RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 TPSG1Q9NRR2 321 aa8.15□□□□□ -1.1
PDLIM5-211ENST00000508531 ZMIZ1Q9ULJ6 1067 aa8.15□□□□□ -1.1
PDLIM5-211ENST00000508531 ZBTB42B2RXF5 422 aa8.14□□□□□ -1.11
PDLIM5-211ENST00000508531 OPLAHO14841 1288 aa8.14□□□□□ -1.11
PDLIM5-211ENST00000508531 MAP3K6O95382 1288 aa8.14□□□□□ -1.11
PDLIM5-211ENST00000508531 RSPO4Q2I0M5 234 aaPredicted RBP8.14□□□□□ -1.11
PDLIM5-211ENST00000508531 TREML1Q86YW5 311 aa8.14□□□□□ -1.11
PDLIM5-211ENST00000508531 DMRTC2Q8IXT2 367 aaPredicted RBP8.14□□□□□ -1.11
PDLIM5-211ENST00000508531 ACIN1Q9UKV3 1341 aaKnown RBP8.13□□□□□ -1.11
PDLIM5-211ENST00000508531 SELPP16109 830 aa8.13□□□□□ -1.11
PDLIM5-211ENST00000508531 RAC1P63000 192 aa8.13□□□□□ -1.11
PDLIM5-211ENST00000508531 SWI5Q1ZZU3 235 aa8.13□□□□□ -1.11
PDLIM5-211ENST00000508531 COX20Q5RI15 118 aa8.13□□□□□ -1.11
PDLIM5-211ENST00000508531 SHISA2Q6UWI4 295 aa8.13□□□□□ -1.11
PDLIM5-211ENST00000508531 RGL4Q8IZJ4 473 aa8.13□□□□□ -1.11
PDLIM5-211ENST00000508531 STK32AQ8WU08 396 aa8.13□□□□□ -1.11
PDLIM5-211ENST00000508531 LPIN3Q9BQK8 851 aa8.13□□□□□ -1.11
PDLIM5-211ENST00000508531 RTCBQ9Y3I0 505 aaKnown RBP8.13□□□□□ -1.11
PDLIM5-211ENST00000508531 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.12□□□□□ -1.11
PDLIM5-211ENST00000508531 C9orf172C9J069 976 aa8.12□□□□□ -1.11
PDLIM5-211ENST00000508531 ELNP15502 786 aa8.12□□□□□ -1.11
PDLIM5-211ENST00000508531 PLAURQ03405 335 aa8.12□□□□□ -1.11
PDLIM5-211ENST00000508531 PCSK7Q16549 785 aa8.12□□□□□ -1.11
PDLIM5-211ENST00000508531 PERM1Q5SV97 790 aa8.12□□□□□ -1.11
PDLIM5-211ENST00000508531 CMTR1Q8N1G2 835 aaKnown RBP8.12□□□□□ -1.11
PDLIM5-211ENST00000508531 TRPM4Q8TD43 1214 aa8.12□□□□□ -1.11
PDLIM5-211ENST00000508531 ELOAQ14241 798 aaKnown RBP8.11□□□□□ -1.11
PDLIM5-211ENST00000508531 OCLNQ16625 522 aa8.11□□□□□ -1.11
PDLIM5-211ENST00000508531 NKAPLQ5M9Q1 402 aa8.11□□□□□ -1.11
PDLIM5-211ENST00000508531 ELMSAN1Q6PJG2 1045 aa8.11□□□□□ -1.11
PDLIM5-211ENST00000508531 HFE2Q6ZVN8 426 aa8.11□□□□□ -1.11
PDLIM5-211ENST00000508531 FMR1NBQ8N0W7 255 aaPredicted RBP8.11□□□□□ -1.11
PDLIM5-211ENST00000508531 Q8N3U1 123 aa8.11□□□□□ -1.11
PDLIM5-211ENST00000508531 C11orf16Q9NQ32 467 aa8.11□□□□□ -1.11
PDLIM5-211ENST00000508531 XYLBO75191 536 aa8.1□□□□□ -1.11
PDLIM5-211ENST00000508531 GPLD1P80108 840 aa8.1□□□□□ -1.11
PDLIM5-211ENST00000508531 FAM69CQ0P6D2 419 aa8.1□□□□□ -1.11
PDLIM5-211ENST00000508531 ADGRE1Q14246 886 aa8.1□□□□□ -1.11
PDLIM5-211ENST00000508531 MBTPS1Q14703 1052 aa8.1□□□□□ -1.11
PDLIM5-211ENST00000508531 GRIK5Q16478 980 aa8.1□□□□□ -1.11
PDLIM5-211ENST00000508531 MSL1Q68DK7 614 aa8.1□□□□□ -1.11
PDLIM5-211ENST00000508531 MKNK1Q9BUB5 465 aa8.1□□□□□ -1.11
PDLIM5-211ENST00000508531 SAP130Q9H0E3 1048 aa8.1□□□□□ -1.11
PDLIM5-211ENST00000508531 FRRS1LQ9P0K9 344 aa8.1□□□□□ -1.11
PDLIM5-211ENST00000508531 SRPK2P78362 688 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-211ENST00000508531 ILDR2Q71H61 639 aa8.09□□□□□ -1.11
PDLIM5-211ENST00000508531 SMG9Q9H0W8 520 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-211ENST00000508531 DYRK3O43781 588 aa8.08□□□□□ -1.12
PDLIM5-211ENST00000508531 EGFRP00533 1210 aa8.08□□□□□ -1.12
PDLIM5-211ENST00000508531 NRLP54845 237 aa8.08□□□□□ -1.12
PDLIM5-211ENST00000508531 C16orf46Q6P387 395 aa8.08□□□□□ -1.12
PDLIM5-211ENST00000508531 CAPN12Q6ZSI9 719 aa8.08□□□□□ -1.12
PDLIM5-211ENST00000508531 ETFBKMTQ8IXQ9 262 aa8.08□□□□□ -1.12
PDLIM5-211ENST00000508531 LENG1Q96BZ8 264 aaPredicted RBP8.08□□□□□ -1.12
PDLIM5-211ENST00000508531 TLR7Q9NYK1 1049 aaKnown RBP8.08□□□□□ -1.12
PDLIM5-211ENST00000508531 USP21Q9UK80 565 aa8.08□□□□□ -1.12
PDLIM5-211ENST00000508531 KCNMB2Q9Y691 235 aa8.08□□□□□ -1.12
PDLIM5-211ENST00000508531 EIF2AK2P19525 551 aaKnown RBP8.07□□□□□ -1.12
PDLIM5-211ENST00000508531 ARID4AP29374 1257 aaPredicted RBP8.07□□□□□ -1.12
PDLIM5-211ENST00000508531 FAM26DQ5JW98 314 aa8.07□□□□□ -1.12
PDLIM5-211ENST00000508531 TMEM164Q5U3C3 297 aa8.07□□□□□ -1.12
PDLIM5-211ENST00000508531 TXNRD3Q86VQ6 643 aa8.07□□□□□ -1.12
PDLIM5-211ENST00000508531 WFDC8Q8IUA0 241 aa8.07□□□□□ -1.12
PDLIM5-211ENST00000508531 CXXC1Q9P0U4 656 aaPredicted RBP8.07□□□□□ -1.12
PDLIM5-211ENST00000508531 J3QW42 95 aa8.06□□□□□ -1.12
PDLIM5-211ENST00000508531 MMP20O60882 483 aa8.06□□□□□ -1.12
PDLIM5-211ENST00000508531 ATG7O95352 703 aa8.06□□□□□ -1.12
PDLIM5-211ENST00000508531 BRD2P25440 801 aaKnown RBP8.06□□□□□ -1.12
PDLIM5-211ENST00000508531 NRG1Q02297 640 aaPredicted RBP8.06□□□□□ -1.12
PDLIM5-211ENST00000508531 NAA30Q147X3 362 aaPredicted RBP8.06□□□□□ -1.12
PDLIM5-211ENST00000508531 ZMYM1Q5SVZ6 1142 aa8.06□□□□□ -1.12
PDLIM5-211ENST00000508531 TTC9Q92623 222 aa8.06□□□□□ -1.12
PDLIM5-211ENST00000508531 PSAPP07602 524 aa8.05□□□□□ -1.12
PDLIM5-211ENST00000508531 FBXO11Q86XK2 927 aa8.05□□□□□ -1.12
PDLIM5-211ENST00000508531 COL26A1Q96A83 441 aa8.05□□□□□ -1.12
PDLIM5-211ENST00000508531 NSUN5Q96P11 429 aaKnown RBP8.05□□□□□ -1.12
PDLIM5-211ENST00000508531 ZMYND15Q9H091 742 aa8.05□□□□□ -1.12
PDLIM5-211ENST00000508531 LOC102724428A0A0B4J2F2 783 aa8.04□□□□□ -1.12
PDLIM5-211ENST00000508531 TNFRSF10BO14763 440 aa8.04□□□□□ -1.12
PDLIM5-211ENST00000508531 SIK1P57059 783 aa8.04□□□□□ -1.12
PDLIM5-211ENST00000508531 TRIP4Q15650 581 aaPredicted RBP8.04□□□□□ -1.12
PDLIM5-211ENST00000508531 DTWD1Q8N5C7 304 aa8.04□□□□□ -1.12
PDLIM5-211ENST00000508531 PLD4Q96BZ4 506 aa8.04□□□□□ -1.12
PDLIM5-211ENST00000508531 TP53INP1Q96A56 240 aa8.03□□□□□ -1.12
PDLIM5-211ENST00000508531 PTCD1O75127 700 aaKnown RBP8.02□□□□□ -1.13
PDLIM5-211ENST00000508531 GHRHP01286 108 aa8.02□□□□□ -1.13
PDLIM5-211ENST00000508531 FOXD4L6Q3SYB3 417 aaPredicted RBP8.02□□□□□ -1.13
PDLIM5-211ENST00000508531 PRSS36Q5K4E3 855 aa8.02□□□□□ -1.13
PDLIM5-211ENST00000508531 GDF6Q6KF10 455 aaPredicted RBP8.02□□□□□ -1.13
PDLIM5-211ENST00000508531 FOXD4L3Q6VB84 417 aaPredicted RBP8.02□□□□□ -1.13
PDLIM5-211ENST00000508531 NLRP13Q86W25 1043 aa8.02□□□□□ -1.13
PDLIM5-211ENST00000508531 UBAP1LF5GYI3 381 aa8.01□□□□□ -1.13
PDLIM5-211ENST00000508531 DEAF1O75398 565 aaPredicted RBP8.01□□□□□ -1.13
PDLIM5-211ENST00000508531 SOX18P35713 384 aa8.01□□□□□ -1.13
PDLIM5-211ENST00000508531 PIK3R5Q8WYR1 880 aa8.01□□□□□ -1.13
PDLIM5-211ENST00000508531 CLP1Q92989 425 aaKnown RBP8.01□□□□□ -1.13
PDLIM5-211ENST00000508531 PBXIP1Q96AQ6 731 aa8.01□□□□□ -1.13
PDLIM5-211ENST00000508531 CCDC97Q96F63 343 aaPredicted RBP8.01□□□□□ -1.13
PDLIM5-211ENST00000508531 SLAIN2Q9P270 581 aa8.01□□□□□ -1.13
PDLIM5-211ENST00000508531 H2AFB1P0C5Y9 115 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms