RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 GCKRQ14397 625 aa25.21■■□□□ 1.63
SNX25-204ENST00000506896 BEND3Q5T5X7 828 aa25.21■■□□□ 1.63
SNX25-204ENST00000506896 DDX60Q8IY21 1712 aaKnown RBP25.2■■□□□ 1.63
SNX25-204ENST00000506896 RTL5Q5HYW3 569 aaPredicted RBP25.2■■□□□ 1.62
SNX25-204ENST00000506896 CC2D2BQ6DHV5 1058 aa25.2■■□□□ 1.62
SNX25-204ENST00000506896 KIF16BQ96L93 1317 aa25.19■■□□□ 1.62
SNX25-204ENST00000506896 SF3B3Q15393 1217 aaKnown RBP25.19■■□□□ 1.62
SNX25-204ENST00000506896 SLC4A10Q6U841 1118 aa25.18■■□□□ 1.62
SNX25-204ENST00000506896 RRAGCQ9HB90 399 aa25.18■■□□□ 1.62
SNX25-204ENST00000506896 H7C1W4 665 aa25.17■■□□□ 1.62
SNX25-204ENST00000506896 PDE8AO60658 829 aa25.17■■□□□ 1.62
SNX25-204ENST00000506896 ALDH1L1O75891 902 aa25.17■■□□□ 1.62
SNX25-204ENST00000506896 PSMD1Q99460 953 aa25.17■■□□□ 1.62
SNX25-204ENST00000506896 SRCIN1Q9C0H9 1055 aa25.17■■□□□ 1.62
SNX25-204ENST00000506896 ABCC4O15439 1325 aa25.16■■□□□ 1.62
SNX25-204ENST00000506896 TOMM70O94826 608 aa25.16■■□□□ 1.62
SNX25-204ENST00000506896 TAF1P21675 1872 aa25.16■■□□□ 1.62
SNX25-204ENST00000506896 GRIPAP1Q4V328 841 aa25.16■■□□□ 1.62
SNX25-204ENST00000506896 DDX46Q7L014 1031 aaKnown RBP25.16■■□□□ 1.62
SNX25-204ENST00000506896 NOB1Q9ULX3 412 aaKnown RBP25.16■■□□□ 1.62
SNX25-204ENST00000506896 PPEF1O14829 653 aaPredicted RBP25.15■■□□□ 1.62
SNX25-204ENST00000506896 UBE3BQ7Z3V4 1068 aa25.15■■□□□ 1.62
SNX25-204ENST00000506896 SLC51AQ86UW1 340 aa25.15■■□□□ 1.62
SNX25-204ENST00000506896 ARHGAP45Q92619 1136 aa25.15■■□□□ 1.62
SNX25-204ENST00000506896 API5Q9BZZ5 524 aaKnown RBP25.15■■□□□ 1.62
SNX25-204ENST00000506896 ZNF277Q9NRM2 450 aaPredicted RBP25.15■■□□□ 1.62
SNX25-204ENST00000506896 BBOX1O75936 387 aa25.14■■□□□ 1.62
SNX25-204ENST00000506896 DPY19L2Q6NUT2 758 aa25.14■■□□□ 1.62
SNX25-204ENST00000506896 ATP6V0A2Q9Y487 856 aa25.14■■□□□ 1.62
SNX25-204ENST00000506896 POTECB2RU33 542 aa25.13■■□□□ 1.61
SNX25-204ENST00000506896 IPO8O15397 1037 aaKnown RBP25.13■■□□□ 1.61
SNX25-204ENST00000506896 CCDC152Q4G0S7 254 aa25.13■■□□□ 1.61
SNX25-204ENST00000506896 JARID2Q92833 1246 aaPredicted RBP25.13■■□□□ 1.61
SNX25-204ENST00000506896 WDR90Q96KV7 1748 aa25.12■■□□□ 1.61
SNX25-204ENST00000506896 IARSP41252 1262 aaKnown RBP25.12■■□□□ 1.61
SNX25-204ENST00000506896 GRAPQ13588 217 aa25.12■■□□□ 1.61
SNX25-204ENST00000506896 GRAPLQ8TC17 118 aaPredicted RBP25.12■■□□□ 1.61
SNX25-204ENST00000506896 PLA2G12BQ9BX93 195 aa25.12■■□□□ 1.61
SNX25-204ENST00000506896 TMX4Q9H1E5 349 aaPredicted RBP25.12■■□□□ 1.61
SNX25-204ENST00000506896 GRM8O00222 908 aa25.11■■□□□ 1.61
SNX25-204ENST00000506896 CASP7P55210 303 aa25.11■■□□□ 1.61
SNX25-204ENST00000506896 CTSWP56202 376 aa25.11■■□□□ 1.61
SNX25-204ENST00000506896 TMC4Q7Z404 712 aa25.11■■□□□ 1.61
SNX25-204ENST00000506896 SP8Q8IXZ3 490 aa25.11■■□□□ 1.61
SNX25-204ENST00000506896 C9orf78Q9NZ63 289 aaPredicted RBP25.11■■□□□ 1.61
SNX25-204ENST00000506896 VEGFAP15692 232 aaPredicted RBP25.1■■□□□ 1.61
SNX25-204ENST00000506896 RBM46Q8TBY0 533 aaKnown RBP25.1■■□□□ 1.61
SNX25-204ENST00000506896 BCAR3O75815 825 aa25.09■■□□□ 1.61
SNX25-204ENST00000506896 CCT4P50991 539 aaKnown RBP25.09■■□□□ 1.61
SNX25-204ENST00000506896 FZD9O00144 591 aa25.08■■□□□ 1.61
SNX25-204ENST00000506896 DDNO94850 711 aaPredicted RBP25.08■■□□□ 1.61
SNX25-204ENST00000506896 MYH3P11055 1940 aa25.08■■□□□ 1.6
SNX25-204ENST00000506896 C16orf71Q8IYS4 520 aaPredicted RBP25.07■■□□□ 1.6
SNX25-204ENST00000506896 TTLL11Q8NHH1 800 aa25.07■■□□□ 1.6
SNX25-204ENST00000506896 RTFDC1Q9BY42 306 aaPredicted RBP25.07■■□□□ 1.6
SNX25-204ENST00000506896 RTL9Q8NET4 1388 aa25.06■■□□□ 1.6
SNX25-204ENST00000506896 HSPA6P17066 643 aa25.06■■□□□ 1.6
SNX25-204ENST00000506896 CEP350Q5VT06 3117 aa25.06■■□□□ 1.6
SNX25-204ENST00000506896 COL4A5P29400 1685 aa25.06■■□□□ 1.6
SNX25-204ENST00000506896 UTYO14607 1347 aa25.06■■□□□ 1.6
SNX25-204ENST00000506896 ATF7IPQ6VMQ6 1270 aa25.05■■□□□ 1.6
SNX25-204ENST00000506896 FRAT1Q92837 279 aaPredicted RBP25.05■■□□□ 1.6
SNX25-204ENST00000506896 CELF1Q92879 486 aaKnown RBP25.05■■□□□ 1.6
SNX25-204ENST00000506896 VPS33BQ9H267 617 aa25.05■■□□□ 1.6
SNX25-204ENST00000506896 COL4A1P02462 1669 aa25.04■■□□□ 1.6
SNX25-204ENST00000506896 RPS8P62241 208 aaKnown RBP25.04■■□□□ 1.6
SNX25-204ENST00000506896 ZKSCAN2Q63HK3 967 aa25.04■■□□□ 1.6
SNX25-204ENST00000506896 CDC5LQ99459 802 aaKnown RBP25.04■■□□□ 1.6
SNX25-204ENST00000506896 LRRC37AA6NMS7 1700 aa25.03■■□□□ 1.6
SNX25-204ENST00000506896 CSF1RP07333 972 aa25.03■■□□□ 1.6
SNX25-204ENST00000506896 MPNDQ8N594 471 aa25.03■■□□□ 1.6
SNX25-204ENST00000506896 JDP2Q8WYK2 163 aa25.03■■□□□ 1.6
SNX25-204ENST00000506896 L3MBTL3Q96JM7 780 aaPredicted RBP25.03■■□□□ 1.6
SNX25-204ENST00000506896 SEC31BQ9NQW1 1179 aa25.03■■□□□ 1.6
SNX25-204ENST00000506896 ZNF541Q9H0D2 1346 aa25.03■■□□□ 1.6
SNX25-204ENST00000506896 TRIM27P14373 513 aa25.02■■□□□ 1.6
SNX25-204ENST00000506896 FSTL1Q12841 308 aa25.02■■□□□ 1.6
SNX25-204ENST00000506896 CCDC85AQ96PX6 553 aaPredicted RBP25.02■■□□□ 1.6
SNX25-204ENST00000506896 GREM2Q9H772 168 aa25.02■■□□□ 1.6
SNX25-204ENST00000506896 SCN4AP35499 1836 aa25.01■■□□□ 1.59
SNX25-204ENST00000506896 NBPF7P0C2Y1 421 aaPredicted RBP25.01■■□□□ 1.59
SNX25-204ENST00000506896 FOXO4P98177 505 aa25.01■■□□□ 1.59
SNX25-204ENST00000506896 INTS3Q68E01 1043 aaKnown RBP25.01■■□□□ 1.59
SNX25-204ENST00000506896 DPP8Q6V1X1 898 aaPredicted RBP25.01■■□□□ 1.59
SNX25-204ENST00000506896 ANKRD18AQ8IVF6 992 aa25.01■■□□□ 1.59
SNX25-204ENST00000506896 LARGE2Q8N3Y3 721 aa25.01■■□□□ 1.59
SNX25-204ENST00000506896 SUPT20HQ8NEM7 779 aa25.01■■□□□ 1.59
SNX25-204ENST00000506896 YTHDC1Q96MU7 727 aaKnown RBP25.01■■□□□ 1.59
SNX25-204ENST00000506896 USP44Q9H0E7 712 aa25.01■■□□□ 1.59
SNX25-204ENST00000506896 HDAC5Q9UQL6 1122 aa24.99■■□□□ 1.59
SNX25-204ENST00000506896 PPIP5K2O43314 1243 aa24.98■■□□□ 1.59
SNX25-204ENST00000506896 ITGA6P23229 1130 aa24.98■■□□□ 1.59
SNX25-204ENST00000506896 AOC3Q16853 763 aa24.98■■□□□ 1.59
SNX25-204ENST00000506896 FAM161AQ3B820 660 aa24.98■■□□□ 1.59
SNX25-204ENST00000506896 RCAN3Q9UKA8 241 aa24.98■■□□□ 1.59
SNX25-204ENST00000506896 DUOX1Q9NRD9 1551 aa24.97■■□□□ 1.59
SNX25-204ENST00000506896 LMBR1LQ6UX01 489 aa24.97■■□□□ 1.59
SNX25-204ENST00000506896 GPC2Q8N158 579 aa24.97■■□□□ 1.59
SNX25-204ENST00000506896 SMC1BQ8NDV3 1235 aa24.97■■□□□ 1.59
SNX25-204ENST00000506896 SUCLG2Q96I99 432 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms