RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 GPLD1P80108 840 aa9.96□□□□□ -0.82
TRAPPC13-209ENST00000508304 IFT43Q96FT9 208 aa9.96□□□□□ -0.82
TRAPPC13-209ENST00000508304 TARSP26639 723 aaKnown RBP9.95□□□□□ -0.82
TRAPPC13-209ENST00000508304 NOS3P29474 1203 aa9.95□□□□□ -0.82
TRAPPC13-209ENST00000508304 ARSDP51689 593 aa9.95□□□□□ -0.82
TRAPPC13-209ENST00000508304 ELMSAN1Q6PJG2 1045 aa9.95□□□□□ -0.82
TRAPPC13-209ENST00000508304 KRT25Q7Z3Z0 450 aa9.95□□□□□ -0.82
TRAPPC13-209ENST00000508304 WFDC8Q8IUA0 241 aa9.95□□□□□ -0.82
TRAPPC13-209ENST00000508304 QTRT2Q9H974 415 aaKnown RBP9.95□□□□□ -0.82
TRAPPC13-209ENST00000508304 FAM196BA6NMK8 535 aa9.94□□□□□ -0.82
TRAPPC13-209ENST00000508304 IREB2P48200 963 aaKnown RBP9.94□□□□□ -0.82
TRAPPC13-209ENST00000508304 DGKZQ13574 1117 aa9.94□□□□□ -0.82
TRAPPC13-209ENST00000508304 ANKMY2Q8IV38 441 aa9.94□□□□□ -0.82
TRAPPC13-209ENST00000508304 KRTAP4-12Q9BQ66 201 aa9.94□□□□□ -0.82
TRAPPC13-209ENST00000508304 USP17L15C9J2P7 530 aa9.93□□□□□ -0.82
TRAPPC13-209ENST00000508304 USP17L10C9JJH3 530 aa9.93□□□□□ -0.82
TRAPPC13-209ENST00000508304 USP17L13C9JLJ4 530 aa9.93□□□□□ -0.82
TRAPPC13-209ENST00000508304 USP17L12C9JPN9 530 aa9.93□□□□□ -0.82
TRAPPC13-209ENST00000508304 USP17L11C9JVI0 530 aa9.93□□□□□ -0.82
TRAPPC13-209ENST00000508304 USP17L21D6R901 530 aa9.93□□□□□ -0.82
TRAPPC13-209ENST00000508304 USP17L18D6R9N7 530 aa9.93□□□□□ -0.82
TRAPPC13-209ENST00000508304 USP17L22D6RA61 530 aa9.93□□□□□ -0.82
TRAPPC13-209ENST00000508304 USP17L17D6RBQ6 530 aa9.93□□□□□ -0.82
TRAPPC13-209ENST00000508304 USP17L19D6RCP7 530 aa9.93□□□□□ -0.82
TRAPPC13-209ENST00000508304 USP17L20D6RJB6 530 aa9.93□□□□□ -0.82
TRAPPC13-209ENST00000508304 RARAP10276 462 aa9.93□□□□□ -0.82
TRAPPC13-209ENST00000508304 MLLT1Q03111 559 aaPredicted RBP9.93□□□□□ -0.82
TRAPPC13-209ENST00000508304 USP17L24Q0WX57 530 aa9.93□□□□□ -0.82
TRAPPC13-209ENST00000508304 IGF2-ASQ6U949 168 aa9.93□□□□□ -0.82
TRAPPC13-209ENST00000508304 PROSER2Q86WR7 435 aaPredicted RBP9.93□□□□□ -0.82
TRAPPC13-209ENST00000508304 KRTAP1-3Q8IUG1 177 aa9.93□□□□□ -0.82
TRAPPC13-209ENST00000508304 CLUAP1Q96AJ1 413 aa9.93□□□□□ -0.82
TRAPPC13-209ENST00000508304 PPP1R12CQ9BZL4 782 aa9.93□□□□□ -0.82
TRAPPC13-209ENST00000508304 DEAF1O75398 565 aaPredicted RBP9.92□□□□□ -0.82
TRAPPC13-209ENST00000508304 SASH3O75995 380 aa9.92□□□□□ -0.82
TRAPPC13-209ENST00000508304 MICAL2O94851 1124 aa9.92□□□□□ -0.82
TRAPPC13-209ENST00000508304 MYO19Q96H55 970 aa9.92□□□□□ -0.82
TRAPPC13-209ENST00000508304 PRKCSHP14314 528 aaPredicted RBP9.91□□□□□ -0.82
TRAPPC13-209ENST00000508304 WEE1P30291 646 aa9.91□□□□□ -0.82
TRAPPC13-209ENST00000508304 MEGF10Q96KG7 1140 aa9.91□□□□□ -0.82
TRAPPC13-209ENST00000508304 ARXQ96QS3 562 aa9.91□□□□□ -0.82
TRAPPC13-209ENST00000508304 RNF112Q9ULX5 631 aa9.91□□□□□ -0.82
TRAPPC13-209ENST00000508304 FOXO3O43524 673 aa9.9□□□□□ -0.82
TRAPPC13-209ENST00000508304 NRLP54845 237 aa9.9□□□□□ -0.82
TRAPPC13-209ENST00000508304 C11orf91Q3C1V1 193 aa9.9□□□□□ -0.82
TRAPPC13-209ENST00000508304 SMG9Q9H0W8 520 aaKnown RBP9.9□□□□□ -0.82
TRAPPC13-209ENST00000508304 DLL1O00548 723 aa9.89□□□□□ -0.83
TRAPPC13-209ENST00000508304 OPLAHO14841 1288 aa9.89□□□□□ -0.83
TRAPPC13-209ENST00000508304 EGFRP00533 1210 aa9.89□□□□□ -0.83
TRAPPC13-209ENST00000508304 ARID4AP29374 1257 aaPredicted RBP9.88□□□□□ -0.83
TRAPPC13-209ENST00000508304 PRR23CQ6ZRP0 262 aa9.88□□□□□ -0.83
TRAPPC13-209ENST00000508304 HFE2Q6ZVN8 426 aa9.88□□□□□ -0.83
TRAPPC13-209ENST00000508304 VRTNQ9H8Y1 702 aa9.88□□□□□ -0.83
TRAPPC13-209ENST00000508304 TLR7Q9NYK1 1049 aaKnown RBP9.88□□□□□ -0.83
TRAPPC13-209ENST00000508304 DZIP1LQ8IYY4 767 aaKnown RBP9.87□□□□□ -0.83
TRAPPC13-209ENST00000508304 RTCBQ9Y3I0 505 aaKnown RBP9.87□□□□□ -0.83
TRAPPC13-209ENST00000508304 EIF2AK2P19525 551 aaKnown RBP9.86□□□□□ -0.83
TRAPPC13-209ENST00000508304 LCE3BQ5TA77 95 aa9.86□□□□□ -0.83
TRAPPC13-209ENST00000508304 CALR3Q96L12 384 aaKnown RBP9.86□□□□□ -0.83
TRAPPC13-209ENST00000508304 USP20Q9Y2K6 914 aa9.86□□□□□ -0.83
TRAPPC13-209ENST00000508304 LRFN2Q9ULH4 789 aa9.85□□□□□ -0.83
TRAPPC13-209ENST00000508304 XYLBO75191 536 aa9.84□□□□□ -0.83
TRAPPC13-209ENST00000508304 LMOD1P29536 600 aaPredicted RBP9.84□□□□□ -0.83
TRAPPC13-209ENST00000508304 TMEM130Q8N3G9 435 aa9.84□□□□□ -0.83
TRAPPC13-209ENST00000508304 VTI1AQ96AJ9 217 aa9.84□□□□□ -0.83
TRAPPC13-209ENST00000508304 PLD4Q96BZ4 506 aa9.84□□□□□ -0.83
TRAPPC13-209ENST00000508304 AKTIPQ9H8T0 292 aa9.84□□□□□ -0.83
TRAPPC13-209ENST00000508304 LOC102724428A0A0B4J2F2 783 aa9.83□□□□□ -0.84
TRAPPC13-209ENST00000508304 HOXD8P13378 290 aaPredicted RBP9.83□□□□□ -0.84
TRAPPC13-209ENST00000508304 SIK1P57059 783 aa9.83□□□□□ -0.84
TRAPPC13-209ENST00000508304 MRPL18Q9H0U6 180 aaKnown RBP9.83□□□□□ -0.84
TRAPPC13-209ENST00000508304 J3QW42 95 aa9.82□□□□□ -0.84
TRAPPC13-209ENST00000508304 SLC51AQ86UW1 340 aa9.82□□□□□ -0.84
TRAPPC13-209ENST00000508304 TREML1Q86YW5 311 aa9.82□□□□□ -0.84
TRAPPC13-209ENST00000508304 SRA1Q9HD15 236 aaKnown RBP9.82□□□□□ -0.84
TRAPPC13-209ENST00000508304 KCNMB2Q9Y691 235 aa9.82□□□□□ -0.84
TRAPPC13-209ENST00000508304 F8W735 103 aaPredicted RBP9.81□□□□□ -0.84
TRAPPC13-209ENST00000508304 MMP20O60882 483 aa9.81□□□□□ -0.84
TRAPPC13-209ENST00000508304 ALX3O95076 343 aa9.81□□□□□ -0.84
TRAPPC13-209ENST00000508304 PSAPP07602 524 aa9.81□□□□□ -0.84
TRAPPC13-209ENST00000508304 SOX18P35713 384 aa9.81□□□□□ -0.84
TRAPPC13-209ENST00000508304 RGL4Q8IZJ4 473 aa9.81□□□□□ -0.84
TRAPPC13-209ENST00000508304 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.81□□□□□ -0.84
TRAPPC13-209ENST00000508304 FSTP19883 344 aa9.8□□□□□ -0.84
TRAPPC13-209ENST00000508304 GDF6Q6KF10 455 aaPredicted RBP9.8□□□□□ -0.84
TRAPPC13-209ENST00000508304 Q6ZS46 218 aa9.8□□□□□ -0.84
TRAPPC13-209ENST00000508304 CMTR1Q8N1G2 835 aaKnown RBP9.8□□□□□ -0.84
TRAPPC13-209ENST00000508304 IL22RA1Q8N6P7 574 aa9.8□□□□□ -0.84
TRAPPC13-209ENST00000508304 SETDB1Q15047 1291 aa9.79□□□□□ -0.84
TRAPPC13-209ENST00000508304 COX20Q5RI15 118 aa9.79□□□□□ -0.84
TRAPPC13-209ENST00000508304 MAP4K3Q8IVH8 894 aa9.79□□□□□ -0.84
TRAPPC13-209ENST00000508304 NSUN5Q96P11 429 aaKnown RBP9.79□□□□□ -0.84
TRAPPC13-209ENST00000508304 A6NJR5 290 aa9.78□□□□□ -0.84
TRAPPC13-209ENST00000508304 GHRHP01286 108 aa9.78□□□□□ -0.84
TRAPPC13-209ENST00000508304 FAM200AQ8TCP9 573 aa9.78□□□□□ -0.84
TRAPPC13-209ENST00000508304 FKBP5Q13451 457 aaPredicted RBP9.77□□□□□ -0.85
TRAPPC13-209ENST00000508304 CFAP70Q5T0N1 1121 aa9.77□□□□□ -0.85
TRAPPC13-209ENST00000508304 KRTAP19-1Q8IUB9 90 aa9.77□□□□□ -0.85
TRAPPC13-209ENST00000508304 DCAF11Q8TEB1 546 aa9.77□□□□□ -0.85
TRAPPC13-209ENST00000508304 RBSNQ9H1K0 784 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms