RNA–Protein interactions for RNA: ENST00000507829.5

CCHCR1-224, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-224ENST00000507829 FRAT1Q92837 279 aaPredicted RBP25.51■■□□□ 1.67
CCHCR1-224ENST00000507829 BBOX1O75936 387 aa25.5■■□□□ 1.67
CCHCR1-224ENST00000507829 CCT4P50991 539 aaKnown RBP25.5■■□□□ 1.67
CCHCR1-224ENST00000507829 ATF7IPQ6VMQ6 1270 aa25.5■■□□□ 1.67
CCHCR1-224ENST00000507829 UTYO14607 1347 aa25.49■■□□□ 1.67
CCHCR1-224ENST00000507829 PPEF1O14829 653 aaPredicted RBP25.49■■□□□ 1.67
CCHCR1-224ENST00000507829 TTLL11Q8NHH1 800 aa25.49■■□□□ 1.67
CCHCR1-224ENST00000507829 CHD4Q14839 1912 aa25.49■■□□□ 1.67
CCHCR1-224ENST00000507829 TRIM27P14373 513 aa25.48■■□□□ 1.67
CCHCR1-224ENST00000507829 CCDC93Q567U6 631 aa25.48■■□□□ 1.67
CCHCR1-224ENST00000507829 CC2D2BQ6DHV5 1058 aa25.48■■□□□ 1.67
CCHCR1-224ENST00000507829 ZKSCAN2Q63HK3 967 aa25.47■■□□□ 1.67
CCHCR1-224ENST00000507829 NFKBIEO00221 500 aa25.46■■□□□ 1.67
CCHCR1-224ENST00000507829 CSF1RP07333 972 aa25.46■■□□□ 1.67
CCHCR1-224ENST00000507829 TMC4Q7Z404 712 aa25.46■■□□□ 1.67
CCHCR1-224ENST00000507829 RTKN2Q8IZC4 609 aa25.46■■□□□ 1.67
CCHCR1-224ENST00000507829 ATP6V0A2Q9Y487 856 aa25.46■■□□□ 1.67
CCHCR1-224ENST00000507829 MYH3P11055 1940 aa25.45■■□□□ 1.67
CCHCR1-224ENST00000507829 NBPF7P0C2Y1 421 aaPredicted RBP25.45■■□□□ 1.66
CCHCR1-224ENST00000507829 FOXO4P98177 505 aa25.45■■□□□ 1.66
CCHCR1-224ENST00000507829 GRIPAP1Q4V328 841 aa25.45■■□□□ 1.66
CCHCR1-224ENST00000507829 INTS3Q68E01 1043 aaKnown RBP25.45■■□□□ 1.66
CCHCR1-224ENST00000507829 OLFM4Q6UX06 510 aa25.45■■□□□ 1.66
CCHCR1-224ENST00000507829 CELF1Q92879 486 aaKnown RBP25.45■■□□□ 1.66
CCHCR1-224ENST00000507829 CCDC85AQ96PX6 553 aaPredicted RBP25.45■■□□□ 1.66
CCHCR1-224ENST00000507829 USP44Q9H0E7 712 aa25.45■■□□□ 1.66
CCHCR1-224ENST00000507829 SEC31BQ9NQW1 1179 aa25.45■■□□□ 1.66
CCHCR1-224ENST00000507829 RCAN3Q9UKA8 241 aa25.45■■□□□ 1.66
CCHCR1-224ENST00000507829 RTL9Q8NET4 1388 aa25.44■■□□□ 1.66
CCHCR1-224ENST00000507829 LTBP3Q9NS15 1303 aa25.44■■□□□ 1.66
CCHCR1-224ENST00000507829 RPS8P62241 208 aaKnown RBP25.44■■□□□ 1.66
CCHCR1-224ENST00000507829 RASSF7Q02833 373 aa25.44■■□□□ 1.66
CCHCR1-224ENST00000507829 SP8Q8IXZ3 490 aa25.44■■□□□ 1.66
CCHCR1-224ENST00000507829 TMX4Q9H1E5 349 aaPredicted RBP25.44■■□□□ 1.66
CCHCR1-224ENST00000507829 GREM2Q9H772 168 aa25.44■■□□□ 1.66
CCHCR1-224ENST00000507829 FER1L6Q2WGJ9 1857 aa25.44■■□□□ 1.66
CCHCR1-224ENST00000507829 TAF1P21675 1872 aa25.43■■□□□ 1.66
CCHCR1-224ENST00000507829 YY1P25490 414 aa25.42■■□□□ 1.66
CCHCR1-224ENST00000507829 SUCLG2Q96I99 432 aa25.42■■□□□ 1.66
CCHCR1-224ENST00000507829 TAOK3Q9H2K8 898 aa25.42■■□□□ 1.66
CCHCR1-224ENST00000507829 TNNQ9UQP3 1299 aa25.42■■□□□ 1.66
CCHCR1-224ENST00000507829 SNED1Q8TER0 1413 aa25.42■■□□□ 1.66
CCHCR1-224ENST00000507829 LMNB1P20700 586 aa25.41■■□□□ 1.66
CCHCR1-224ENST00000507829 FKBP4Q02790 459 aaKnown RBP eCLIP25.41■■□□□ 1.66
CCHCR1-224ENST00000507829 EPHA10Q5JZY3 1008 aa25.41■■□□□ 1.66
CCHCR1-224ENST00000507829 CLUAP1Q96AJ1 413 aa25.41■■□□□ 1.66
CCHCR1-224ENST00000507829 CDC5LQ99459 802 aaKnown RBP25.41■■□□□ 1.66
CCHCR1-224ENST00000507829 C9orf131Q5VYM1 1079 aa25.4■■□□□ 1.66
CCHCR1-224ENST00000507829 ANKRD18AQ8IVF6 992 aa25.4■■□□□ 1.66
CCHCR1-224ENST00000507829 KAZALD1Q96I82 304 aa25.4■■□□□ 1.66
CCHCR1-224ENST00000507829 PSMD1Q99460 953 aa25.4■■□□□ 1.66
CCHCR1-224ENST00000507829 COL4A1P02462 1669 aa25.39■■□□□ 1.66
CCHCR1-224ENST00000507829 ITGA6P23229 1130 aa25.39■■□□□ 1.66
CCHCR1-224ENST00000507829 PRELPP51888 382 aa25.39■■□□□ 1.66
CCHCR1-224ENST00000507829 LMBR1LQ6UX01 489 aa25.39■■□□□ 1.66
CCHCR1-224ENST00000507829 SLC51AQ86UW1 340 aa25.39■■□□□ 1.66
CCHCR1-224ENST00000507829 SBF1O95248 1867 aa25.38■■□□□ 1.65
CCHCR1-224ENST00000507829 FAM161AQ3B820 660 aa25.38■■□□□ 1.65
CCHCR1-224ENST00000507829 RNF181Q9P0P0 153 aa25.38■■□□□ 1.65
CCHCR1-224ENST00000507829 DZIP1LQ8IYY4 767 aaKnown RBP25.37■■□□□ 1.65
CCHCR1-224ENST00000507829 ANKRD18BA2A2Z9 1011 aa25.36■■□□□ 1.65
CCHCR1-224ENST00000507829 UBTFL1P0CB47 393 aaPredicted RBP25.36■■□□□ 1.65
CCHCR1-224ENST00000507829 IFIT5Q13325 482 aaKnown RBP25.36■■□□□ 1.65
CCHCR1-224ENST00000507829 FTSJ3Q8IY81 847 aaKnown RBP25.36■■□□□ 1.65
CCHCR1-224ENST00000507829 MPNDQ8N594 471 aa25.36■■□□□ 1.65
CCHCR1-224ENST00000507829 TMEM57Q8N5G2 664 aa25.36■■□□□ 1.65
CCHCR1-224ENST00000507829 BICC1Q9H694 974 aaKnown RBP25.36■■□□□ 1.65
CCHCR1-224ENST00000507829 HDAC5Q9UQL6 1122 aa25.36■■□□□ 1.65
CCHCR1-224ENST00000507829 LRRC37AA6NMS7 1700 aa25.36■■□□□ 1.65
CCHCR1-224ENST00000507829 RABL6Q3YEC7 729 aaPredicted RBP25.35■■□□□ 1.65
CCHCR1-224ENST00000507829 BSDC1Q9NW68 430 aaPredicted RBP25.35■■□□□ 1.65
CCHCR1-224ENST00000507829 CHMP3Q9Y3E7 222 aa25.35■■□□□ 1.65
CCHCR1-224ENST00000507829 MS4A1P11836 297 aa25.34■■□□□ 1.65
CCHCR1-224ENST00000507829 IGHMBP2P38935 993 aaKnown RBP25.34■■□□□ 1.65
CCHCR1-224ENST00000507829 DPP8Q6V1X1 898 aaPredicted RBP25.34■■□□□ 1.65
CCHCR1-224ENST00000507829 ANKRD44Q8N8A2 993 aa25.34■■□□□ 1.65
CCHCR1-224ENST00000507829 MEIS3Q99687 375 aa25.34■■□□□ 1.65
CCHCR1-224ENST00000507829 RTFDC1Q9BY42 306 aaPredicted RBP25.34■■□□□ 1.65
CCHCR1-224ENST00000507829 ZNF277Q9NRM2 450 aaPredicted RBP25.34■■□□□ 1.65
CCHCR1-224ENST00000507829 GNAI3P08754 354 aa25.33■■□□□ 1.65
CCHCR1-224ENST00000507829 RLBP1P12271 317 aa25.33■■□□□ 1.65
CCHCR1-224ENST00000507829 CCDC57Q2TAC2 916 aa25.33■■□□□ 1.65
CCHCR1-224ENST00000507829 SUPT20HQ8NEM7 779 aa25.33■■□□□ 1.65
CCHCR1-224ENST00000507829 VPS33BQ9H267 617 aa25.32■■□□□ 1.64
CCHCR1-224ENST00000507829 NSFL1CQ9UNZ2 370 aaKnown RBP25.32■■□□□ 1.64
CCHCR1-224ENST00000507829 CCDC88AQ3V6T2 1871 aa25.32■■□□□ 1.64
CCHCR1-224ENST00000507829 IARSP41252 1262 aaKnown RBP25.31■■□□□ 1.64
CCHCR1-224ENST00000507829 GPSM2P81274 684 aa25.31■■□□□ 1.64
CCHCR1-224ENST00000507829 MPHOSPH8Q99549 860 aa25.31■■□□□ 1.64
CCHCR1-224ENST00000507829 PODXL2Q9NZ53 605 aa25.31■■□□□ 1.64
CCHCR1-224ENST00000507829 ZC3H4Q9UPT8 1303 aaKnown RBP25.31■■□□□ 1.64
CCHCR1-224ENST00000507829 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.3■■□□□ 1.64
CCHCR1-224ENST00000507829 PLIN1O60240 522 aa25.29■■□□□ 1.64
CCHCR1-224ENST00000507829 MINPP1Q9UNW1 487 aa25.29■■□□□ 1.64
CCHCR1-224ENST00000507829 LRRFIP2Q9Y608 721 aaKnown RBP25.29■■□□□ 1.64
CCHCR1-224ENST00000507829 DICER1Q9UPY3 1922 aaKnown RBP25.29■■□□□ 1.64
CCHCR1-224ENST00000507829 TAF7LQ5H9L4 462 aa25.28■■□□□ 1.64
CCHCR1-224ENST00000507829 ITPRIPQ8IWB1 547 aa25.28■■□□□ 1.64
CCHCR1-224ENST00000507829 PANK1Q8TE04 598 aa25.28■■□□□ 1.64
CCHCR1-224ENST00000507829 ANKIB1Q9P2G1 1089 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms