RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 DDNO94850 711 aaPredicted RBP11.98□□□□□ -0.49
DDX41-209ENST00000508279 PCCAP05165 728 aaPredicted RBP11.98□□□□□ -0.49
DDX41-209ENST00000508279 IGKV5-2P06315 115 aa11.98□□□□□ -0.49
DDX41-209ENST00000508279 DNAAF4Q8WXU2 420 aa11.98□□□□□ -0.49
DDX41-209ENST00000508279 CDCA7LQ96GN5 454 aa11.98□□□□□ -0.49
DDX41-209ENST00000508279 ATP6V0A2Q9Y487 856 aa11.98□□□□□ -0.49
DDX41-209ENST00000508279 NEURL1BA8MQ27 555 aa11.97□□□□□ -0.49
DDX41-209ENST00000508279 F6X3S4 739 aa11.97□□□□□ -0.49
DDX41-209ENST00000508279 BBOX1O75936 387 aa11.97□□□□□ -0.49
DDX41-209ENST00000508279 HSP90B1P14625 803 aaKnown RBP11.97□□□□□ -0.49
DDX41-209ENST00000508279 SF3B3Q15393 1217 aaKnown RBP11.97□□□□□ -0.49
DDX41-209ENST00000508279 DPP8Q6V1X1 898 aaPredicted RBP11.97□□□□□ -0.49
DDX41-209ENST00000508279 LARGE2Q8N3Y3 721 aa11.97□□□□□ -0.49
DDX41-209ENST00000508279 MPNDQ8N594 471 aa11.97□□□□□ -0.49
DDX41-209ENST00000508279 JDP2Q8WYK2 163 aa11.97□□□□□ -0.49
DDX41-209ENST00000508279 CELF1Q92879 486 aaKnown RBP11.97□□□□□ -0.49
DDX41-209ENST00000508279 PSMD1Q99460 953 aa11.97□□□□□ -0.49
DDX41-209ENST00000508279 ZNF541Q9H0D2 1346 aa11.96□□□□□ -0.49
DDX41-209ENST00000508279 PPIP5K2O43314 1243 aa11.96□□□□□ -0.49
DDX41-209ENST00000508279 PDE8AO60658 829 aa11.96□□□□□ -0.49
DDX41-209ENST00000508279 TOMM70O94826 608 aa11.96□□□□□ -0.49
DDX41-209ENST00000508279 VEGFAP15692 232 aaPredicted RBP11.96□□□□□ -0.49
DDX41-209ENST00000508279 SLFN5Q08AF3 891 aa11.96□□□□□ -0.49
DDX41-209ENST00000508279 AOC3Q16853 763 aa11.96□□□□□ -0.49
DDX41-209ENST00000508279 CCDC152Q4G0S7 254 aa11.96□□□□□ -0.49
DDX41-209ENST00000508279 SLC4A10Q6U841 1118 aa11.96□□□□□ -0.49
DDX41-209ENST00000508279 UBE3BQ7Z3V4 1068 aa11.96□□□□□ -0.49
DDX41-209ENST00000508279 SP8Q8IXZ3 490 aa11.96□□□□□ -0.49
DDX41-209ENST00000508279 SEC31BQ9NQW1 1179 aa11.96□□□□□ -0.49
DDX41-209ENST00000508279 GJA3Q9Y6H8 435 aa11.96□□□□□ -0.49
DDX41-209ENST00000508279 COL4A1P02462 1669 aa11.95□□□□□ -0.5
DDX41-209ENST00000508279 GRIPAP1Q4V328 841 aa11.95□□□□□ -0.5
DDX41-209ENST00000508279 NIM1KQ8IY84 436 aa11.95□□□□□ -0.5
DDX41-209ENST00000508279 BCL2L13Q9BXK5 485 aa11.95□□□□□ -0.5
DDX41-209ENST00000508279 SNED1Q8TER0 1413 aa11.94□□□□□ -0.5
DDX41-209ENST00000508279 WDR90Q96KV7 1748 aa11.94□□□□□ -0.5
DDX41-209ENST00000508279 EIF6P56537 245 aaKnown RBP11.94□□□□□ -0.5
DDX41-209ENST00000508279 RPS8P62241 208 aaKnown RBP11.94□□□□□ -0.5
DDX41-209ENST00000508279 GCKRQ14397 625 aa11.94□□□□□ -0.5
DDX41-209ENST00000508279 SUPT20HQ8NEM7 779 aa11.94□□□□□ -0.5
DDX41-209ENST00000508279 NSFL1CQ9UNZ2 370 aaKnown RBP11.94□□□□□ -0.5
DDX41-209ENST00000508279 COL4A5P29400 1685 aa11.94□□□□□ -0.5
DDX41-209ENST00000508279 CDHR2Q9BYE9 1310 aa11.93□□□□□ -0.5
DDX41-209ENST00000508279 C6orf229H3BNL8 230 aa11.93□□□□□ -0.5
DDX41-209ENST00000508279 CTSWP56202 376 aa11.93□□□□□ -0.5
DDX41-209ENST00000508279 TMC4Q7Z404 712 aa11.93□□□□□ -0.5
DDX41-209ENST00000508279 LINS1Q8NG48 757 aa11.93□□□□□ -0.5
DDX41-209ENST00000508279 RBM46Q8TBY0 533 aaKnown RBP11.93□□□□□ -0.5
DDX41-209ENST00000508279 LRRC37AA6NMS7 1700 aa11.92□□□□□ -0.5
DDX41-209ENST00000508279 POTECB2RU33 542 aa11.92□□□□□ -0.5
DDX41-209ENST00000508279 H7C1W4 665 aa11.92□□□□□ -0.5
DDX41-209ENST00000508279 FZD9O00144 591 aa11.92□□□□□ -0.5
DDX41-209ENST00000508279 RIMBP2O15034 1052 aa11.92□□□□□ -0.5
DDX41-209ENST00000508279 GPSM2P81274 684 aa11.92□□□□□ -0.5
DDX41-209ENST00000508279 ANKRD18AQ8IVF6 992 aa11.92□□□□□ -0.5
DDX41-209ENST00000508279 GPR101Q96P66 508 aaPredicted RBP11.92□□□□□ -0.5
DDX41-209ENST00000508279 GREM2Q9H772 168 aa11.92□□□□□ -0.5
DDX41-209ENST00000508279 ANKIB1Q9P2G1 1089 aa11.92□□□□□ -0.5
DDX41-209ENST00000508279 CHMP3Q9Y3E7 222 aa11.92□□□□□ -0.5
DDX41-209ENST00000508279 SCN4AP35499 1836 aa11.92□□□□□ -0.5
DDX41-209ENST00000508279 HSPA6P17066 643 aa11.91□□□□□ -0.5
DDX41-209ENST00000508279 HNRNPUQ00839 825 aaKnown RBP eCLIP11.91□□□□□ -0.5
DDX41-209ENST00000508279 EAPPQ56P03 285 aaPredicted RBP11.91□□□□□ -0.5
DDX41-209ENST00000508279 BEND3Q5T5X7 828 aa11.91□□□□□ -0.5
DDX41-209ENST00000508279 MRPL50Q8N5N7 158 aaKnown RBP11.91□□□□□ -0.5
DDX41-209ENST00000508279 SMC1BQ8NDV3 1235 aa11.91□□□□□ -0.5
DDX41-209ENST00000508279 TTLL11Q8NHH1 800 aa11.91□□□□□ -0.5
DDX41-209ENST00000508279 SSH1Q8WYL5 1049 aa11.91□□□□□ -0.5
DDX41-209ENST00000508279 CDC5LQ99459 802 aaKnown RBP11.91□□□□□ -0.5
DDX41-209ENST00000508279 SMC4Q9NTJ3 1288 aa11.91□□□□□ -0.5
DDX41-209ENST00000508279 C9orf78Q9NZ63 289 aaPredicted RBP11.91□□□□□ -0.5
DDX41-209ENST00000508279 IQCA1LA6NCM1 817 aa11.9□□□□□ -0.5
DDX41-209ENST00000508279 G3V3G9 751 aa11.9□□□□□ -0.5
DDX41-209ENST00000508279 UFL1O94874 794 aa11.9□□□□□ -0.5
DDX41-209ENST00000508279 WASHC4Q2M389 1173 aa11.9□□□□□ -0.5
DDX41-209ENST00000508279 DCAF8Q5TAQ9 597 aa11.9□□□□□ -0.5
DDX41-209ENST00000508279 GPC2Q8N158 579 aa11.9□□□□□ -0.5
DDX41-209ENST00000508279 RTFDC1Q9BY42 306 aaPredicted RBP11.9□□□□□ -0.5
DDX41-209ENST00000508279 SRCIN1Q9C0H9 1055 aa11.9□□□□□ -0.5
DDX41-209ENST00000508279 DBNDD1Q9H9R9 158 aa11.9□□□□□ -0.5
DDX41-209ENST00000508279 POLLQ9UGP5 575 aa11.9□□□□□ -0.5
DDX41-209ENST00000508279 CLEC11AQ9Y240 323 aa11.9□□□□□ -0.5
DDX41-209ENST00000508279 DUOX1Q9NRD9 1551 aa11.89□□□□□ -0.51
DDX41-209ENST00000508279 RAD17O75943 681 aa11.89□□□□□ -0.51
DDX41-209ENST00000508279 POTEIP0CG38 1075 aa11.89□□□□□ -0.51
DDX41-209ENST00000508279 POTEJP0CG39 1038 aa11.89□□□□□ -0.51
DDX41-209ENST00000508279 LMOD1P29536 600 aaPredicted RBP11.89□□□□□ -0.51
DDX41-209ENST00000508279 IGHMBP2P38935 993 aaKnown RBP11.89□□□□□ -0.51
DDX41-209ENST00000508279 KIAA2012Q0VF49 1180 aa11.89□□□□□ -0.51
DDX41-209ENST00000508279 FSTL1Q12841 308 aa11.89□□□□□ -0.51
DDX41-209ENST00000508279 DOK7Q18PE1 504 aa11.89□□□□□ -0.51
DDX41-209ENST00000508279 FAM161AQ3B820 660 aa11.89□□□□□ -0.51
DDX41-209ENST00000508279 EYA3Q99504 573 aa11.89□□□□□ -0.51
DDX41-209ENST00000508279 HACL1Q9UJ83 578 aa11.89□□□□□ -0.51
DDX41-209ENST00000508279 GGA1Q9UJY5 639 aa11.89□□□□□ -0.51
DDX41-209ENST00000508279 ZNRF3Q9ULT6 936 aa11.89□□□□□ -0.51
DDX41-209ENST00000508279 ITGA6P23229 1130 aa11.88□□□□□ -0.51
DDX41-209ENST00000508279 EPHX2P34913 555 aa11.88□□□□□ -0.51
DDX41-209ENST00000508279 CASP7P55210 303 aa11.88□□□□□ -0.51
DDX41-209ENST00000508279 CXCL9Q07325 125 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 156.1 ms