RNA–Protein interactions for RNA: ENST00000506590.1

CXCL13-202, Transcript of C-X-C motif chemokine ligand 13, humanhuman

TSL 2

Gene CXCL13, Length 540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13-202ENST00000506590 DNAAF2Q9NVR5 837 aaKnown RBP6.34□□□□□ -1.39
CXCL13-202ENST00000506590 C1orf167Q5SNV9 1468 aa6.34□□□□□ -1.4
CXCL13-202ENST00000506590 PIK3C2GO75747 1445 aa6.33□□□□□ -1.4
CXCL13-202ENST00000506590 XRN1Q8IZH2 1706 aaKnown RBP6.33□□□□□ -1.4
CXCL13-202ENST00000506590 NPHP3Q7Z494 1330 aa6.33□□□□□ -1.4
CXCL13-202ENST00000506590 FIGNL2A6NMB9 653 aa6.33□□□□□ -1.4
CXCL13-202ENST00000506590 SFI1A8K8P3 1242 aa6.33□□□□□ -1.4
CXCL13-202ENST00000506590 POTECB2RU33 542 aa6.33□□□□□ -1.4
CXCL13-202ENST00000506590 TMEM229AB2RXF0 380 aa6.33□□□□□ -1.4
CXCL13-202ENST00000506590 USP17L15C9J2P7 530 aa6.33□□□□□ -1.4
CXCL13-202ENST00000506590 USP17L10C9JJH3 530 aa6.33□□□□□ -1.4
CXCL13-202ENST00000506590 USP17L13C9JLJ4 530 aa6.33□□□□□ -1.4
CXCL13-202ENST00000506590 USP17L12C9JPN9 530 aa6.33□□□□□ -1.4
CXCL13-202ENST00000506590 USP17L11C9JVI0 530 aa6.33□□□□□ -1.4
CXCL13-202ENST00000506590 USP17L21D6R901 530 aa6.33□□□□□ -1.4
CXCL13-202ENST00000506590 USP17L18D6R9N7 530 aa6.33□□□□□ -1.4
CXCL13-202ENST00000506590 USP17L22D6RA61 530 aa6.33□□□□□ -1.4
CXCL13-202ENST00000506590 USP17L17D6RBQ6 530 aa6.33□□□□□ -1.4
CXCL13-202ENST00000506590 USP17L19D6RCP7 530 aa6.33□□□□□ -1.4
CXCL13-202ENST00000506590 USP17L20D6RJB6 530 aa6.33□□□□□ -1.4
CXCL13-202ENST00000506590 CTSOP43234 321 aaPredicted RBP6.33□□□□□ -1.4
CXCL13-202ENST00000506590 SMCPP49901 116 aaPredicted RBP6.33□□□□□ -1.4
CXCL13-202ENST00000506590 GDF10P55107 478 aa6.33□□□□□ -1.4
CXCL13-202ENST00000506590 USP17L24Q0WX57 530 aa6.33□□□□□ -1.4
CXCL13-202ENST00000506590 CTC1Q2NKJ3 1217 aa6.33□□□□□ -1.4
CXCL13-202ENST00000506590 CCDC102BQ68D86 513 aa6.33□□□□□ -1.4
CXCL13-202ENST00000506590 PRAM1Q96QH2 718 aa6.33□□□□□ -1.4
CXCL13-202ENST00000506590 RGS17Q9UGC6 210 aaPredicted RBP6.33□□□□□ -1.4
CXCL13-202ENST00000506590 TRAK1Q9UPV9 953 aa6.33□□□□□ -1.4
CXCL13-202ENST00000506590 ASXL1Q8IXJ9 1541 aa6.33□□□□□ -1.4
CXCL13-202ENST00000506590 PHLPP1O60346 1717 aa6.33□□□□□ -1.4
CXCL13-202ENST00000506590 YTHDC2Q9H6S0 1430 aaKnown RBP6.33□□□□□ -1.4
CXCL13-202ENST00000506590 FOXO3O43524 673 aa6.32□□□□□ -1.4
CXCL13-202ENST00000506590 IL2RAP01589 272 aa6.32□□□□□ -1.4
CXCL13-202ENST00000506590 RBM25P49756 843 aaKnown RBP6.32□□□□□ -1.4
CXCL13-202ENST00000506590 SCNN1DP51172 638 aa6.32□□□□□ -1.4
CXCL13-202ENST00000506590 DPYDQ12882 1025 aa6.32□□□□□ -1.4
CXCL13-202ENST00000506590 PTK7Q13308 1070 aa6.32□□□□□ -1.4
CXCL13-202ENST00000506590 LARP1Q6PKG0 1096 aaKnown RBP6.32□□□□□ -1.4
CXCL13-202ENST00000506590 POTEAQ6S8J7 498 aa6.32□□□□□ -1.4
CXCL13-202ENST00000506590 CCDC125Q86Z20 511 aa6.32□□□□□ -1.4
CXCL13-202ENST00000506590 PBXIP1Q96AQ6 731 aa6.32□□□□□ -1.4
CXCL13-202ENST00000506590 PUS7Q96PZ0 661 aaKnown RBP6.32□□□□□ -1.4
CXCL13-202ENST00000506590 TSEN34Q9BSV6 310 aaKnown RBP6.32□□□□□ -1.4
CXCL13-202ENST00000506590 CHMP4AQ9BY43 222 aa6.32□□□□□ -1.4
CXCL13-202ENST00000506590 POLMQ9NP87 494 aaPredicted RBP6.32□□□□□ -1.4
CXCL13-202ENST00000506590 GMPR2Q9P2T1 348 aaKnown RBP6.32□□□□□ -1.4
CXCL13-202ENST00000506590 TECPR2O15040 1411 aa6.32□□□□□ -1.4
CXCL13-202ENST00000506590 PRAG1Q86YV5 1406 aa6.32□□□□□ -1.4
CXCL13-202ENST00000506590 MYOM2P54296 1465 aa6.31□□□□□ -1.4
CXCL13-202ENST00000506590 LZTS3O60299 673 aaPredicted RBP6.31□□□□□ -1.4
CXCL13-202ENST00000506590 UPP2O95045 317 aa6.31□□□□□ -1.4
CXCL13-202ENST00000506590 ADAMTS2O95450 1211 aa6.31□□□□□ -1.4
CXCL13-202ENST00000506590 XPCQ01831 940 aaPredicted RBP6.31□□□□□ -1.4
CXCL13-202ENST00000506590 SCARF1Q14162 830 aa6.31□□□□□ -1.4
CXCL13-202ENST00000506590 TRIM50Q86XT4 487 aa6.31□□□□□ -1.4
CXCL13-202ENST00000506590 CRIPAKQ8N1N5 446 aa6.31□□□□□ -1.4
CXCL13-202ENST00000506590 STK32AQ8WU08 396 aa6.31□□□□□ -1.4
CXCL13-202ENST00000506590 CNKSR1Q969H4 720 aa6.31□□□□□ -1.4
CXCL13-202ENST00000506590 NGLY1Q96IV0 654 aa6.31□□□□□ -1.4
CXCL13-202ENST00000506590 C8orf37Q96NL8 207 aa6.31□□□□□ -1.4
CXCL13-202ENST00000506590 ZNF358Q9NW07 568 aa6.31□□□□□ -1.4
CXCL13-202ENST00000506590 ZMIZ1Q9ULJ6 1067 aa6.31□□□□□ -1.4
CXCL13-202ENST00000506590 AHDC1Q5TGY3 1603 aaPredicted RBP6.31□□□□□ -1.4
CXCL13-202ENST00000506590 PPLO60437 1756 aa6.31□□□□□ -1.4
CXCL13-202ENST00000506590 PLEKHH1Q9ULM0 1364 aa6.31□□□□□ -1.4
CXCL13-202ENST00000506590 SOS2Q07890 1332 aaPredicted RBP6.3□□□□□ -1.4
CXCL13-202ENST00000506590 DKK1O94907 266 aa6.3□□□□□ -1.4
CXCL13-202ENST00000506590 GNRH1P01148 92 aa6.3□□□□□ -1.4
CXCL13-202ENST00000506590 RXRBP28702 533 aa6.3□□□□□ -1.4
CXCL13-202ENST00000506590 ATP1A2P50993 1020 aa6.3□□□□□ -1.4
CXCL13-202ENST00000506590 NEUROD1Q13562 356 aa6.3□□□□□ -1.4
CXCL13-202ENST00000506590 TBCELQ5QJ74 424 aa6.3□□□□□ -1.4
CXCL13-202ENST00000506590 FOXD4L5Q5VV16 416 aaPredicted RBP6.3□□□□□ -1.4
CXCL13-202ENST00000506590 KRT28Q7Z3Y7 464 aa6.3□□□□□ -1.4
CXCL13-202ENST00000506590 AEBP1Q8IUX7 1158 aa6.3□□□□□ -1.4
CXCL13-202ENST00000506590 TNS4Q8IZW8 715 aa6.3□□□□□ -1.4
CXCL13-202ENST00000506590 TSEN2Q8NCE0 465 aaKnown RBP6.3□□□□□ -1.4
CXCL13-202ENST00000506590 HIRIP3Q9BW71 556 aaPredicted RBP6.3□□□□□ -1.4
CXCL13-202ENST00000506590 NOVA2Q9UNW9 492 aaKnown RBP6.3□□□□□ -1.4
CXCL13-202ENST00000506590 MTMR7Q9Y216 660 aa6.3□□□□□ -1.4
CXCL13-202ENST00000506590 AFF2P51816 1311 aa6.29□□□□□ -1.4
CXCL13-202ENST00000506590 NRXN1Q9ULB1 1477 aa6.29□□□□□ -1.4
CXCL13-202ENST00000506590 COL16A1Q07092 1604 aaPredicted RBP6.29□□□□□ -1.4
CXCL13-202ENST00000506590 SPINT1O43278 529 aa6.29□□□□□ -1.4
CXCL13-202ENST00000506590 CENPCQ03188 943 aa6.29□□□□□ -1.4
CXCL13-202ENST00000506590 TMCO4Q5TGY1 634 aa6.29□□□□□ -1.4
CXCL13-202ENST00000506590 ANKMY2Q8IV38 441 aa6.29□□□□□ -1.4
CXCL13-202ENST00000506590 RGS22Q8NE09 1264 aa6.29□□□□□ -1.4
CXCL13-202ENST00000506590 NLRP3Q96P20 1036 aa6.29□□□□□ -1.4
CXCL13-202ENST00000506590 USP3Q9Y6I4 520 aa6.29□□□□□ -1.4
CXCL13-202ENST00000506590 EIF3AQ14152 1382 aaKnown RBP6.29□□□□□ -1.4
CXCL13-202ENST00000506590 PNPLA6Q8IY17 1366 aa6.29□□□□□ -1.4
CXCL13-202ENST00000506590 FAM196BA6NMK8 535 aa6.28□□□□□ -1.4
CXCL13-202ENST00000506590 INHAP05111 366 aa6.28□□□□□ -1.4
CXCL13-202ENST00000506590 SNRPBP14678 240 aaKnown RBP6.28□□□□□ -1.4
CXCL13-202ENST00000506590 RHOQP17081 205 aa6.28□□□□□ -1.4
CXCL13-202ENST00000506590 CLN3Q13286 438 aa6.28□□□□□ -1.4
CXCL13-202ENST00000506590 PRICKLE2Q7Z3G6 844 aa6.28□□□□□ -1.4
CXCL13-202ENST00000506590 LARGE2Q8N3Y3 721 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms