RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 SUPT16HQ9Y5B9 1047 aaKnown RBP12.85□□□□□ -0.35
HTT-204ENST00000508321 SPEF2Q9C093 1822 aa12.85□□□□□ -0.35
HTT-204ENST00000508321 GNAI2P04899 355 aa12.84□□□□□ -0.35
HTT-204ENST00000508321 RTL5Q5HYW3 569 aaPredicted RBP12.84□□□□□ -0.35
HTT-204ENST00000508321 CNKSR1Q969H4 720 aa12.84□□□□□ -0.35
HTT-204ENST00000508321 RBM17Q96I25 401 aaKnown RBP12.84□□□□□ -0.35
HTT-204ENST00000508321 SUCLG2Q96I99 432 aa12.84□□□□□ -0.35
HTT-204ENST00000508321 CRAMP1Q96RY5 1269 aa12.84□□□□□ -0.35
HTT-204ENST00000508321 COG6Q9Y2V7 657 aa12.84□□□□□ -0.35
HTT-204ENST00000508321 ZBTB7BO15156 539 aaPredicted RBP12.83□□□□□ -0.36
HTT-204ENST00000508321 CSF1RP07333 972 aa12.83□□□□□ -0.36
HTT-204ENST00000508321 ALDH1B1P30837 517 aa12.83□□□□□ -0.36
HTT-204ENST00000508321 MTX1Q13505 466 aa12.83□□□□□ -0.36
HTT-204ENST00000508321 C20orf194Q5TEA3 1177 aa12.83□□□□□ -0.36
HTT-204ENST00000508321 DDX46Q7L014 1031 aaKnown RBP12.83□□□□□ -0.36
HTT-204ENST00000508321 SYNE4Q8N205 404 aa12.83□□□□□ -0.36
HTT-204ENST00000508321 TTLL11Q8NHH1 800 aa12.83□□□□□ -0.36
HTT-204ENST00000508321 CDC5LQ99459 802 aaKnown RBP12.83□□□□□ -0.36
HTT-204ENST00000508321 SYT17Q9BSW7 474 aa12.83□□□□□ -0.36
HTT-204ENST00000508321 A0A1B0GUL6 1792 aa12.83□□□□□ -0.36
HTT-204ENST00000508321 DPEP1P16444 411 aa12.82□□□□□ -0.36
HTT-204ENST00000508321 FOXO4P98177 505 aa12.82□□□□□ -0.36
HTT-204ENST00000508321 GRAPQ13588 217 aa12.82□□□□□ -0.36
HTT-204ENST00000508321 SOGA3Q5TF21 947 aa12.82□□□□□ -0.36
HTT-204ENST00000508321 C3orf67Q6ZVT6 689 aa12.82□□□□□ -0.36
HTT-204ENST00000508321 CCDC24Q8N4L8 307 aa12.82□□□□□ -0.36
HTT-204ENST00000508321 ANKRD44Q8N8A2 993 aa12.82□□□□□ -0.36
HTT-204ENST00000508321 GRAPLQ8TC17 118 aaPredicted RBP12.82□□□□□ -0.36
HTT-204ENST00000508321 BICC1Q9H694 974 aaKnown RBP12.82□□□□□ -0.36
HTT-204ENST00000508321 PIM2Q9P1W9 311 aa12.82□□□□□ -0.36
HTT-204ENST00000508321 LRRFIP2Q9Y608 721 aaKnown RBP12.82□□□□□ -0.36
HTT-204ENST00000508321 SLX4Q8IY92 1834 aa12.82□□□□□ -0.36
HTT-204ENST00000508321 CHRNA5P30532 468 aa12.81□□□□□ -0.36
HTT-204ENST00000508321 IFIT5Q13325 482 aaKnown RBP12.81□□□□□ -0.36
HTT-204ENST00000508321 FAM161AQ3B820 660 aa12.81□□□□□ -0.36
HTT-204ENST00000508321 GRIPAP1Q4V328 841 aa12.81□□□□□ -0.36
HTT-204ENST00000508321 TTLL6Q8N841 843 aa12.81□□□□□ -0.36
HTT-204ENST00000508321 NLGN2Q8NFZ4 835 aa12.81□□□□□ -0.36
HTT-204ENST00000508321 KAZALD1Q96I82 304 aa12.81□□□□□ -0.36
HTT-204ENST00000508321 ZBTB40Q9NUA8 1239 aa12.81□□□□□ -0.36
HTT-204ENST00000508321 TAF1P21675 1872 aa12.8□□□□□ -0.36
HTT-204ENST00000508321 LTBP1Q14766 1721 aa12.8□□□□□ -0.36
HTT-204ENST00000508321 ANKRD18BA2A2Z9 1011 aa12.8□□□□□ -0.36
HTT-204ENST00000508321 CCDC57Q2TAC2 916 aa12.8□□□□□ -0.36
HTT-204ENST00000508321 DALRD3Q5D0E6 543 aaKnown RBP12.8□□□□□ -0.36
HTT-204ENST00000508321 LMBR1LQ6UX01 489 aa12.8□□□□□ -0.36
HTT-204ENST00000508321 JARID2Q92833 1246 aaPredicted RBP12.8□□□□□ -0.36
HTT-204ENST00000508321 ZNF622Q969S3 477 aaKnown RBP eCLIP12.8□□□□□ -0.36
HTT-204ENST00000508321 GREM2Q9H772 168 aa12.8□□□□□ -0.36
HTT-204ENST00000508321 FER1L6Q2WGJ9 1857 aa12.8□□□□□ -0.36
HTT-204ENST00000508321 A0A0G2JLW4 131 aa12.79□□□□□ -0.36
HTT-204ENST00000508321 BBOX1O75936 387 aa12.79□□□□□ -0.36
HTT-204ENST00000508321 KCNA3P22001 575 aa12.79□□□□□ -0.36
HTT-204ENST00000508321 ITGA6P23229 1130 aa12.79□□□□□ -0.36
HTT-204ENST00000508321 IGHMBP2P38935 993 aaKnown RBP12.79□□□□□ -0.36
HTT-204ENST00000508321 EPHA10Q5JZY3 1008 aa12.79□□□□□ -0.36
HTT-204ENST00000508321 CC2D2BQ6DHV5 1058 aa12.79□□□□□ -0.36
HTT-204ENST00000508321 PRPF40BQ6NWY9 871 aaKnown RBP12.79□□□□□ -0.36
HTT-204ENST00000508321 ANKRD18AQ8IVF6 992 aa12.79□□□□□ -0.36
HTT-204ENST00000508321 TMX4Q9H1E5 349 aaPredicted RBP12.79□□□□□ -0.36
HTT-204ENST00000508321 FBXO3Q9UK99 471 aa12.79□□□□□ -0.36
HTT-204ENST00000508321 CHMP3Q9Y3E7 222 aa12.79□□□□□ -0.36
HTT-204ENST00000508321 PPEF1O14829 653 aaPredicted RBP12.78□□□□□ -0.36
HTT-204ENST00000508321 HMMRO75330 724 aa12.78□□□□□ -0.36
HTT-204ENST00000508321 NEFLP07196 543 aa12.78□□□□□ -0.36
HTT-204ENST00000508321 TAF7LQ5H9L4 462 aa12.78□□□□□ -0.36
HTT-204ENST00000508321 RPAP2Q8IXW5 612 aaPredicted RBP12.78□□□□□ -0.36
HTT-204ENST00000508321 CRBNQ96SW2 442 aa12.78□□□□□ -0.36
HTT-204ENST00000508321 COL4A1P02462 1669 aa12.77□□□□□ -0.36
HTT-204ENST00000508321 SRGAP3O43295 1099 aa12.77□□□□□ -0.37
HTT-204ENST00000508321 RPS8P62241 208 aaKnown RBP12.77□□□□□ -0.37
HTT-204ENST00000508321 CEP85Q6P2H3 762 aa12.77□□□□□ -0.37
HTT-204ENST00000508321 MPHOSPH8Q99549 860 aa12.77□□□□□ -0.37
HTT-204ENST00000508321 BSDC1Q9NW68 430 aaPredicted RBP12.77□□□□□ -0.37
HTT-204ENST00000508321 DCAF8L1A6NGE4 600 aa12.76□□□□□ -0.37
HTT-204ENST00000508321 CCDC93Q567U6 631 aa12.76□□□□□ -0.37
HTT-204ENST00000508321 SSH3Q8TE77 659 aa12.76□□□□□ -0.37
HTT-204ENST00000508321 CELF1Q92879 486 aaKnown RBP12.76□□□□□ -0.37
HTT-204ENST00000508321 CCDC85AQ96PX6 553 aaPredicted RBP12.76□□□□□ -0.37
HTT-204ENST00000508321 COPRSQ9NQ92 184 aa12.76□□□□□ -0.37
HTT-204ENST00000508321 ATP6V0A2Q9Y487 856 aa12.76□□□□□ -0.37
HTT-204ENST00000508321 SNED1Q8TER0 1413 aa12.76□□□□□ -0.37
HTT-204ENST00000508321 ARAP2Q8WZ64 1704 aa12.76□□□□□ -0.37
HTT-204ENST00000508321 CIAO1O76071 339 aa12.75□□□□□ -0.37
HTT-204ENST00000508321 RFX5P48382 616 aaPredicted RBP12.75□□□□□ -0.37
HTT-204ENST00000508321 ATP8B2P98198 1209 aa12.75□□□□□ -0.37
HTT-204ENST00000508321 POLA2Q14181 598 aa12.75□□□□□ -0.37
HTT-204ENST00000508321 SP8Q8IXZ3 490 aa12.75□□□□□ -0.37
HTT-204ENST00000508321 C1orf115Q9H7X2 142 aa12.75□□□□□ -0.37
HTT-204ENST00000508321 SEC31BQ9NQW1 1179 aa12.75□□□□□ -0.37
HTT-204ENST00000508321 BCS1LQ9Y276 419 aa12.75□□□□□ -0.37
HTT-204ENST00000508321 CHD4Q14839 1912 aa12.74□□□□□ -0.37
HTT-204ENST00000508321 DUOX1Q9NRD9 1551 aa12.74□□□□□ -0.37
HTT-204ENST00000508321 MROH5Q6ZUA9 1318 aa12.74□□□□□ -0.37
HTT-204ENST00000508321 LTBP3Q9NS15 1303 aa12.74□□□□□ -0.37
HTT-204ENST00000508321 RTKN2Q8IZC4 609 aa12.74□□□□□ -0.37
HTT-204ENST00000508321 C7orf43Q8WVR3 580 aa12.74□□□□□ -0.37
HTT-204ENST00000508321 DICER1Q9UPY3 1922 aaKnown RBP12.74□□□□□ -0.37
HTT-204ENST00000508321 XDHP47989 1333 aa12.73□□□□□ -0.37
HTT-204ENST00000508321 PNMA6EA0A0J9YXQ4 647 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms