RNA–Protein interactions for RNA: ENST00000508006.1

SNCB-204, Transcript of synuclein beta, humanhuman

TSL 2

Gene SNCB, Length 969 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-204ENST00000508006 ALDH1L1O75891 902 aa28.3■■■□□ 2.12
SNCB-204ENST00000508006 IGKV5-2P06315 115 aa28.3■■■□□ 2.12
SNCB-204ENST00000508006 CCDC93Q567U6 631 aa28.3■■■□□ 2.12
SNCB-204ENST00000508006 SUSD4Q5VX71 490 aa28.3■■■□□ 2.12
SNCB-204ENST00000508006 CREBZFQ9NS37 354 aa28.3■■■□□ 2.12
SNCB-204ENST00000508006 CWC25Q9NXE8 425 aaPredicted RBP28.3■■■□□ 2.12
SNCB-204ENST00000508006 RIC1Q4ADV7 1423 aa28.29■■■□□ 2.12
SNCB-204ENST00000508006 NEURL1BA8MQ27 555 aa28.29■■■□□ 2.12
SNCB-204ENST00000508006 NTSR2O95665 410 aa28.29■■■□□ 2.12
SNCB-204ENST00000508006 NPR1P16066 1061 aa28.29■■■□□ 2.12
SNCB-204ENST00000508006 SRCIN1Q9C0H9 1055 aa28.29■■■□□ 2.12
SNCB-204ENST00000508006 FAM177BA6PVY3 158 aa28.28■■■□□ 2.12
SNCB-204ENST00000508006 MS4A1P11836 297 aa28.28■■■□□ 2.12
SNCB-204ENST00000508006 SLC4A10Q6U841 1118 aa28.28■■■□□ 2.12
SNCB-204ENST00000508006 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.28■■■□□ 2.12
SNCB-204ENST00000508006 MKRN1Q9UHC7 482 aaKnown RBP28.28■■■□□ 2.12
SNCB-204ENST00000508006 ABCC4O15439 1325 aa28.27■■■□□ 2.12
SNCB-204ENST00000508006 POTEIP0CG38 1075 aa28.27■■■□□ 2.12
SNCB-204ENST00000508006 POTEJP0CG39 1038 aa28.27■■■□□ 2.12
SNCB-204ENST00000508006 TRIM27P14373 513 aa28.27■■■□□ 2.12
SNCB-204ENST00000508006 GTF2E1P29083 439 aaPredicted RBP28.27■■■□□ 2.12
SNCB-204ENST00000508006 CCT4P50991 539 aaKnown RBP28.27■■■□□ 2.12
SNCB-204ENST00000508006 TRMT112Q9UI30 125 aaKnown RBP28.27■■■□□ 2.12
SNCB-204ENST00000508006 LAMB2P55268 1798 aa28.27■■■□□ 2.12
SNCB-204ENST00000508006 GCKRQ14397 625 aa28.26■■■□□ 2.11
SNCB-204ENST00000508006 CWF19L2Q2TBE0 894 aaKnown RBP28.26■■■□□ 2.11
SNCB-204ENST00000508006 ZBTB38Q8NAP3 1195 aaPredicted RBP28.26■■■□□ 2.11
SNCB-204ENST00000508006 SH3TC1Q8TE82 1336 aa28.25■■■□□ 2.11
SNCB-204ENST00000508006 PCCAP05165 728 aaPredicted RBP28.25■■■□□ 2.11
SNCB-204ENST00000508006 HSP90B1P14625 803 aaKnown RBP28.25■■■□□ 2.11
SNCB-204ENST00000508006 SLC10A5Q5PT55 438 aa28.24■■■□□ 2.11
SNCB-204ENST00000508006 INTS3Q68E01 1043 aaKnown RBP28.24■■■□□ 2.11
SNCB-204ENST00000508006 C7orf43Q8WVR3 580 aa28.24■■■□□ 2.11
SNCB-204ENST00000508006 ALDH1B1P30837 517 aa28.23■■■□□ 2.11
SNCB-204ENST00000508006 FKBP4Q02790 459 aaKnown RBP eCLIP28.23■■■□□ 2.11
SNCB-204ENST00000508006 LDHDQ86WU2 507 aa28.23■■■□□ 2.11
SNCB-204ENST00000508006 RTKN2Q8IZC4 609 aa28.23■■■□□ 2.11
SNCB-204ENST00000508006 EAPPQ56P03 285 aaPredicted RBP28.22■■■□□ 2.11
SNCB-204ENST00000508006 DDX60Q8IY21 1712 aaKnown RBP28.22■■■□□ 2.11
SNCB-204ENST00000508006 TAF1DQ9H5J8 278 aaPredicted RBP28.22■■■□□ 2.11
SNCB-204ENST00000508006 ZNF277Q9NRM2 450 aaPredicted RBP28.22■■■□□ 2.11
SNCB-204ENST00000508006 CLEC11AQ9Y240 323 aa28.22■■■□□ 2.11
SNCB-204ENST00000508006 CDHR2Q9BYE9 1310 aa28.21■■■□□ 2.11
SNCB-204ENST00000508006 DZIP1LQ8IYY4 767 aaKnown RBP28.21■■■□□ 2.11
SNCB-204ENST00000508006 L3MBTL3Q96JM7 780 aaPredicted RBP28.21■■■□□ 2.11
SNCB-204ENST00000508006 KLRG2A4D1S0 409 aaPredicted RBP28.2■■■□□ 2.1
SNCB-204ENST00000508006 H7C1W4 665 aa28.2■■■□□ 2.1
SNCB-204ENST00000508006 NUTM1Q86Y26 1132 aa28.2■■■□□ 2.1
SNCB-204ENST00000508006 FTSJ3Q8IY81 847 aaKnown RBP28.2■■■□□ 2.1
SNCB-204ENST00000508006 FAM89AQ96GI7 184 aa28.19■■■□□ 2.1
SNCB-204ENST00000508006 HACL1Q9UJ83 578 aa28.19■■■□□ 2.1
SNCB-204ENST00000508006 SCN4AP35499 1836 aa28.18■■■□□ 2.1
SNCB-204ENST00000508006 GRM8O00222 908 aa28.18■■■□□ 2.1
SNCB-204ENST00000508006 OLFM4Q6UX06 510 aa28.18■■■□□ 2.1
SNCB-204ENST00000508006 C9orf78Q9NZ63 289 aaPredicted RBP28.18■■■□□ 2.1
SNCB-204ENST00000508006 MYH3P11055 1940 aa28.18■■■□□ 2.1
SNCB-204ENST00000508006 UTYO14607 1347 aa28.18■■■□□ 2.1
SNCB-204ENST00000508006 ABCC12Q96J65 1359 aa28.17■■■□□ 2.1
SNCB-204ENST00000508006 PDE3AQ14432 1141 aa28.17■■■□□ 2.1
SNCB-204ENST00000508006 CLUAP1Q96AJ1 413 aa28.17■■■□□ 2.1
SNCB-204ENST00000508006 SYNE4Q8N205 404 aa28.16■■■□□ 2.1
SNCB-204ENST00000508006 NLRP3Q96P20 1036 aa28.16■■■□□ 2.1
SNCB-204ENST00000508006 TMEM88BA6NKF7 163 aa28.15■■■□□ 2.1
SNCB-204ENST00000508006 IRS4O14654 1257 aaPredicted RBP28.15■■■□□ 2.1
SNCB-204ENST00000508006 IARSP41252 1262 aaKnown RBP28.15■■■□□ 2.1
SNCB-204ENST00000508006 UBE3BQ7Z3V4 1068 aa28.15■■■□□ 2.1
SNCB-204ENST00000508006 HDAC5Q9UQL6 1122 aa28.15■■■□□ 2.1
SNCB-204ENST00000508006 PASKQ96RG2 1323 aa28.15■■■□□ 2.1
SNCB-204ENST00000508006 ZNF541Q9H0D2 1346 aa28.15■■■□□ 2.1
SNCB-204ENST00000508006 EPHX2P34913 555 aa28.14■■■□□ 2.1
SNCB-204ENST00000508006 CASP7P55210 303 aa28.14■■■□□ 2.1
SNCB-204ENST00000508006 PNMA8AQ86V59 439 aaPredicted RBP28.14■■■□□ 2.1
SNCB-204ENST00000508006 JDP2Q8WYK2 163 aa28.14■■■□□ 2.1
SNCB-204ENST00000508006 CNTNAP1P78357 1384 aa28.13■■■□□ 2.09
SNCB-204ENST00000508006 PDE8AO60658 829 aa28.13■■■□□ 2.09
SNCB-204ENST00000508006 CRY2Q49AN0 593 aa28.13■■■□□ 2.09
SNCB-204ENST00000508006 AIDAQ96BJ3 306 aa28.13■■■□□ 2.09
SNCB-204ENST00000508006 PLA2G12BQ9BX93 195 aa28.13■■■□□ 2.09
SNCB-204ENST00000508006 USP44Q9H0E7 712 aa28.13■■■□□ 2.09
SNCB-204ENST00000508006 TNNQ9UQP3 1299 aa28.13■■■□□ 2.09
SNCB-204ENST00000508006 RRP1P56182 461 aaKnown RBP28.12■■■□□ 2.09
SNCB-204ENST00000508006 TMEM57Q8N5G2 664 aa28.12■■■□□ 2.09
SNCB-204ENST00000508006 PLIN1O60240 522 aa28.11■■■□□ 2.09
SNCB-204ENST00000508006 ITGBL1O95965 494 aaPredicted RBP28.11■■■□□ 2.09
SNCB-204ENST00000508006 RTL5Q5HYW3 569 aaPredicted RBP28.11■■■□□ 2.09
SNCB-204ENST00000508006 RPGRQ92834 1020 aaKnown RBP28.11■■■□□ 2.09
SNCB-204ENST00000508006 FZD9O00144 591 aa28.1■■■□□ 2.09
SNCB-204ENST00000508006 GNAI3P08754 354 aa28.1■■■□□ 2.09
SNCB-204ENST00000508006 RLBP1P12271 317 aa28.1■■■□□ 2.09
SNCB-204ENST00000508006 HCLS1P14317 486 aaPredicted RBP28.1■■■□□ 2.09
SNCB-204ENST00000508006 SF3B3Q15393 1217 aaKnown RBP28.1■■■□□ 2.09
SNCB-204ENST00000508006 FOXN1O15353 648 aa28.09■■■□□ 2.09
SNCB-204ENST00000508006 VEGFBP49765 207 aa28.09■■■□□ 2.09
SNCB-204ENST00000508006 CNTROBQ8N137 903 aa28.09■■■□□ 2.09
SNCB-204ENST00000508006 GPC2Q8N158 579 aa28.09■■■□□ 2.09
SNCB-204ENST00000508006 NBPF7P0C2Y1 421 aaPredicted RBP28.08■■■□□ 2.09
SNCB-204ENST00000508006 EIF6P56537 245 aaKnown RBP28.08■■■□□ 2.09
SNCB-204ENST00000508006 CC2D2BQ6DHV5 1058 aa28.08■■■□□ 2.09
SNCB-204ENST00000508006 PSMD1Q99460 953 aa28.08■■■□□ 2.09
SNCB-204ENST00000508006 CHMP4BQ9H444 224 aaKnown RBP28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms