RNA–Protein interactions for RNA: ENST00000507559.1

GNPDA1-209, Transcript of glucosamine-6-phosphate deaminase 1, humanhuman

TSL 3

Gene GNPDA1, Length 413 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPDA1-209ENST00000507559 MAP4K4O95819 1239 aaPredicted RBP11.71□□□□□ -0.53
GNPDA1-209ENST00000507559 MYL6BP14649 208 aa11.71□□□□□ -0.53
GNPDA1-209ENST00000507559 FAM196AQ6ZSG2 479 aa11.71□□□□□ -0.53
GNPDA1-209ENST00000507559 TMEM87AQ8NBN3 555 aa11.71□□□□□ -0.53
GNPDA1-209ENST00000507559 MAP4K1Q92918 833 aa11.71□□□□□ -0.53
GNPDA1-209ENST00000507559 EAF2Q96CJ1 260 aaPredicted RBP11.71□□□□□ -0.53
GNPDA1-209ENST00000507559 TRIM44Q96DX7 344 aaPredicted RBP11.71□□□□□ -0.53
GNPDA1-209ENST00000507559 UPF3BQ9BZI7 483 aaKnown RBP11.71□□□□□ -0.53
GNPDA1-209ENST00000507559 ATG3Q9NT62 314 aa11.71□□□□□ -0.53
GNPDA1-209ENST00000507559 PA2G4Q9UQ80 394 aaKnown RBP11.71□□□□□ -0.53
GNPDA1-209ENST00000507559 LETM1O95202 739 aaPredicted RBP11.7□□□□□ -0.54
GNPDA1-209ENST00000507559 KCNJ4P48050 445 aa11.7□□□□□ -0.54
GNPDA1-209ENST00000507559 NASPP49321 788 aaPredicted RBP11.7□□□□□ -0.54
GNPDA1-209ENST00000507559 NECTIN1Q15223 517 aa11.7□□□□□ -0.54
GNPDA1-209ENST00000507559 ZSCAN23Q3MJ62 389 aa11.7□□□□□ -0.54
GNPDA1-209ENST00000507559 TSGA10IPQ3SY00 556 aa11.7□□□□□ -0.54
GNPDA1-209ENST00000507559 HS1BP3Q53T59 392 aa11.7□□□□□ -0.54
GNPDA1-209ENST00000507559 PPP1R9BQ96SB3 815 aa11.7□□□□□ -0.54
GNPDA1-209ENST00000507559 FSD1Q9BTV5 496 aa11.7□□□□□ -0.54
GNPDA1-209ENST00000507559 TEX13AQ9BXU3 409 aaPredicted RBP11.7□□□□□ -0.54
GNPDA1-209ENST00000507559 PDRG1Q9NUG6 133 aa11.7□□□□□ -0.54
GNPDA1-209ENST00000507559 FBXO3Q9UK99 471 aa11.7□□□□□ -0.54
GNPDA1-209ENST00000507559 SMC3Q9UQE7 1217 aa11.7□□□□□ -0.54
GNPDA1-209ENST00000507559 NHSQ6T4R5 1651 aa11.7□□□□□ -0.54
GNPDA1-209ENST00000507559 TNS2Q63HR2 1409 aa11.69□□□□□ -0.54
GNPDA1-209ENST00000507559 MED23Q9ULK4 1368 aa11.69□□□□□ -0.54
GNPDA1-209ENST00000507559 H7C1W4 665 aa11.69□□□□□ -0.54
GNPDA1-209ENST00000507559 IL2RBP14784 551 aa11.69□□□□□ -0.54
GNPDA1-209ENST00000507559 CASTP20810 708 aaKnown RBP11.69□□□□□ -0.54
GNPDA1-209ENST00000507559 PDCP20941 246 aa11.69□□□□□ -0.54
GNPDA1-209ENST00000507559 RFX5P48382 616 aaPredicted RBP11.69□□□□□ -0.54
GNPDA1-209ENST00000507559 AK2P54819 239 aa11.69□□□□□ -0.54
GNPDA1-209ENST00000507559 EVA1CP58658 441 aa11.69□□□□□ -0.54
GNPDA1-209ENST00000507559 PKP1Q13835 747 aa11.69□□□□□ -0.54
GNPDA1-209ENST00000507559 CAVIN1Q6NZI2 390 aaKnown RBP11.69□□□□□ -0.54
GNPDA1-209ENST00000507559 RUFY3Q7L099 469 aa11.69□□□□□ -0.54
GNPDA1-209ENST00000507559 CCDC191Q8NCU4 936 aa11.69□□□□□ -0.54
GNPDA1-209ENST00000507559 CHMP4CQ96CF2 233 aa11.69□□□□□ -0.54
GNPDA1-209ENST00000507559 CWC25Q9NXE8 425 aaPredicted RBP11.69□□□□□ -0.54
GNPDA1-209ENST00000507559 USP16Q9Y5T5 823 aa11.69□□□□□ -0.54
GNPDA1-209ENST00000507559 RPAP1Q9BWH6 1393 aaPredicted RBP11.68□□□□□ -0.54
GNPDA1-209ENST00000507559 SPEF2Q9C093 1822 aa11.68□□□□□ -0.54
GNPDA1-209ENST00000507559 A0A087WZG4 1122 aa11.68□□□□□ -0.54
GNPDA1-209ENST00000507559 APBA3O96018 575 aa11.68□□□□□ -0.54
GNPDA1-209ENST00000507559 ZSCAN22P10073 491 aaPredicted RBP11.68□□□□□ -0.54
GNPDA1-209ENST00000507559 PTPN12Q05209 780 aaKnown RBP11.68□□□□□ -0.54
GNPDA1-209ENST00000507559 NMIQ13287 307 aaPredicted RBP11.68□□□□□ -0.54
GNPDA1-209ENST00000507559 LRRFIP1Q32MZ4 808 aaKnown RBP11.68□□□□□ -0.54
GNPDA1-209ENST00000507559 TNNI3KQ59H18 835 aa11.68□□□□□ -0.54
GNPDA1-209ENST00000507559 CREB3L3Q68CJ9 461 aa11.68□□□□□ -0.54
GNPDA1-209ENST00000507559 LRSAM1Q6UWE0 723 aa11.68□□□□□ -0.54
GNPDA1-209ENST00000507559 TOM1L2Q6ZVM7 507 aa11.68□□□□□ -0.54
GNPDA1-209ENST00000507559 GAS2L3Q86XJ1 694 aa11.68□□□□□ -0.54
GNPDA1-209ENST00000507559 RASEFQ8IZ41 740 aa11.68□□□□□ -0.54
GNPDA1-209ENST00000507559 JAKMIP1Q96N16 626 aaKnown RBP11.68□□□□□ -0.54
GNPDA1-209ENST00000507559 IL25Q9H293 177 aa11.68□□□□□ -0.54
GNPDA1-209ENST00000507559 THRAP3Q9Y2W1 955 aaKnown RBP11.68□□□□□ -0.54
GNPDA1-209ENST00000507559 RBM8AQ9Y5S9 174 aaKnown RBP11.68□□□□□ -0.54
GNPDA1-209ENST00000507559 U3KPZ7 1027 aaPredicted RBP11.68□□□□□ -0.54
GNPDA1-209ENST00000507559 FPGT-TNNI3KV9GXZ4 949 aa11.68□□□□□ -0.54
GNPDA1-209ENST00000507559 KCPQ6ZWJ8 1503 aa11.67□□□□□ -0.54
GNPDA1-209ENST00000507559 STX6O43752 255 aa11.67□□□□□ -0.54
GNPDA1-209ENST00000507559 CIAO1O76071 339 aa11.67□□□□□ -0.54
GNPDA1-209ENST00000507559 CLCN1P35523 988 aa11.67□□□□□ -0.54
GNPDA1-209ENST00000507559 IL15P40933 162 aaPredicted RBP11.67□□□□□ -0.54
GNPDA1-209ENST00000507559 CASP7P55210 303 aa11.67□□□□□ -0.54
GNPDA1-209ENST00000507559 USPL1Q5W0Q7 1092 aa11.67□□□□□ -0.54
GNPDA1-209ENST00000507559 PRPF40BQ6NWY9 871 aaKnown RBP11.67□□□□□ -0.54
GNPDA1-209ENST00000507559 UBE3BQ7Z3V4 1068 aa11.67□□□□□ -0.54
GNPDA1-209ENST00000507559 VSIG10Q8N0Z9 540 aa11.67□□□□□ -0.54
GNPDA1-209ENST00000507559 GPT2Q8TD30 523 aa11.67□□□□□ -0.54
GNPDA1-209ENST00000507559 HAUS7Q99871 368 aa11.67□□□□□ -0.54
GNPDA1-209ENST00000507559 PANK2Q9BZ23 570 aa11.67□□□□□ -0.54
GNPDA1-209ENST00000507559 CCDC8Q9H0W5 538 aaPredicted RBP11.67□□□□□ -0.54
GNPDA1-209ENST00000507559 SHANK3Q9BYB0 1731 aa11.66□□□□□ -0.54
GNPDA1-209ENST00000507559 BTAF1O14981 1849 aa11.66□□□□□ -0.54
GNPDA1-209ENST00000507559 SLC27A2O14975 620 aa11.66□□□□□ -0.54
GNPDA1-209ENST00000507559 PTH1RQ03431 593 aa11.66□□□□□ -0.54
GNPDA1-209ENST00000507559 TRIM28Q13263 835 aaKnown RBP11.66□□□□□ -0.54
GNPDA1-209ENST00000507559 BLOC1S2Q6QNY1 142 aa11.66□□□□□ -0.54
GNPDA1-209ENST00000507559 FAM184AQ8NB25 1140 aa11.66□□□□□ -0.54
GNPDA1-209ENST00000507559 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.66□□□□□ -0.54
GNPDA1-209ENST00000507559 SIL1Q9H173 461 aa11.66□□□□□ -0.54
GNPDA1-209ENST00000507559 PALLDQ8WX93 1383 aa11.66□□□□□ -0.54
GNPDA1-209ENST00000507559 HMGB1P09429 215 aaKnown RBP11.65□□□□□ -0.54
GNPDA1-209ENST00000507559 EPHA10Q5JZY3 1008 aa11.65□□□□□ -0.54
GNPDA1-209ENST00000507559 ARXQ96QS3 562 aa11.65□□□□□ -0.54
GNPDA1-209ENST00000507559 BOLA2Q9H3K6 86 aa11.65□□□□□ -0.54
GNPDA1-209ENST00000507559 RTN4Q9NQC3 1192 aaKnown RBP11.65□□□□□ -0.54
GNPDA1-209ENST00000507559 ABCC12Q96J65 1359 aa11.65□□□□□ -0.55
GNPDA1-209ENST00000507559 SH3TC1Q8TE82 1336 aa11.64□□□□□ -0.55
GNPDA1-209ENST00000507559 BCL9O00512 1426 aa11.64□□□□□ -0.55
GNPDA1-209ENST00000507559 ESPNB1AK53 854 aa11.64□□□□□ -0.55
GNPDA1-209ENST00000507559 F13A1P00488 732 aa11.64□□□□□ -0.55
GNPDA1-209ENST00000507559 SYT1P21579 422 aa11.64□□□□□ -0.55
GNPDA1-209ENST00000507559 RPS6KB1P23443 525 aa11.64□□□□□ -0.55
GNPDA1-209ENST00000507559 UBE2HP62256 183 aa11.64□□□□□ -0.55
GNPDA1-209ENST00000507559 TFCP2Q12800 502 aa11.64□□□□□ -0.55
GNPDA1-209ENST00000507559 NOL8Q76FK4 1167 aaKnown RBP11.64□□□□□ -0.55
GNPDA1-209ENST00000507559 PTF1AQ7RTS3 328 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms