RNA–Protein interactions for RNA: ENST00000507638.1

VEGFC-201, Transcript of vascular endothelial growth factor C, humanhuman

TSL 3

Gene VEGFC, Length 759 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-201ENST00000507638 FKBPLQ9UIM3 349 aa8.21□□□□□ -1.1
VEGFC-201ENST00000507638 VIRMAQ69YN4 1812 aaKnown RBP8.21□□□□□ -1.1
VEGFC-201ENST00000507638 PLEKHG2Q9H7P9 1386 aa8.21□□□□□ -1.1
VEGFC-201ENST00000507638 USP6P35125 1406 aa8.2□□□□□ -1.1
VEGFC-201ENST00000507638 ANKRD50Q9ULJ7 1429 aa8.2□□□□□ -1.1
VEGFC-201ENST00000507638 BTAF1O14981 1849 aa8.2□□□□□ -1.1
VEGFC-201ENST00000507638 TTC24A2A3L6 582 aaPredicted RBP8.2□□□□□ -1.1
VEGFC-201ENST00000507638 CENPBP07199 599 aaPredicted RBP8.2□□□□□ -1.1
VEGFC-201ENST00000507638 PKDCCQ504Y2 493 aa8.2□□□□□ -1.1
VEGFC-201ENST00000507638 NGDNQ8NEJ9 315 aaKnown RBP8.2□□□□□ -1.1
VEGFC-201ENST00000507638 CDCA7Q9BWT1 371 aaPredicted RBP8.2□□□□□ -1.1
VEGFC-201ENST00000507638 TOR4AQ9NXH8 423 aa8.2□□□□□ -1.1
VEGFC-201ENST00000507638 CDV3Q9UKY7 258 aaKnown RBP8.2□□□□□ -1.1
VEGFC-201ENST00000507638 TNRC6CQ9HCJ0 1690 aaKnown RBP8.2□□□□□ -1.1
VEGFC-201ENST00000507638 ZBTB7CA1YPR0 619 aa8.19□□□□□ -1.1
VEGFC-201ENST00000507638 SOX10P56693 466 aa8.19□□□□□ -1.1
VEGFC-201ENST00000507638 SKOR1P84550 965 aa8.19□□□□□ -1.1
VEGFC-201ENST00000507638 PTK2Q05397 1052 aa8.19□□□□□ -1.1
VEGFC-201ENST00000507638 LRRN4Q8WUT4 740 aa8.19□□□□□ -1.1
VEGFC-201ENST00000507638 MRGPRX2Q96LB1 330 aa8.19□□□□□ -1.1
VEGFC-201ENST00000507638 RNF181Q9P0P0 153 aa8.19□□□□□ -1.1
VEGFC-201ENST00000507638 ABCC11Q96J66 1382 aa8.19□□□□□ -1.1
VEGFC-201ENST00000507638 COL5A2P05997 1499 aaPredicted RBP8.19□□□□□ -1.1
VEGFC-201ENST00000507638 NHSQ6T4R5 1651 aa8.18□□□□□ -1.1
VEGFC-201ENST00000507638 LMO7Q8WWI1 1683 aa8.18□□□□□ -1.1
VEGFC-201ENST00000507638 TNFRSF10AO00220 468 aa8.18□□□□□ -1.1
VEGFC-201ENST00000507638 MAP2K1Q02750 393 aaPredicted RBP8.18□□□□□ -1.1
VEGFC-201ENST00000507638 SAFB2Q14151 953 aaKnown RBP eCLIP8.18□□□□□ -1.1
VEGFC-201ENST00000507638 AGERQ15109 404 aa8.18□□□□□ -1.1
VEGFC-201ENST00000507638 CTC1Q2NKJ3 1217 aa8.18□□□□□ -1.1
VEGFC-201ENST00000507638 CASP8AP2Q9UKL3 1982 aa8.18□□□□□ -1.1
VEGFC-201ENST00000507638 A0A0G2JLW4 131 aa8.17□□□□□ -1.1
VEGFC-201ENST00000507638 Q6ZNB5 142 aa8.17□□□□□ -1.1
VEGFC-201ENST00000507638 SMIM5Q71RC9 77 aa8.17□□□□□ -1.1
VEGFC-201ENST00000507638 LOC105371045A0A1W2PR82 267 aa8.16□□□□□ -1.1
VEGFC-201ENST00000507638 KIF1BO60333 1816 aa8.16□□□□□ -1.1
VEGFC-201ENST00000507638 CPDO75976 1380 aa8.16□□□□□ -1.1
VEGFC-201ENST00000507638 FXR1P51114 621 aaKnown RBP eCLIP8.16□□□□□ -1.1
VEGFC-201ENST00000507638 MCCD1P59942 119 aaPredicted RBP8.16□□□□□ -1.1
VEGFC-201ENST00000507638 DGKZQ13574 1117 aa8.16□□□□□ -1.1
VEGFC-201ENST00000507638 NR6A1Q15406 480 aa8.16□□□□□ -1.1
VEGFC-201ENST00000507638 LINC01559Q495D7 138 aa8.16□□□□□ -1.1
VEGFC-201ENST00000507638 SH3BP5LQ7L8J4 393 aa8.16□□□□□ -1.1
VEGFC-201ENST00000507638 PKD1L3Q7Z443 1732 aa8.16□□□□□ -1.1
VEGFC-201ENST00000507638 SH3RF1Q7Z6J0 888 aa8.16□□□□□ -1.1
VEGFC-201ENST00000507638 TRMT44Q8IYL2 757 aaKnown RBP8.16□□□□□ -1.1
VEGFC-201ENST00000507638 MAP4K5Q9Y4K4 846 aa8.16□□□□□ -1.1
VEGFC-201ENST00000507638 NDUFB9Q9Y6M9 179 aa8.16□□□□□ -1.1
VEGFC-201ENST00000507638 N4BP2Q86UW6 1770 aaPredicted RBP8.15□□□□□ -1.1
VEGFC-201ENST00000507638 SIAH2O43255 324 aa8.15□□□□□ -1.1
VEGFC-201ENST00000507638 AVPP01185 164 aa8.15□□□□□ -1.1
VEGFC-201ENST00000507638 FLIIQ13045 1269 aa8.15□□□□□ -1.1
VEGFC-201ENST00000507638 CRIPAKQ8N1N5 446 aa8.15□□□□□ -1.1
VEGFC-201ENST00000507638 SIRT1Q96EB6 747 aa8.15□□□□□ -1.1
VEGFC-201ENST00000507638 ZNF330Q9Y3S2 320 aaPredicted RBP8.15□□□□□ -1.1
VEGFC-201ENST00000507638 SBF1O95248 1867 aa8.15□□□□□ -1.11
VEGFC-201ENST00000507638 RPGRIP1LQ68CZ1 1315 aa8.14□□□□□ -1.11
VEGFC-201ENST00000507638 PRR36Q9H6K5 1346 aa8.14□□□□□ -1.11
VEGFC-201ENST00000507638 FAM187AA6NFU0 413 aa8.14□□□□□ -1.11
VEGFC-201ENST00000507638 GCP02774 474 aa8.14□□□□□ -1.11
VEGFC-201ENST00000507638 KANK4Q5T7N3 995 aaPredicted RBP8.14□□□□□ -1.11
VEGFC-201ENST00000507638 CDK15Q96Q40 435 aa8.14□□□□□ -1.11
VEGFC-201ENST00000507638 ARHGAP9Q9BRR9 750 aa8.14□□□□□ -1.11
VEGFC-201ENST00000507638 C1QTNF2Q9BXJ5 285 aa8.14□□□□□ -1.11
VEGFC-201ENST00000507638 WASF2Q9Y6W5 498 aa8.14□□□□□ -1.11
VEGFC-201ENST00000507638 ANKARQ7Z5J8 1434 aa8.13□□□□□ -1.11
VEGFC-201ENST00000507638 NUP155O75694 1391 aa8.13□□□□□ -1.11
VEGFC-201ENST00000507638 WNK3Q9BYP7 1800 aa8.13□□□□□ -1.11
VEGFC-201ENST00000507638 COL18A1P39060 1754 aa8.13□□□□□ -1.11
VEGFC-201ENST00000507638 WDR33Q9C0J8 1336 aaKnown RBP8.13□□□□□ -1.11
VEGFC-201ENST00000507638 GLTPD2A6NH11 291 aa8.13□□□□□ -1.11
VEGFC-201ENST00000507638 POTECB2RU33 542 aa8.13□□□□□ -1.11
VEGFC-201ENST00000507638 SMCPP49901 116 aaPredicted RBP8.13□□□□□ -1.11
VEGFC-201ENST00000507638 NR5A1Q13285 461 aa8.13□□□□□ -1.11
VEGFC-201ENST00000507638 DEFB115Q30KQ5 88 aa8.13□□□□□ -1.11
VEGFC-201ENST00000507638 ZBTB33Q86T24 672 aa8.13□□□□□ -1.11
VEGFC-201ENST00000507638 ABTB2Q8N961 1025 aa8.13□□□□□ -1.11
VEGFC-201ENST00000507638 TRPM1Q7Z4N2 1603 aa8.12□□□□□ -1.11
VEGFC-201ENST00000507638 TMEM88BA6NKF7 163 aa8.12□□□□□ -1.11
VEGFC-201ENST00000507638 ALDH1A1P00352 501 aa8.12□□□□□ -1.11
VEGFC-201ENST00000507638 TGFB2P61812 414 aa8.12□□□□□ -1.11
VEGFC-201ENST00000507638 TRAF7Q6Q0C0 670 aa8.12□□□□□ -1.11
VEGFC-201ENST00000507638 FLAD1Q8NFF5 587 aa8.12□□□□□ -1.11
VEGFC-201ENST00000507638 HMX1Q9NP08 348 aaPredicted RBP8.12□□□□□ -1.11
VEGFC-201ENST00000507638 ADGRF5Q8IZF2 1346 aa8.11□□□□□ -1.11
VEGFC-201ENST00000507638 WDR17Q8IZU2 1322 aa8.11□□□□□ -1.11
VEGFC-201ENST00000507638 ADH1CP00326 375 aa8.11□□□□□ -1.11
VEGFC-201ENST00000507638 NBPF20Q3BBV1 942 aa8.11□□□□□ -1.11
VEGFC-201ENST00000507638 NBPF15Q8N660 670 aa8.11□□□□□ -1.11
VEGFC-201ENST00000507638 SLC10A4Q96EP9 437 aa8.11□□□□□ -1.11
VEGFC-201ENST00000507638 PRAM1Q96QH2 718 aa8.11□□□□□ -1.11
VEGFC-201ENST00000507638 CARD10Q9BWT7 1032 aa8.11□□□□□ -1.11
VEGFC-201ENST00000507638 TRIM34Q9BYJ4 488 aa8.11□□□□□ -1.11
VEGFC-201ENST00000507638 CCNL1Q9UK58 526 aaPredicted RBP8.11□□□□□ -1.11
VEGFC-201ENST00000507638 KNDC1Q76NI1 1749 aa8.11□□□□□ -1.11
VEGFC-201ENST00000507638 PIK3C2AO00443 1686 aa8.11□□□□□ -1.11
VEGFC-201ENST00000507638 DPEP1P16444 411 aa8.1□□□□□ -1.11
VEGFC-201ENST00000507638 SMPD1P17405 629 aa8.1□□□□□ -1.11
VEGFC-201ENST00000507638 WWC1Q8IX03 1113 aa8.1□□□□□ -1.11
VEGFC-201ENST00000507638 MTMR14Q8NCE2 650 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms