RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-222ENST00000507459 CACNA1FO60840 1977 aa18.04■□□□□ 0.48
CCHCR1-222ENST00000507459 TAF1P21675 1872 aa18.04■□□□□ 0.48
CCHCR1-222ENST00000507459 F6X3S4 739 aa18.04■□□□□ 0.48
CCHCR1-222ENST00000507459 GRIPAP1Q4V328 841 aa18.04■□□□□ 0.48
CCHCR1-222ENST00000507459 SP8Q8IXZ3 490 aa18.04■□□□□ 0.48
CCHCR1-222ENST00000507459 CELF1Q92879 486 aaKnown RBP18.04■□□□□ 0.48
CCHCR1-222ENST00000507459 CCDC85AQ96PX6 553 aaPredicted RBP18.04■□□□□ 0.48
CCHCR1-222ENST00000507459 PSMD1Q99460 953 aa18.04■□□□□ 0.48
CCHCR1-222ENST00000507459 DICER1Q9UPY3 1922 aaKnown RBP18.04■□□□□ 0.48
CCHCR1-222ENST00000507459 PDE8AO60658 829 aa18.03■□□□□ 0.48
CCHCR1-222ENST00000507459 C16orf71Q8IYS4 520 aaPredicted RBP18.03■□□□□ 0.48
CCHCR1-222ENST00000507459 UBE3BQ7Z3V4 1068 aa18.02■□□□□ 0.48
CCHCR1-222ENST00000507459 SNED1Q8TER0 1413 aa18.02■□□□□ 0.48
CCHCR1-222ENST00000507459 SEC31BQ9NQW1 1179 aa18.02■□□□□ 0.48
CCHCR1-222ENST00000507459 CDHR2Q9BYE9 1310 aa18.01■□□□□ 0.47
CCHCR1-222ENST00000507459 DDNO94850 711 aaPredicted RBP18.01■□□□□ 0.47
CCHCR1-222ENST00000507459 GCKRQ14397 625 aa18.01■□□□□ 0.47
CCHCR1-222ENST00000507459 CCDC152Q4G0S7 254 aa18.01■□□□□ 0.47
CCHCR1-222ENST00000507459 DPP8Q6V1X1 898 aaPredicted RBP18.01■□□□□ 0.47
CCHCR1-222ENST00000507459 MPNDQ8N594 471 aa18.01■□□□□ 0.47
CCHCR1-222ENST00000507459 LINS1Q8NG48 757 aa18.01■□□□□ 0.47
CCHCR1-222ENST00000507459 JDP2Q8WYK2 163 aa18.01■□□□□ 0.47
CCHCR1-222ENST00000507459 H7C1W4 665 aa18■□□□□ 0.47
CCHCR1-222ENST00000507459 TOMM70O94826 608 aa18■□□□□ 0.47
CCHCR1-222ENST00000507459 RPS8P62241 208 aaKnown RBP18■□□□□ 0.47
CCHCR1-222ENST00000507459 SLC4A10Q6U841 1118 aa18■□□□□ 0.47
CCHCR1-222ENST00000507459 TMC4Q7Z404 712 aa18■□□□□ 0.47
CCHCR1-222ENST00000507459 LARGE2Q8N3Y3 721 aa18■□□□□ 0.47
CCHCR1-222ENST00000507459 PPIP5K2O43314 1243 aa17.99■□□□□ 0.47
CCHCR1-222ENST00000507459 VEGFAP15692 232 aaPredicted RBP17.99■□□□□ 0.47
CCHCR1-222ENST00000507459 TRMT2AQ8IZ69 625 aaKnown RBP17.99■□□□□ 0.47
CCHCR1-222ENST00000507459 MRPL50Q8N5N7 158 aaKnown RBP17.99■□□□□ 0.47
CCHCR1-222ENST00000507459 BCL2L13Q9BXK5 485 aa17.99■□□□□ 0.47
CCHCR1-222ENST00000507459 ZNF541Q9H0D2 1346 aa17.98■□□□□ 0.47
CCHCR1-222ENST00000507459 CTSWP56202 376 aa17.98■□□□□ 0.47
CCHCR1-222ENST00000507459 AOC3Q16853 763 aa17.98■□□□□ 0.47
CCHCR1-222ENST00000507459 BEND3Q5T5X7 828 aa17.98■□□□□ 0.47
CCHCR1-222ENST00000507459 SUPT20HQ8NEM7 779 aa17.98■□□□□ 0.47
CCHCR1-222ENST00000507459 SSH1Q8WYL5 1049 aa17.98■□□□□ 0.47
CCHCR1-222ENST00000507459 NSFL1CQ9UNZ2 370 aaKnown RBP17.98■□□□□ 0.47
CCHCR1-222ENST00000507459 COL4A1P02462 1669 aa17.97■□□□□ 0.47
CCHCR1-222ENST00000507459 TTLL11Q8NHH1 800 aa17.97■□□□□ 0.47
CCHCR1-222ENST00000507459 RTFDC1Q9BY42 306 aaPredicted RBP17.97■□□□□ 0.47
CCHCR1-222ENST00000507459 FZD9O00144 591 aa17.96■□□□□ 0.47
CCHCR1-222ENST00000507459 EIF6P56537 245 aaKnown RBP17.96■□□□□ 0.47
CCHCR1-222ENST00000507459 HNRNPUQ00839 825 aaKnown RBP eCLIP17.96■□□□□ 0.47
CCHCR1-222ENST00000507459 NIM1KQ8IY84 436 aa17.96■□□□□ 0.47
CCHCR1-222ENST00000507459 GREM2Q9H772 168 aa17.96■□□□□ 0.47
CCHCR1-222ENST00000507459 POTECB2RU33 542 aa17.95■□□□□ 0.46
CCHCR1-222ENST00000507459 CASP7P55210 303 aa17.95■□□□□ 0.46
CCHCR1-222ENST00000507459 GPSM2P81274 684 aa17.95■□□□□ 0.46
CCHCR1-222ENST00000507459 ANKRD18AQ8IVF6 992 aa17.95■□□□□ 0.46
CCHCR1-222ENST00000507459 SMC4Q9NTJ3 1288 aa17.95■□□□□ 0.46
CCHCR1-222ENST00000507459 GJA3Q9Y6H8 435 aa17.95■□□□□ 0.46
CCHCR1-222ENST00000507459 COL4A5P29400 1685 aa17.95■□□□□ 0.46
CCHCR1-222ENST00000507459 C6orf229H3BNL8 230 aa17.94■□□□□ 0.46
CCHCR1-222ENST00000507459 RBM46Q8TBY0 533 aaKnown RBP17.94■□□□□ 0.46
CCHCR1-222ENST00000507459 CDC5LQ99459 802 aaKnown RBP17.94■□□□□ 0.46
CCHCR1-222ENST00000507459 SRCIN1Q9C0H9 1055 aa17.94■□□□□ 0.46
CCHCR1-222ENST00000507459 VPS33BQ9H267 617 aa17.94■□□□□ 0.46
CCHCR1-222ENST00000507459 WDR90Q96KV7 1748 aa17.93■□□□□ 0.46
CCHCR1-222ENST00000507459 RIMBP2O15034 1052 aa17.93■□□□□ 0.46
CCHCR1-222ENST00000507459 ALDH1L2Q3SY69 923 aa17.93■□□□□ 0.46
CCHCR1-222ENST00000507459 PLA2G12BQ9BX93 195 aa17.93■□□□□ 0.46
CCHCR1-222ENST00000507459 C9orf78Q9NZ63 289 aaPredicted RBP17.93■□□□□ 0.46
CCHCR1-222ENST00000507459 ANKIB1Q9P2G1 1089 aa17.93■□□□□ 0.46
CCHCR1-222ENST00000507459 POLLQ9UGP5 575 aa17.93■□□□□ 0.46
CCHCR1-222ENST00000507459 GRM8O00222 908 aa17.92■□□□□ 0.46
CCHCR1-222ENST00000507459 ALDH1L1O75891 902 aa17.92■□□□□ 0.46
CCHCR1-222ENST00000507459 KIAA2012Q0VF49 1180 aa17.92■□□□□ 0.46
CCHCR1-222ENST00000507459 WASHC4Q2M389 1173 aa17.92■□□□□ 0.46
CCHCR1-222ENST00000507459 PTPRCP08575 1304 aa17.92■□□□□ 0.46
CCHCR1-222ENST00000507459 MYH3P11055 1940 aa17.92■□□□□ 0.46
CCHCR1-222ENST00000507459 IQCA1LA6NCM1 817 aa17.91■□□□□ 0.46
CCHCR1-222ENST00000507459 CT47B1P0C2W7 299 aaPredicted RBP17.91■□□□□ 0.46
CCHCR1-222ENST00000507459 FAM161AQ3B820 660 aa17.91■□□□□ 0.46
CCHCR1-222ENST00000507459 GPC2Q8N158 579 aa17.91■□□□□ 0.46
CCHCR1-222ENST00000507459 L3MBTL3Q96JM7 780 aaPredicted RBP17.91■□□□□ 0.46
CCHCR1-222ENST00000507459 GPR101Q96P66 508 aaPredicted RBP17.91■□□□□ 0.46
CCHCR1-222ENST00000507459 ZNRF3Q9ULT6 936 aa17.91■□□□□ 0.46
CCHCR1-222ENST00000507459 CHMP3Q9Y3E7 222 aa17.91■□□□□ 0.46
CCHCR1-222ENST00000507459 LRRC37AA6NMS7 1700 aa17.91■□□□□ 0.46
CCHCR1-222ENST00000507459 CSF1RP07333 972 aa17.9■□□□□ 0.46
CCHCR1-222ENST00000507459 HSPA6P17066 643 aa17.9■□□□□ 0.46
CCHCR1-222ENST00000507459 ITGA6P23229 1130 aa17.9■□□□□ 0.46
CCHCR1-222ENST00000507459 SMC1BQ8NDV3 1235 aa17.9■□□□□ 0.46
CCHCR1-222ENST00000507459 TBC1D16Q8TBP0 767 aa17.9■□□□□ 0.46
CCHCR1-222ENST00000507459 DUOX1Q9NRD9 1551 aa17.89■□□□□ 0.45
CCHCR1-222ENST00000507459 UFL1O94874 794 aa17.89■□□□□ 0.45
CCHCR1-222ENST00000507459 IGHMBP2P38935 993 aaKnown RBP17.89■□□□□ 0.45
CCHCR1-222ENST00000507459 FOXO4P98177 505 aa17.89■□□□□ 0.45
CCHCR1-222ENST00000507459 CXCL9Q07325 125 aa17.89■□□□□ 0.45
CCHCR1-222ENST00000507459 FSTL1Q12841 308 aa17.89■□□□□ 0.45
CCHCR1-222ENST00000507459 EYA3Q99504 573 aa17.89■□□□□ 0.45
CCHCR1-222ENST00000507459 TAF1DQ9H5J8 278 aaPredicted RBP17.89■□□□□ 0.45
CCHCR1-222ENST00000507459 BSDC1Q9NW68 430 aaPredicted RBP17.89■□□□□ 0.45
CCHCR1-222ENST00000507459 HACL1Q9UJ83 578 aa17.89■□□□□ 0.45
CCHCR1-222ENST00000507459 GGA1Q9UJY5 639 aa17.89■□□□□ 0.45
CCHCR1-222ENST00000507459 RTL9Q8NET4 1388 aa17.89■□□□□ 0.45
CCHCR1-222ENST00000507459 RAD17O75943 681 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms