RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 MTMR7Q9Y216 660 aa9.78□□□□□ -0.84
DHFR-204ENST00000508282 PHF20L1A8MW92 1017 aa9.77□□□□□ -0.85
DHFR-204ENST00000508282 RASSF7Q02833 373 aa9.77□□□□□ -0.85
DHFR-204ENST00000508282 FAM13BQ9NYF5 915 aa9.77□□□□□ -0.85
DHFR-204ENST00000508282 SLC6A14Q9UN76 642 aa9.77□□□□□ -0.85
DHFR-204ENST00000508282 ABL1P00519 1130 aa9.76□□□□□ -0.85
DHFR-204ENST00000508282 ALBP02768 609 aa9.76□□□□□ -0.85
DHFR-204ENST00000508282 NPR3P17342 541 aa9.76□□□□□ -0.85
DHFR-204ENST00000508282 PDE4CQ08493 712 aa9.76□□□□□ -0.85
DHFR-204ENST00000508282 KANK3Q6NY19 840 aa9.76□□□□□ -0.85
DHFR-204ENST00000508282 DHX32Q7L7V1 743 aaKnown RBP9.76□□□□□ -0.85
DHFR-204ENST00000508282 ANO2Q9NQ90 1003 aa9.76□□□□□ -0.85
DHFR-204ENST00000508282 ZBTB42B2RXF5 422 aa9.75□□□□□ -0.85
DHFR-204ENST00000508282 UBAP1LF5GYI3 381 aa9.75□□□□□ -0.85
DHFR-204ENST00000508282 ARID4AP29374 1257 aaPredicted RBP9.75□□□□□ -0.85
DHFR-204ENST00000508282 EIF1AXP47813 144 aaKnown RBP9.75□□□□□ -0.85
DHFR-204ENST00000508282 ZNF211Q13398 564 aaPredicted RBP9.75□□□□□ -0.85
DHFR-204ENST00000508282 NOM1Q5C9Z4 860 aaKnown RBP9.75□□□□□ -0.85
DHFR-204ENST00000508282 C20orf204Q6ZNR8 217 aa9.75□□□□□ -0.85
DHFR-204ENST00000508282 NAGPAQ9UK23 515 aa9.75□□□□□ -0.85
DHFR-204ENST00000508282 M0R082 166 aa9.74□□□□□ -0.85
DHFR-204ENST00000508282 SERPINB4P48594 390 aa9.74□□□□□ -0.85
DHFR-204ENST00000508282 NLRP13Q86W25 1043 aa9.74□□□□□ -0.85
DHFR-204ENST00000508282 MICALL1Q8N3F8 863 aa9.74□□□□□ -0.85
DHFR-204ENST00000508282 ZNF417Q8TAU3 575 aa9.74□□□□□ -0.85
DHFR-204ENST00000508282 TRPM4Q8TD43 1214 aa9.74□□□□□ -0.85
DHFR-204ENST00000508282 ZNF587Q96SQ5 575 aaPredicted RBP9.74□□□□□ -0.85
DHFR-204ENST00000508282 SUV39H2Q9H5I1 410 aa9.74□□□□□ -0.85
DHFR-204ENST00000508282 GNB5O14775 395 aa9.73□□□□□ -0.85
DHFR-204ENST00000508282 MMP20O60882 483 aa9.73□□□□□ -0.85
DHFR-204ENST00000508282 FKBP4Q02790 459 aaKnown RBP eCLIP9.73□□□□□ -0.85
DHFR-204ENST00000508282 SF3B2Q13435 895 aaKnown RBP9.73□□□□□ -0.85
DHFR-204ENST00000508282 C8orf86Q6ZUL3 223 aa9.73□□□□□ -0.85
DHFR-204ENST00000508282 EDEM1Q92611 657 aa9.73□□□□□ -0.85
DHFR-204ENST00000508282 NUDT16Q96DE0 195 aaKnown RBP9.73□□□□□ -0.85
DHFR-204ENST00000508282 TLR7Q9NYK1 1049 aaKnown RBP9.73□□□□□ -0.85
DHFR-204ENST00000508282 GDF11O95390 407 aa9.72□□□□□ -0.85
DHFR-204ENST00000508282 GPLD1P80108 840 aa9.72□□□□□ -0.85
DHFR-204ENST00000508282 MLLT1Q03111 559 aaPredicted RBP9.72□□□□□ -0.85
DHFR-204ENST00000508282 COL9A3Q14050 684 aaPredicted RBP9.72□□□□□ -0.85
DHFR-204ENST00000508282 TXNDC2Q86VQ3 553 aa9.72□□□□□ -0.85
DHFR-204ENST00000508282 TRIM11Q96F44 468 aa9.72□□□□□ -0.85
DHFR-204ENST00000508282 PRDM6Q9NQX0 595 aa9.72□□□□□ -0.85
DHFR-204ENST00000508282 FAM13AO94988 1023 aa9.71□□□□□ -0.86
DHFR-204ENST00000508282 PDGFAP04085 211 aa9.71□□□□□ -0.86
DHFR-204ENST00000508282 COL8A1P27658 744 aa9.71□□□□□ -0.86
DHFR-204ENST00000508282 DNM1Q05193 864 aaKnown RBP9.71□□□□□ -0.86
DHFR-204ENST00000508282 FAM35AQ86V20 835 aa9.71□□□□□ -0.86
DHFR-204ENST00000508282 TMEM151AQ8N4L1 468 aa9.71□□□□□ -0.86
DHFR-204ENST00000508282 EGFL7Q9UHF1 273 aa9.71□□□□□ -0.86
DHFR-204ENST00000508282 FNDC3AQ9Y2H6 1198 aaKnown RBP9.71□□□□□ -0.86
DHFR-204ENST00000508282 ICMTO60725 284 aa9.7□□□□□ -0.86
DHFR-204ENST00000508282 CPB1P15086 417 aa9.7□□□□□ -0.86
DHFR-204ENST00000508282 NRLP54845 237 aa9.7□□□□□ -0.86
DHFR-204ENST00000508282 PCSK7Q16549 785 aa9.7□□□□□ -0.86
DHFR-204ENST00000508282 ALKBH2Q6NS38 261 aa9.7□□□□□ -0.86
DHFR-204ENST00000508282 PIK3R2O00459 728 aa9.69□□□□□ -0.86
DHFR-204ENST00000508282 PSAPP07602 524 aa9.69□□□□□ -0.86
DHFR-204ENST00000508282 MZF1P28698 734 aaPredicted RBP9.69□□□□□ -0.86
DHFR-204ENST00000508282 PLAURQ03405 335 aa9.69□□□□□ -0.86
DHFR-204ENST00000508282 PSAPL1Q6NUJ1 521 aa9.69□□□□□ -0.86
DHFR-204ENST00000508282 HFE2Q6ZVN8 426 aa9.69□□□□□ -0.86
DHFR-204ENST00000508282 NUDT8Q8WV74 236 aa9.69□□□□□ -0.86
DHFR-204ENST00000508282 DCAF5Q96JK2 942 aa9.69□□□□□ -0.86
DHFR-204ENST00000508282 GGNBP2Q9H3C7 697 aa9.69□□□□□ -0.86
DHFR-204ENST00000508282 POLIQ9UNA4 740 aa9.69□□□□□ -0.86
DHFR-204ENST00000508282 FZD6O60353 706 aa9.68□□□□□ -0.86
DHFR-204ENST00000508282 HOXD8P13378 290 aaPredicted RBP9.68□□□□□ -0.86
DHFR-204ENST00000508282 NID1P14543 1247 aa9.68□□□□□ -0.86
DHFR-204ENST00000508282 SOX18P35713 384 aa9.68□□□□□ -0.86
DHFR-204ENST00000508282 ECM1Q16610 540 aa9.68□□□□□ -0.86
DHFR-204ENST00000508282 PERM1Q5SV97 790 aa9.68□□□□□ -0.86
DHFR-204ENST00000508282 NSUN5Q96P11 429 aaKnown RBP9.68□□□□□ -0.86
DHFR-204ENST00000508282 LPIN3Q9BQK8 851 aa9.68□□□□□ -0.86
DHFR-204ENST00000508282 PLVAPQ9BX97 442 aa9.68□□□□□ -0.86
DHFR-204ENST00000508282 JPH1Q9HDC5 661 aaPredicted RBP9.68□□□□□ -0.86
DHFR-204ENST00000508282 TMEM63CQ9P1W3 806 aa9.68□□□□□ -0.86
DHFR-204ENST00000508282 A6NHS1 94 aa9.67□□□□□ -0.86
DHFR-204ENST00000508282 H3BRB1 525 aa9.67□□□□□ -0.86
DHFR-204ENST00000508282 LILRB5O75023 590 aa9.67□□□□□ -0.86
DHFR-204ENST00000508282 AAMPQ13685 434 aa9.67□□□□□ -0.86
DHFR-204ENST00000508282 PDE12Q6L8Q7 609 aaKnown RBP9.67□□□□□ -0.86
DHFR-204ENST00000508282 OR13H1Q8NG92 308 aa9.67□□□□□ -0.86
DHFR-204ENST00000508282 TUT1Q9H6E5 874 aaKnown RBP9.67□□□□□ -0.86
DHFR-204ENST00000508282 ELP3Q9H9T3 547 aa9.67□□□□□ -0.86
DHFR-204ENST00000508282 J3QW42 95 aa9.66□□□□□ -0.86
DHFR-204ENST00000508282 BRD1O95696 1058 aa9.66□□□□□ -0.86
DHFR-204ENST00000508282 RPLP1P05386 114 aaKnown RBP9.66□□□□□ -0.86
DHFR-204ENST00000508282 TTC39BQ5VTQ0 682 aaPredicted RBP9.66□□□□□ -0.86
DHFR-204ENST00000508282 CCDC87Q9NVE4 849 aa9.66□□□□□ -0.86
DHFR-204ENST00000508282 ABI2Q9NYB9 513 aaPredicted RBP9.66□□□□□ -0.86
DHFR-204ENST00000508282 NOP53Q9NZM5 478 aaKnown RBP9.66□□□□□ -0.86
DHFR-204ENST00000508282 FRRS1LQ9P0K9 344 aa9.66□□□□□ -0.86
DHFR-204ENST00000508282 LOC102724428A0A0B4J2F2 783 aa9.65□□□□□ -0.86
DHFR-204ENST00000508282 RGS9O75916 674 aaPredicted RBP9.65□□□□□ -0.86
DHFR-204ENST00000508282 PCSK2P16519 638 aa9.65□□□□□ -0.86
DHFR-204ENST00000508282 AFF1P51825 1210 aaKnown RBP9.65□□□□□ -0.86
DHFR-204ENST00000508282 SIK1P57059 783 aa9.65□□□□□ -0.86
DHFR-204ENST00000508282 C8orf34Q49A92 452 aa9.65□□□□□ -0.86
DHFR-204ENST00000508282 COL13A1Q5TAT6 717 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 175.7 ms