFY3Q7L099 469 aa17.88■□□□□ 0.45
PHF3-209ENST00000509330 WNK3Q9BYP7 1800 aa17.88■□□□□ 0.45
PHF3-209ENST00000509330 VPS53Q5VIR6 699 aa17.88■□□□□ 0.45
PHF3-209ENST00000509330 MAP4K1Q92918 833 aa17.88■□□□□ 0.45
PHF3-209ENST00000509330 SEC31BQ9NQW1 1179 aa17.88■□□□□ 0.45
PHF3-209ENST00000509330 ZDHHC9Q9Y397 364 aa17.88■□□□□ 0.45
PHF3-209ENST00000509330 BAG4O95429 457 aaKnown RBP17.88■□□□□ 0.45
PHF3-209ENST00000509330 LINC00116Q8NCU8 138 aa17.88■□□□□ 0.45
PHF3-209ENST00000509330 PDRG1Q9NUG6 133 aa17.88■□□□□ 0.45
PHF3-209ENST00000509330 DDX11L8A8MPP1 907 aa17.87■□□□□ 0.45
PHF3-209ENST00000509330 KBTBD3Q8NAB2 608 aa17.87■□□□□ 0.45
PHF3-209ENST00000509330 JCADQ9P266 1359 aa17.87■□□□□ 0.45
PHF3-209ENST00000509330 TAF5LO75529 589 aa17.87■□□□□ 0.45
PHF3-209ENST00000509330 CIAO1O76071 339 aa17.87■□□□□ 0.45
PHF3-209ENST00000509330 ZNF34Q8IZ26 560 aa17.87■□□□□ 0.45
PHF3-209ENST00000509330 CCDC24Q8N4L8 307 aa17.87■□□□□ 0.45
PHF3-209ENST00000509330 MED23Q9ULK4 1368 aa17.86■□□□□ 0.45
PHF3-209ENST00000509330 CAMTA2O94983 1202 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms