RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 HDGFL1Q5TGJ6 251 aa9.38□□□□□ -0.91
TOPBP1-207ENST00000509162 NGEFQ8N5V2 710 aa9.38□□□□□ -0.91
TOPBP1-207ENST00000509162 XAGE3Q8WTP9 111 aa9.38□□□□□ -0.91
TOPBP1-207ENST00000509162 CDCA7LQ96GN5 454 aa9.38□□□□□ -0.91
TOPBP1-207ENST00000509162 PHAXQ9H814 394 aaKnown RBP9.38□□□□□ -0.91
TOPBP1-207ENST00000509162 CD2APQ9Y5K6 639 aa9.38□□□□□ -0.91
TOPBP1-207ENST00000509162 RIC1Q4ADV7 1423 aa9.38□□□□□ -0.91
TOPBP1-207ENST00000509162 IBTKQ9P2D0 1353 aaPredicted RBP9.37□□□□□ -0.91
TOPBP1-207ENST00000509162 A0A087WZG4 1122 aa9.37□□□□□ -0.91
TOPBP1-207ENST00000509162 ZPR1O75312 459 aa9.37□□□□□ -0.91
TOPBP1-207ENST00000509162 NTSR2O95665 410 aa9.37□□□□□ -0.91
TOPBP1-207ENST00000509162 SERPINB2P05120 415 aa9.37□□□□□ -0.91
TOPBP1-207ENST00000509162 EXOSC9Q06265 439 aaKnown RBP9.37□□□□□ -0.91
TOPBP1-207ENST00000509162 G2E3Q7L622 706 aa9.37□□□□□ -0.91
TOPBP1-207ENST00000509162 ZNF428Q96B54 188 aa9.37□□□□□ -0.91
TOPBP1-207ENST00000509162 DDX21Q9NR30 783 aaKnown RBP eCLIP9.37□□□□□ -0.91
TOPBP1-207ENST00000509162 LRRC37AA6NMS7 1700 aa9.36□□□□□ -0.91
TOPBP1-207ENST00000509162 SLX4Q8IY92 1834 aa9.36□□□□□ -0.91
TOPBP1-207ENST00000509162 A0A0G2JLW4 131 aa9.36□□□□□ -0.91
TOPBP1-207ENST00000509162 KIF3CO14782 793 aa9.36□□□□□ -0.91
TOPBP1-207ENST00000509162 PRELPP51888 382 aa9.36□□□□□ -0.91
TOPBP1-207ENST00000509162 COPS6Q7L5N1 327 aa9.36□□□□□ -0.91
TOPBP1-207ENST00000509162 WDR63Q8IWG1 891 aa9.36□□□□□ -0.91
TOPBP1-207ENST00000509162 ZNF34Q8IZ26 560 aa9.36□□□□□ -0.91
TOPBP1-207ENST00000509162 HS3ST6Q96QI5 342 aa9.36□□□□□ -0.91
TOPBP1-207ENST00000509162 PARP3Q9Y6F1 533 aa9.36□□□□□ -0.91
TOPBP1-207ENST00000509162 GPTP24298 496 aa9.35□□□□□ -0.91
TOPBP1-207ENST00000509162 TWISTNBQ3B726 338 aaPredicted RBP9.35□□□□□ -0.91
TOPBP1-207ENST00000509162 SUSD4Q5VX71 490 aa9.35□□□□□ -0.91
TOPBP1-207ENST00000509162 TRMT2AQ8IZ69 625 aaKnown RBP9.35□□□□□ -0.91
TOPBP1-207ENST00000509162 SYNE4Q8N205 404 aa9.35□□□□□ -0.91
TOPBP1-207ENST00000509162 COL4A5P29400 1685 aa9.35□□□□□ -0.91
TOPBP1-207ENST00000509162 DUOX1Q9NRD9 1551 aa9.34□□□□□ -0.91
TOPBP1-207ENST00000509162 TESPA1A2RU30 521 aaPredicted RBP9.34□□□□□ -0.91
TOPBP1-207ENST00000509162 FAM205CA6NFA0 338 aa9.34□□□□□ -0.91
TOPBP1-207ENST00000509162 ERVV-1B6SEH8 477 aa9.34□□□□□ -0.91
TOPBP1-207ENST00000509162 VAMP4O75379 141 aa9.34□□□□□ -0.91
TOPBP1-207ENST00000509162 HMGB2P26583 209 aaKnown RBP9.34□□□□□ -0.91
TOPBP1-207ENST00000509162 CALD1Q05682 793 aaKnown RBP9.34□□□□□ -0.91
TOPBP1-207ENST00000509162 GIGYF2Q6Y7W6 1299 aaKnown RBP9.34□□□□□ -0.91
TOPBP1-207ENST00000509162 NUTM1Q86Y26 1132 aa9.34□□□□□ -0.91
TOPBP1-207ENST00000509162 ISCA1Q9BUE6 129 aa9.34□□□□□ -0.91
TOPBP1-207ENST00000509162 NIP7Q9Y221 180 aaKnown RBP eCLIP9.34□□□□□ -0.91
TOPBP1-207ENST00000509162 TAF1P21675 1872 aa9.34□□□□□ -0.91
TOPBP1-207ENST00000509162 LTBP1Q14766 1721 aa9.34□□□□□ -0.92
TOPBP1-207ENST00000509162 TIAM2Q8IVF5 1701 aa9.34□□□□□ -0.92
TOPBP1-207ENST00000509162 FAM177BA6PVY3 158 aa9.33□□□□□ -0.92
TOPBP1-207ENST00000509162 BRPF1P55201 1214 aaPredicted RBP9.33□□□□□ -0.92
TOPBP1-207ENST00000509162 SLFN5Q08AF3 891 aa9.33□□□□□ -0.92
TOPBP1-207ENST00000509162 AIMP1Q12904 312 aaKnown RBP9.33□□□□□ -0.92
TOPBP1-207ENST00000509162 E2F4Q16254 413 aa9.33□□□□□ -0.92
TOPBP1-207ENST00000509162 ERFEQ4G0M1 354 aa9.33□□□□□ -0.92
TOPBP1-207ENST00000509162 CLEC4GQ6UXB4 293 aa9.33□□□□□ -0.92
TOPBP1-207ENST00000509162 NLRP10Q86W26 655 aa9.33□□□□□ -0.92
TOPBP1-207ENST00000509162 CNBD1Q8NA66 436 aa9.33□□□□□ -0.92
TOPBP1-207ENST00000509162 ZC3H15Q8WU90 426 aaKnown RBP9.33□□□□□ -0.92
TOPBP1-207ENST00000509162 FER1L6Q2WGJ9 1857 aa9.33□□□□□ -0.92
TOPBP1-207ENST00000509162 CHD4Q14839 1912 aa9.33□□□□□ -0.92
TOPBP1-207ENST00000509162 POTEB3A0JP26 581 aa9.32□□□□□ -0.92
TOPBP1-207ENST00000509162 KLRG2A4D1S0 409 aaPredicted RBP9.32□□□□□ -0.92
TOPBP1-207ENST00000509162 IGKV5-2P06315 115 aa9.32□□□□□ -0.92
TOPBP1-207ENST00000509162 POTEBQ6S5H4 581 aa9.32□□□□□ -0.92
TOPBP1-207ENST00000509162 OLFM4Q6UX06 510 aa9.32□□□□□ -0.92
TOPBP1-207ENST00000509162 KIF6Q6ZMV9 814 aa9.32□□□□□ -0.92
TOPBP1-207ENST00000509162 DBF4Q9UBU7 674 aaPredicted RBP9.32□□□□□ -0.92
TOPBP1-207ENST00000509162 C2orf72A6NCS6 295 aa9.31□□□□□ -0.92
TOPBP1-207ENST00000509162 ATP5J2-PTCD1G3V325 749 aa9.31□□□□□ -0.92
TOPBP1-207ENST00000509162 TGFB2P61812 414 aa9.31□□□□□ -0.92
TOPBP1-207ENST00000509162 CRY2Q49AN0 593 aa9.31□□□□□ -0.92
TOPBP1-207ENST00000509162 GPR153Q6NV75 609 aa9.31□□□□□ -0.92
TOPBP1-207ENST00000509162 C2CD5Q86YS7 1000 aa9.31□□□□□ -0.92
TOPBP1-207ENST00000509162 PLBD2Q8NHP8 589 aa9.31□□□□□ -0.92
TOPBP1-207ENST00000509162 SETDB2Q96T68 719 aa9.31□□□□□ -0.92
TOPBP1-207ENST00000509162 ARIH1Q9Y4X5 557 aaPredicted RBP9.31□□□□□ -0.92
TOPBP1-207ENST00000509162 SBF1O95248 1867 aa9.31□□□□□ -0.92
TOPBP1-207ENST00000509162 A0A1B0GUL6 1792 aa9.3□□□□□ -0.92
TOPBP1-207ENST00000509162 NFKBIEO00221 500 aa9.3□□□□□ -0.92
TOPBP1-207ENST00000509162 SRGNP10124 158 aa9.3□□□□□ -0.92
TOPBP1-207ENST00000509162 RASSF7Q02833 373 aa9.3□□□□□ -0.92
TOPBP1-207ENST00000509162 TCIRG1Q13488 830 aa9.3□□□□□ -0.92
TOPBP1-207ENST00000509162 NBPF5PQ86XG9 351 aaPredicted RBP9.3□□□□□ -0.92
TOPBP1-207ENST00000509162 TMC2Q8TDI7 906 aa9.3□□□□□ -0.92
TOPBP1-207ENST00000509162 BRIP1Q9BX63 1249 aa9.3□□□□□ -0.92
TOPBP1-207ENST00000509162 ZNF652Q9Y2D9 606 aa9.3□□□□□ -0.92
TOPBP1-207ENST00000509162 CACNA1FO60840 1977 aa9.3□□□□□ -0.92
TOPBP1-207ENST00000509162 FLIIQ13045 1269 aa9.29□□□□□ -0.92
TOPBP1-207ENST00000509162 MFSD10Q14728 455 aa9.29□□□□□ -0.92
TOPBP1-207ENST00000509162 C7orf43Q8WVR3 580 aa9.29□□□□□ -0.92
TOPBP1-207ENST00000509162 HYPKQ9NX55 129 aa9.29□□□□□ -0.92
TOPBP1-207ENST00000509162 BCS1LQ9Y276 419 aa9.29□□□□□ -0.92
TOPBP1-207ENST00000509162 SPEF2Q9C093 1822 aa9.28□□□□□ -0.92
TOPBP1-207ENST00000509162 E9PSI1 815 aa9.28□□□□□ -0.92
TOPBP1-207ENST00000509162 F6X3S4 739 aa9.28□□□□□ -0.92
TOPBP1-207ENST00000509162 CASP7P55210 303 aa9.28□□□□□ -0.92
TOPBP1-207ENST00000509162 GPR162Q16538 588 aa9.28□□□□□ -0.92
TOPBP1-207ENST00000509162 CCDC30Q5VVM6 783 aa9.28□□□□□ -0.92
TOPBP1-207ENST00000509162 ANKRD13DQ6ZTN6 518 aa9.28□□□□□ -0.92
TOPBP1-207ENST00000509162 MRPL50Q8N5N7 158 aaKnown RBP9.28□□□□□ -0.92
TOPBP1-207ENST00000509162 JARID2Q92833 1246 aaPredicted RBP9.28□□□□□ -0.92
TOPBP1-207ENST00000509162 MYD88Q99836 296 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms