RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 BRINP3Q76B58 766 aa9.18□□□□□ -0.94
CLCN3-206ENST00000507875 PACS2Q86VP3 889 aa9.18□□□□□ -0.94
CLCN3-206ENST00000507875 TMEM87AQ8NBN3 555 aa9.18□□□□□ -0.94
CLCN3-206ENST00000507875 PCDHB9Q9Y5E1 797 aa9.18□□□□□ -0.94
CLCN3-206ENST00000507875 SHPRHQ149N8 1683 aa9.18□□□□□ -0.94
CLCN3-206ENST00000507875 ACEP12821 1306 aa9.18□□□□□ -0.94
CLCN3-206ENST00000507875 SPATA31A6Q5VVP1 1343 aa9.18□□□□□ -0.94
CLCN3-206ENST00000507875 MARCH6O60337 910 aa9.17□□□□□ -0.94
CLCN3-206ENST00000507875 RAB11FIP3O75154 756 aa9.17□□□□□ -0.94
CLCN3-206ENST00000507875 BLOC1S3Q6QNY0 202 aa9.17□□□□□ -0.94
CLCN3-206ENST00000507875 KIAA1468Q9P260 1216 aa9.17□□□□□ -0.94
CLCN3-206ENST00000507875 MARF1Q9Y4F3 1742 aaKnown RBP9.17□□□□□ -0.94
CLCN3-206ENST00000507875 FMNL1O95466 1100 aaPredicted RBP9.17□□□□□ -0.94
CLCN3-206ENST00000507875 RETREG3Q86VR2 466 aa9.17□□□□□ -0.94
CLCN3-206ENST00000507875 TPCN2Q8NHX9 752 aa9.17□□□□□ -0.94
CLCN3-206ENST00000507875 KCNG1Q9UIX4 513 aa9.17□□□□□ -0.94
CLCN3-206ENST00000507875 PIK3C2AO00443 1686 aa9.17□□□□□ -0.94
CLCN3-206ENST00000507875 PHRF1Q9P1Y6 1649 aaKnown RBP9.17□□□□□ -0.94
CLCN3-206ENST00000507875 FYB1O15117 783 aa9.16□□□□□ -0.94
CLCN3-206ENST00000507875 PNISRQ8TF01 805 aaKnown RBP9.16□□□□□ -0.94
CLCN3-206ENST00000507875 VTI1AQ96AJ9 217 aa9.16□□□□□ -0.94
CLCN3-206ENST00000507875 CCDC85AQ96PX6 553 aaPredicted RBP9.16□□□□□ -0.94
CLCN3-206ENST00000507875 CAPN10Q9HC96 672 aa9.16□□□□□ -0.94
CLCN3-206ENST00000507875 EGFL7Q9UHF1 273 aa9.16□□□□□ -0.94
CLCN3-206ENST00000507875 C1orf167Q5SNV9 1468 aa9.16□□□□□ -0.94
CLCN3-206ENST00000507875 TTC21BQ7Z4L5 1316 aa9.16□□□□□ -0.94
CLCN3-206ENST00000507875 FANCCQ00597 558 aa9.16□□□□□ -0.94
CLCN3-206ENST00000507875 NGEFQ8N5V2 710 aa9.16□□□□□ -0.94
CLCN3-206ENST00000507875 LRRC59Q96AG4 307 aaKnown RBP9.16□□□□□ -0.94
CLCN3-206ENST00000507875 CFAP53Q96M91 514 aa9.16□□□□□ -0.94
CLCN3-206ENST00000507875 AHDC1Q5TGY3 1603 aaPredicted RBP9.16□□□□□ -0.94
CLCN3-206ENST00000507875 OVOS2A0A0J9YW53 1432 aa9.16□□□□□ -0.94
CLCN3-206ENST00000507875 OVOS2Q6IE36 1432 aa9.16□□□□□ -0.94
CLCN3-206ENST00000507875 KIF24Q5T7B8 1368 aa9.16□□□□□ -0.94
CLCN3-206ENST00000507875 RNF40O75150 1001 aa9.15□□□□□ -0.94
CLCN3-206ENST00000507875 F12P00748 615 aaPredicted RBP9.15□□□□□ -0.94
CLCN3-206ENST00000507875 OXLD1Q5BKU9 147 aa9.15□□□□□ -0.94
CLCN3-206ENST00000507875 RGL4Q8IZJ4 473 aa9.15□□□□□ -0.94
CLCN3-206ENST00000507875 TSEN2Q8NCE0 465 aaKnown RBP9.15□□□□□ -0.94
CLCN3-206ENST00000507875 PMFBP1Q8TBY8 1022 aa9.15□□□□□ -0.94
CLCN3-206ENST00000507875 ALS2Q96Q42 1657 aa9.15□□□□□ -0.94
CLCN3-206ENST00000507875 BLMP54132 1417 aaPredicted RBP9.15□□□□□ -0.94
CLCN3-206ENST00000507875 DNAJA1P31689 397 aaKnown RBP9.15□□□□□ -0.94
CLCN3-206ENST00000507875 MEX3CQ5U5Q3 659 aaKnown RBP9.15□□□□□ -0.94
CLCN3-206ENST00000507875 CCDC102BQ68D86 513 aa9.15□□□□□ -0.94
CLCN3-206ENST00000507875 FAM9BQ8IZU0 186 aa9.15□□□□□ -0.94
CLCN3-206ENST00000507875 SECISBP2LQ93073 1101 aaKnown RBP9.15□□□□□ -0.94
CLCN3-206ENST00000507875 CDK12Q9NYV4 1490 aaPredicted RBP9.15□□□□□ -0.95
CLCN3-206ENST00000507875 EML3Q32P44 896 aa9.14□□□□□ -0.95
CLCN3-206ENST00000507875 GPR153Q6NV75 609 aa9.14□□□□□ -0.95
CLCN3-206ENST00000507875 NGDNQ8NEJ9 315 aaKnown RBP9.14□□□□□ -0.95
CLCN3-206ENST00000507875 PLCD4Q9BRC7 762 aa9.14□□□□□ -0.95
CLCN3-206ENST00000507875 COL16A1Q07092 1604 aaPredicted RBP9.14□□□□□ -0.95
CLCN3-206ENST00000507875 NHSL1Q5SYE7 1610 aa9.14□□□□□ -0.95
CLCN3-206ENST00000507875 PTPREP23469 700 aa9.14□□□□□ -0.95
CLCN3-206ENST00000507875 ATP6V1AP38606 617 aa9.14□□□□□ -0.95
CLCN3-206ENST00000507875 FKBP4Q02790 459 aaKnown RBP eCLIP9.14□□□□□ -0.95
CLCN3-206ENST00000507875 MICAL1Q8TDZ2 1067 aa9.14□□□□□ -0.95
CLCN3-206ENST00000507875 COG3Q96JB2 828 aa9.14□□□□□ -0.95
CLCN3-206ENST00000507875 HINFPQ9BQA5 517 aa9.14□□□□□ -0.95
CLCN3-206ENST00000507875 PARP2Q9UGN5 583 aa9.14□□□□□ -0.95
CLCN3-206ENST00000507875 NAP1L2Q9ULW6 460 aaPredicted RBP9.14□□□□□ -0.95
CLCN3-206ENST00000507875 DUSP9Q99956 384 aaKnown RBP9.13□□□□□ -0.95
CLCN3-206ENST00000507875 COL3A1P02461 1466 aaPredicted RBP9.13□□□□□ -0.95
CLCN3-206ENST00000507875 PNPLA6Q8IY17 1366 aa9.13□□□□□ -0.95
CLCN3-206ENST00000507875 GTF2IP78347 998 aa9.13□□□□□ -0.95
CLCN3-206ENST00000507875 ZSCAN29Q8IWY8 852 aaPredicted RBP9.13□□□□□ -0.95
CLCN3-206ENST00000507875 SIX5Q8N196 739 aa9.13□□□□□ -0.95
CLCN3-206ENST00000507875 PCDHGB7Q9Y5F8 929 aa9.13□□□□□ -0.95
CLCN3-206ENST00000507875 ABCC6O95255 1503 aa9.13□□□□□ -0.95
CLCN3-206ENST00000507875 SBNO1A3KN83 1393 aa9.12□□□□□ -0.95
CLCN3-206ENST00000507875 HOXB3P14651 431 aaPredicted RBP9.12□□□□□ -0.95
CLCN3-206ENST00000507875 MAPK8P45983 427 aa9.12□□□□□ -0.95
CLCN3-206ENST00000507875 PSME1Q06323 249 aa9.12□□□□□ -0.95
CLCN3-206ENST00000507875 SLIT3O75094 1523 aa9.12□□□□□ -0.95
CLCN3-206ENST00000507875 SEC13P55735 322 aa9.12□□□□□ -0.95
CLCN3-206ENST00000507875 NOL8Q76FK4 1167 aaKnown RBP9.12□□□□□ -0.95
CLCN3-206ENST00000507875 KCNK17Q96T54 332 aa9.12□□□□□ -0.95
CLCN3-206ENST00000507875 PNNQ9H307 717 aaKnown RBP9.12□□□□□ -0.95
CLCN3-206ENST00000507875 ZBED9Q6R2W3 1325 aa9.12□□□□□ -0.95
CLCN3-206ENST00000507875 NPHP3Q7Z494 1330 aa9.12□□□□□ -0.95
CLCN3-206ENST00000507875 LTN1O94822 1766 aa9.11□□□□□ -0.95
CLCN3-206ENST00000507875 WDR43Q15061 677 aaKnown RBP eCLIP9.11□□□□□ -0.95
CLCN3-206ENST00000507875 ESCO1Q5FWF5 840 aa9.11□□□□□ -0.95
CLCN3-206ENST00000507875 ZNF772Q68DY9 489 aaPredicted RBP9.11□□□□□ -0.95
CLCN3-206ENST00000507875 STAU1O95793 577 aaKnown RBP9.11□□□□□ -0.95
CLCN3-206ENST00000507875 CNGB1Q14028 1251 aaPredicted RBP9.11□□□□□ -0.95
CLCN3-206ENST00000507875 MORN1Q5T089 497 aa9.11□□□□□ -0.95
CLCN3-206ENST00000507875 LARGE2Q8N3Y3 721 aa9.11□□□□□ -0.95
CLCN3-206ENST00000507875 ORAI2Q96SN7 254 aa9.11□□□□□ -0.95
CLCN3-206ENST00000507875 NUDCQ9Y266 331 aa9.11□□□□□ -0.95
CLCN3-206ENST00000507875 CRYBG1Q9Y4K1 1723 aa9.11□□□□□ -0.95
CLCN3-206ENST00000507875 SAMD7Q7Z3H4 446 aa9.1□□□□□ -0.95
CLCN3-206ENST00000507875 ADAM32Q8TC27 787 aa9.1□□□□□ -0.95
CLCN3-206ENST00000507875 GGNBP2Q9H3C7 697 aa9.1□□□□□ -0.95
CLCN3-206ENST00000507875 CCDC87Q9NVE4 849 aa9.1□□□□□ -0.95
CLCN3-206ENST00000507875 RGS17Q9UGC6 210 aaPredicted RBP9.1□□□□□ -0.95
CLCN3-206ENST00000507875 RTL1A6NKG5 1358 aa9.1□□□□□ -0.95
CLCN3-206ENST00000507875 MPSTP25325 297 aa9.1□□□□□ -0.95
CLCN3-206ENST00000507875 CTHP32929 405 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms