RNA–Protein interactions for RNA: ENST00000506827.1

ITGA3-209, Transcript of integrin subunit alpha 3, humanhuman

TSL 3

Gene ITGA3, Length 827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-209ENST00000506827 IFIT5Q13325 482 aaKnown RBP18.45■□□□□ 0.54
ITGA3-209ENST00000506827 CCDC57Q2TAC2 916 aa18.45■□□□□ 0.54
ITGA3-209ENST00000506827 EPHA10Q5JZY3 1008 aa18.45■□□□□ 0.54
ITGA3-209ENST00000506827 DDX46Q7L014 1031 aaKnown RBP18.45■□□□□ 0.54
ITGA3-209ENST00000506827 ANKRD44Q8N8A2 993 aa18.45■□□□□ 0.54
ITGA3-209ENST00000506827 RBM17Q96I25 401 aaKnown RBP18.45■□□□□ 0.54
ITGA3-209ENST00000506827 PPP1R1BQ9UD71 204 aaPredicted RBP18.45■□□□□ 0.54
ITGA3-209ENST00000506827 NRXN2Q9P2S2 1712 aa18.44■□□□□ 0.54
ITGA3-209ENST00000506827 ANKRD18BA2A2Z9 1011 aa18.44■□□□□ 0.54
ITGA3-209ENST00000506827 ALDH1B1P30837 517 aa18.44■□□□□ 0.54
ITGA3-209ENST00000506827 HOXA10P31260 410 aaPredicted RBP18.44■□□□□ 0.54
ITGA3-209ENST00000506827 MASTLQ96GX5 879 aa18.44■□□□□ 0.54
ITGA3-209ENST00000506827 CDC5LQ99459 802 aaKnown RBP18.44■□□□□ 0.54
ITGA3-209ENST00000506827 C1orf115Q9H7X2 142 aa18.44■□□□□ 0.54
ITGA3-209ENST00000506827 CHMP3Q9Y3E7 222 aa18.44■□□□□ 0.54
ITGA3-209ENST00000506827 AFDNP55196 1824 aaKnown RBP18.44■□□□□ 0.54
ITGA3-209ENST00000506827 SRGAP3O43295 1099 aa18.43■□□□□ 0.54
ITGA3-209ENST00000506827 SRGNP10124 158 aa18.43■□□□□ 0.54
ITGA3-209ENST00000506827 STYK1Q6J9G0 422 aa18.43■□□□□ 0.54
ITGA3-209ENST00000506827 CEP85Q6P2H3 762 aa18.43■□□□□ 0.54
ITGA3-209ENST00000506827 C2CD5Q86YS7 1000 aa18.43■□□□□ 0.54
ITGA3-209ENST00000506827 CRAMP1Q96RY5 1269 aa18.43■□□□□ 0.54
ITGA3-209ENST00000506827 GREM2Q9H772 168 aa18.42■□□□□ 0.54
ITGA3-209ENST00000506827 BBOX1O75936 387 aa18.41■□□□□ 0.54
ITGA3-209ENST00000506827 ITGA6P23229 1130 aa18.41■□□□□ 0.54
ITGA3-209ENST00000506827 TAF7LQ5H9L4 462 aa18.41■□□□□ 0.54
ITGA3-209ENST00000506827 C3orf67Q6ZVT6 689 aa18.41■□□□□ 0.54
ITGA3-209ENST00000506827 TMC4Q7Z404 712 aa18.41■□□□□ 0.54
ITGA3-209ENST00000506827 SSH3Q8TE77 659 aa18.41■□□□□ 0.54
ITGA3-209ENST00000506827 CNKSR1Q969H4 720 aa18.41■□□□□ 0.54
ITGA3-209ENST00000506827 FBXO3Q9UK99 471 aa18.41■□□□□ 0.54
ITGA3-209ENST00000506827 IGHMBP2P38935 993 aaKnown RBP18.4■□□□□ 0.54
ITGA3-209ENST00000506827 POLA2Q14181 598 aa18.4■□□□□ 0.54
ITGA3-209ENST00000506827 FAM161AQ3B820 660 aa18.4■□□□□ 0.54
ITGA3-209ENST00000506827 RWDD1Q9H446 243 aaPredicted RBP18.4■□□□□ 0.54
ITGA3-209ENST00000506827 RPS8P62241 208 aaKnown RBP18.39■□□□□ 0.53
ITGA3-209ENST00000506827 GRAPQ13588 217 aa18.39■□□□□ 0.53
ITGA3-209ENST00000506827 ANKRD18AQ8IVF6 992 aa18.39■□□□□ 0.53
ITGA3-209ENST00000506827 KLHL34Q8N239 644 aa18.39■□□□□ 0.53
ITGA3-209ENST00000506827 GRAPLQ8TC17 118 aaPredicted RBP18.39■□□□□ 0.53
ITGA3-209ENST00000506827 CCDC85AQ96PX6 553 aaPredicted RBP18.39■□□□□ 0.53
ITGA3-209ENST00000506827 COPRSQ9NQ92 184 aa18.39■□□□□ 0.53
ITGA3-209ENST00000506827 PCDHB15Q9Y5E8 787 aa18.39■□□□□ 0.53
ITGA3-209ENST00000506827 HDAC1Q13547 482 aaPredicted RBP18.38■□□□□ 0.53
ITGA3-209ENST00000506827 HSP90AB4PQ58FF6 505 aa18.38■□□□□ 0.53
ITGA3-209ENST00000506827 ZNF622Q969S3 477 aaKnown RBP eCLIP18.38■□□□□ 0.53
ITGA3-209ENST00000506827 MPHOSPH8Q99549 860 aa18.38■□□□□ 0.53
ITGA3-209ENST00000506827 TMX4Q9H1E5 349 aaPredicted RBP18.38■□□□□ 0.53
ITGA3-209ENST00000506827 PIM2Q9P1W9 311 aa18.38■□□□□ 0.53
ITGA3-209ENST00000506827 PNMA6EA0A0J9YXQ4 647 aa18.37■□□□□ 0.53
ITGA3-209ENST00000506827 DPEP1P16444 411 aa18.37■□□□□ 0.53
ITGA3-209ENST00000506827 SEC31BQ9NQW1 1179 aa18.37■□□□□ 0.53
ITGA3-209ENST00000506827 BSDC1Q9NW68 430 aaPredicted RBP18.37■□□□□ 0.53
ITGA3-209ENST00000506827 A0A0G2JLW4 131 aa18.36■□□□□ 0.53
ITGA3-209ENST00000506827 CHRNA5P30532 468 aa18.36■□□□□ 0.53
ITGA3-209ENST00000506827 RFX5P48382 616 aaPredicted RBP18.36■□□□□ 0.53
ITGA3-209ENST00000506827 PTPN12Q05209 780 aaKnown RBP18.36■□□□□ 0.53
ITGA3-209ENST00000506827 LDHAL6AQ6ZMR3 332 aa18.36■□□□□ 0.53
ITGA3-209ENST00000506827 SIRT2Q8IXJ6 389 aa18.36■□□□□ 0.53
ITGA3-209ENST00000506827 TTLL6Q8N841 843 aa18.36■□□□□ 0.53
ITGA3-209ENST00000506827 FHDC1Q9C0D6 1143 aaPredicted RBP18.36■□□□□ 0.53
ITGA3-209ENST00000506827 CIAO1O76071 339 aa18.35■□□□□ 0.53
ITGA3-209ENST00000506827 G3BP1Q13283 466 aaKnown RBP eCLIP18.35■□□□□ 0.53
ITGA3-209ENST00000506827 GRIPAP1Q4V328 841 aa18.35■□□□□ 0.53
ITGA3-209ENST00000506827 CC2D2BQ6DHV5 1058 aa18.35■□□□□ 0.53
ITGA3-209ENST00000506827 SYT17Q9BSW7 474 aa18.35■□□□□ 0.53
ITGA3-209ENST00000506827 NOP58Q9Y2X3 529 aaKnown RBP18.35■□□□□ 0.53
ITGA3-209ENST00000506827 SURF6O75683 361 aaKnown RBP18.34■□□□□ 0.53
ITGA3-209ENST00000506827 KCNA3P22001 575 aa18.34■□□□□ 0.53
ITGA3-209ENST00000506827 ERC1Q8IUD2 1116 aa18.34■□□□□ 0.53
ITGA3-209ENST00000506827 CELF1Q92879 486 aaKnown RBP18.34■□□□□ 0.53
ITGA3-209ENST00000506827 CNNM1Q9NRU3 951 aa18.34■□□□□ 0.53
ITGA3-209ENST00000506827 PPP4R2Q9NY27 417 aa18.34■□□□□ 0.53
ITGA3-209ENST00000506827 LAMB2P55268 1798 aa18.34■□□□□ 0.53
ITGA3-209ENST00000506827 DDX60Q8IY21 1712 aaKnown RBP18.34■□□□□ 0.53
ITGA3-209ENST00000506827 EYA2O00167 538 aa18.33■□□□□ 0.52
ITGA3-209ENST00000506827 PPEF1O14829 653 aaPredicted RBP18.33■□□□□ 0.52
ITGA3-209ENST00000506827 RAB11FIP3O75154 756 aa18.33■□□□□ 0.52
ITGA3-209ENST00000506827 IL15P40933 162 aaPredicted RBP18.33■□□□□ 0.52
ITGA3-209ENST00000506827 DALRD3Q5D0E6 543 aaKnown RBP18.33■□□□□ 0.52
ITGA3-209ENST00000506827 SOGA3Q5TF21 947 aa18.33■□□□□ 0.52
ITGA3-209ENST00000506827 SP8Q8IXZ3 490 aa18.33■□□□□ 0.52
ITGA3-209ENST00000506827 GCC1Q96CN9 775 aa18.33■□□□□ 0.52
ITGA3-209ENST00000506827 DCTPP1Q9H773 170 aa18.33■□□□□ 0.52
ITGA3-209ENST00000506827 MROH5Q6ZUA9 1318 aa18.32■□□□□ 0.52
ITGA3-209ENST00000506827 PRPF40BQ6NWY9 871 aaKnown RBP18.32■□□□□ 0.52
ITGA3-209ENST00000506827 ZNF594Q96JF6 807 aaPredicted RBP18.32■□□□□ 0.52
ITGA3-209ENST00000506827 ANKRD2Q9GZV1 360 aa18.32■□□□□ 0.52
ITGA3-209ENST00000506827 ATP6V0A2Q9Y487 856 aa18.32■□□□□ 0.52
ITGA3-209ENST00000506827 OS9Q13438 667 aaPredicted RBP18.31■□□□□ 0.52
ITGA3-209ENST00000506827 CCDC136Q96JN2 1154 aa18.31■□□□□ 0.52
ITGA3-209ENST00000506827 RIPOR2Q9Y4F9 1068 aa18.31■□□□□ 0.52
ITGA3-209ENST00000506827 TNRC6CQ9HCJ0 1690 aaKnown RBP18.31■□□□□ 0.52
ITGA3-209ENST00000506827 KLHDC4Q8TBB5 520 aa18.3■□□□□ 0.52
ITGA3-209ENST00000506827 PA2G4Q9UQ80 394 aaKnown RBP18.3■□□□□ 0.52
ITGA3-209ENST00000506827 KIF13BQ9NQT8 1826 aa18.29■□□□□ 0.52
ITGA3-209ENST00000506827 NLGN2Q8NFZ4 835 aa18.29■□□□□ 0.52
ITGA3-209ENST00000506827 SIL1Q9H173 461 aa18.29■□□□□ 0.52
ITGA3-209ENST00000506827 CEP126Q9P2H0 1117 aa18.29■□□□□ 0.52
ITGA3-209ENST00000506827 ZBTB47Q9UFB7 747 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms