RNA–Protein interactions for RNA: ENST00000508559.1

BRCC3P1-201, Transcript of BRCA1/BRCA2-containing complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene BRCC3P1, Length 951 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P1-201ENST00000508559 PPP1R1BQ9UD71 204 aaPredicted RBP13.71□□□□□ -0.21
BRCC3P1-201ENST00000508559 ABCC12Q96J65 1359 aa13.71□□□□□ -0.22
BRCC3P1-201ENST00000508559 ANKRD18BA2A2Z9 1011 aa13.7□□□□□ -0.22
BRCC3P1-201ENST00000508559 B4GALNT3Q6L9W6 998 aa13.7□□□□□ -0.22
BRCC3P1-201ENST00000508559 DDX46Q7L014 1031 aaKnown RBP13.7□□□□□ -0.22
BRCC3P1-201ENST00000508559 KLHL34Q8N239 644 aa13.7□□□□□ -0.22
BRCC3P1-201ENST00000508559 TTLL11Q8NHH1 800 aa13.7□□□□□ -0.22
BRCC3P1-201ENST00000508559 KAZALD1Q96I82 304 aa13.7□□□□□ -0.22
BRCC3P1-201ENST00000508559 BRIP1Q9BX63 1249 aa13.7□□□□□ -0.22
BRCC3P1-201ENST00000508559 PNMA6EA0A0J9YXQ4 647 aa13.69□□□□□ -0.22
BRCC3P1-201ENST00000508559 ITGA6P23229 1130 aa13.69□□□□□ -0.22
BRCC3P1-201ENST00000508559 G3BP1Q13283 466 aaKnown RBP eCLIP13.69□□□□□ -0.22
BRCC3P1-201ENST00000508559 FAM161AQ3B820 660 aa13.69□□□□□ -0.22
BRCC3P1-201ENST00000508559 RABL6Q3YEC7 729 aaPredicted RBP13.69□□□□□ -0.22
BRCC3P1-201ENST00000508559 RBM17Q96I25 401 aaKnown RBP13.69□□□□□ -0.22
BRCC3P1-201ENST00000508559 CDC5LQ99459 802 aaKnown RBP13.69□□□□□ -0.22
BRCC3P1-201ENST00000508559 COL24A1Q17RW2 1714 aa13.69□□□□□ -0.22
BRCC3P1-201ENST00000508559 H0YIN7 160 aa13.68□□□□□ -0.22
BRCC3P1-201ENST00000508559 SURF6O75683 361 aaKnown RBP13.68□□□□□ -0.22
BRCC3P1-201ENST00000508559 CSF1RP07333 972 aa13.68□□□□□ -0.22
BRCC3P1-201ENST00000508559 IGHMBP2P38935 993 aaKnown RBP13.68□□□□□ -0.22
BRCC3P1-201ENST00000508559 MTX1Q13505 466 aa13.68□□□□□ -0.22
BRCC3P1-201ENST00000508559 HDAC1Q13547 482 aaPredicted RBP13.68□□□□□ -0.22
BRCC3P1-201ENST00000508559 SF3B3Q15393 1217 aaKnown RBP13.68□□□□□ -0.22
BRCC3P1-201ENST00000508559 HSP90AB4PQ58FF6 505 aa13.68□□□□□ -0.22
BRCC3P1-201ENST00000508559 SSH3Q8TE77 659 aa13.68□□□□□ -0.22
BRCC3P1-201ENST00000508559 BCL11AQ9H165 835 aa13.68□□□□□ -0.22
BRCC3P1-201ENST00000508559 SIL1Q9H173 461 aa13.68□□□□□ -0.22
BRCC3P1-201ENST00000508559 GREM2Q9H772 168 aa13.68□□□□□ -0.22
BRCC3P1-201ENST00000508559 APBB1O00213 710 aa13.67□□□□□ -0.22
BRCC3P1-201ENST00000508559 C3orf67Q6ZVT6 689 aa13.67□□□□□ -0.22
BRCC3P1-201ENST00000508559 C2CD5Q86YS7 1000 aa13.67□□□□□ -0.22
BRCC3P1-201ENST00000508559 SIRT2Q8IXJ6 389 aa13.67□□□□□ -0.22
BRCC3P1-201ENST00000508559 MPHOSPH8Q99549 860 aa13.67□□□□□ -0.22
BRCC3P1-201ENST00000508559 CNNM1Q9NRU3 951 aa13.67□□□□□ -0.22
BRCC3P1-201ENST00000508559 PDZRN3Q9UPQ7 1066 aa13.67□□□□□ -0.22
BRCC3P1-201ENST00000508559 CASZ1Q86V15 1759 aa13.66□□□□□ -0.22
BRCC3P1-201ENST00000508559 POLA2Q14181 598 aa13.66□□□□□ -0.22
BRCC3P1-201ENST00000508559 CENPQQ7L2Z9 268 aaPredicted RBP13.66□□□□□ -0.22
BRCC3P1-201ENST00000508559 ANKRD18AQ8IVF6 992 aa13.66□□□□□ -0.22
BRCC3P1-201ENST00000508559 ZNF622Q969S3 477 aaKnown RBP eCLIP13.66□□□□□ -0.22
BRCC3P1-201ENST00000508559 GCC1Q96CN9 775 aa13.66□□□□□ -0.22
BRCC3P1-201ENST00000508559 PA2G4Q9UQ80 394 aaKnown RBP13.66□□□□□ -0.22
BRCC3P1-201ENST00000508559 RIC1Q4ADV7 1423 aa13.65□□□□□ -0.22
BRCC3P1-201ENST00000508559 IGHDP01880 384 aa13.65□□□□□ -0.22
BRCC3P1-201ENST00000508559 NPR1P16066 1061 aa13.65□□□□□ -0.22
BRCC3P1-201ENST00000508559 LDHAL6AQ6ZMR3 332 aa13.65□□□□□ -0.22
BRCC3P1-201ENST00000508559 ERC1Q8IUD2 1116 aa13.65□□□□□ -0.22
BRCC3P1-201ENST00000508559 KLHDC4Q8TBB5 520 aa13.65□□□□□ -0.22
BRCC3P1-201ENST00000508559 ZNF594Q96JF6 807 aaPredicted RBP13.65□□□□□ -0.22
BRCC3P1-201ENST00000508559 TMX4Q9H1E5 349 aaPredicted RBP13.65□□□□□ -0.22
BRCC3P1-201ENST00000508559 SEC31BQ9NQW1 1179 aa13.65□□□□□ -0.22
BRCC3P1-201ENST00000508559 EXOC6BQ9Y2D4 811 aa13.65□□□□□ -0.22
BRCC3P1-201ENST00000508559 RTL9Q8NET4 1388 aa13.64□□□□□ -0.23
BRCC3P1-201ENST00000508559 RAB11FIP3O75154 756 aa13.64□□□□□ -0.23
BRCC3P1-201ENST00000508559 ALDH1B1P30837 517 aa13.64□□□□□ -0.23
BRCC3P1-201ENST00000508559 MASTLQ96GX5 879 aa13.64□□□□□ -0.23
BRCC3P1-201ENST00000508559 MYH3P11055 1940 aa13.63□□□□□ -0.23
BRCC3P1-201ENST00000508559 RPS8P62241 208 aaKnown RBP13.63□□□□□ -0.23
BRCC3P1-201ENST00000508559 PTPN12Q05209 780 aaKnown RBP13.63□□□□□ -0.23
BRCC3P1-201ENST00000508559 GRAPQ13588 217 aa13.63□□□□□ -0.23
BRCC3P1-201ENST00000508559 ANKRD45Q5TZF3 282 aa13.63□□□□□ -0.23
BRCC3P1-201ENST00000508559 GRAPLQ8TC17 118 aaPredicted RBP13.63□□□□□ -0.23
BRCC3P1-201ENST00000508559 DCTPP1Q9H773 170 aa13.63□□□□□ -0.23
BRCC3P1-201ENST00000508559 COPRSQ9NQ92 184 aa13.63□□□□□ -0.23
BRCC3P1-201ENST00000508559 DDX60Q8IY21 1712 aaKnown RBP13.63□□□□□ -0.23
BRCC3P1-201ENST00000508559 LAMB2P55268 1798 aa13.63□□□□□ -0.23
BRCC3P1-201ENST00000508559 KLRG2A4D1S0 409 aaPredicted RBP13.62□□□□□ -0.23
BRCC3P1-201ENST00000508559 EYA2O00167 538 aa13.62□□□□□ -0.23
BRCC3P1-201ENST00000508559 CHRNA5P30532 468 aa13.62□□□□□ -0.23
BRCC3P1-201ENST00000508559 IL15P40933 162 aaPredicted RBP13.62□□□□□ -0.23
BRCC3P1-201ENST00000508559 PTGER2P43116 358 aa13.62□□□□□ -0.23
BRCC3P1-201ENST00000508559 RFX5P48382 616 aaPredicted RBP13.62□□□□□ -0.23
BRCC3P1-201ENST00000508559 CRY2Q49AN0 593 aa13.62□□□□□ -0.23
BRCC3P1-201ENST00000508559 METTL24Q5JXM2 366 aa13.62□□□□□ -0.23
BRCC3P1-201ENST00000508559 CNKSR1Q969H4 720 aa13.62□□□□□ -0.23
BRCC3P1-201ENST00000508559 CRAMP1Q96RY5 1269 aa13.62□□□□□ -0.23
BRCC3P1-201ENST00000508559 LRRCC1Q9C099 1032 aa13.62□□□□□ -0.23
BRCC3P1-201ENST00000508559 CEP126Q9P2H0 1117 aa13.62□□□□□ -0.23
BRCC3P1-201ENST00000508559 C10orf71Q711Q0 1435 aa13.62□□□□□ -0.23
BRCC3P1-201ENST00000508559 BBOX1O75936 387 aa13.61□□□□□ -0.23
BRCC3P1-201ENST00000508559 SRGNP10124 158 aa13.61□□□□□ -0.23
BRCC3P1-201ENST00000508559 HOXA10P31260 410 aaPredicted RBP13.61□□□□□ -0.23
BRCC3P1-201ENST00000508559 TGFB2P61812 414 aa13.61□□□□□ -0.23
BRCC3P1-201ENST00000508559 STYK1Q6J9G0 422 aa13.61□□□□□ -0.23
BRCC3P1-201ENST00000508559 CELF1Q92879 486 aaKnown RBP13.61□□□□□ -0.23
BRCC3P1-201ENST00000508559 KIF1BPQ96EK5 621 aa13.61□□□□□ -0.23
BRCC3P1-201ENST00000508559 FBXO3Q9UK99 471 aa13.61□□□□□ -0.23
BRCC3P1-201ENST00000508559 NOP58Q9Y2X3 529 aaKnown RBP13.61□□□□□ -0.23
BRCC3P1-201ENST00000508559 CD2APQ9Y5K6 639 aa13.61□□□□□ -0.23
BRCC3P1-201ENST00000508559 NRXN2Q9P2S2 1712 aa13.61□□□□□ -0.23
BRCC3P1-201ENST00000508559 A0A0G2JLW4 131 aa13.6□□□□□ -0.23
BRCC3P1-201ENST00000508559 CIAO1O76071 339 aa13.6□□□□□ -0.23
BRCC3P1-201ENST00000508559 LRRC24Q50LG9 513 aa13.6□□□□□ -0.23
BRCC3P1-201ENST00000508559 TMC4Q7Z404 712 aa13.6□□□□□ -0.23
BRCC3P1-201ENST00000508559 SMC5Q8IY18 1101 aa13.6□□□□□ -0.23
BRCC3P1-201ENST00000508559 CNKSR2Q8WXI2 1034 aa13.6□□□□□ -0.23
BRCC3P1-201ENST00000508559 SGIP1Q9BQI5 828 aa13.6□□□□□ -0.23
BRCC3P1-201ENST00000508559 PUS3Q9BZE2 481 aaKnown RBP13.6□□□□□ -0.23
BRCC3P1-201ENST00000508559 BSDC1Q9NW68 430 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms