RNA–Protein interactions for RNA: ENST00000506400.1

TRIM23-205, Transcript of tripartite motif containing 23, humanhuman

TSL 4

Gene TRIM23, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-205ENST00000506400 ANKRD44Q8N8A2 993 aa13.99□□□□□ -0.17
TRIM23-205ENST00000506400 RPGRQ92834 1020 aaKnown RBP13.99□□□□□ -0.17
TRIM23-205ENST00000506400 C1orf115Q9H7X2 142 aa13.99□□□□□ -0.17
TRIM23-205ENST00000506400 LAMB2P55268 1798 aa13.99□□□□□ -0.17
TRIM23-205ENST00000506400 RTL9Q8NET4 1388 aa13.98□□□□□ -0.17
TRIM23-205ENST00000506400 SRGNP10124 158 aa13.98□□□□□ -0.17
TRIM23-205ENST00000506400 NPR1P16066 1061 aa13.98□□□□□ -0.17
TRIM23-205ENST00000506400 CCDC57Q2TAC2 916 aa13.98□□□□□ -0.17
TRIM23-205ENST00000506400 ERICH6BQ5W0A0 696 aa13.98□□□□□ -0.17
TRIM23-205ENST00000506400 C3orf67Q6ZVT6 689 aa13.98□□□□□ -0.17
TRIM23-205ENST00000506400 DDX46Q7L014 1031 aaKnown RBP13.98□□□□□ -0.17
TRIM23-205ENST00000506400 C2CD5Q86YS7 1000 aa13.98□□□□□ -0.17
TRIM23-205ENST00000506400 RBM17Q96I25 401 aaKnown RBP13.98□□□□□ -0.17
TRIM23-205ENST00000506400 CHMP3Q9Y3E7 222 aa13.98□□□□□ -0.17
TRIM23-205ENST00000506400 DDX60Q8IY21 1712 aaKnown RBP13.98□□□□□ -0.17
TRIM23-205ENST00000506400 ANKRD18BA2A2Z9 1011 aa13.97□□□□□ -0.17
TRIM23-205ENST00000506400 ALDH1B1P30837 517 aa13.97□□□□□ -0.17
TRIM23-205ENST00000506400 HOXA10P31260 410 aaPredicted RBP13.97□□□□□ -0.17
TRIM23-205ENST00000506400 ATP8B2P98198 1209 aa13.97□□□□□ -0.17
TRIM23-205ENST00000506400 IFIT5Q13325 482 aaKnown RBP13.97□□□□□ -0.17
TRIM23-205ENST00000506400 STYK1Q6J9G0 422 aa13.97□□□□□ -0.17
TRIM23-205ENST00000506400 CEP85Q6P2H3 762 aa13.97□□□□□ -0.17
TRIM23-205ENST00000506400 KLHL34Q8N239 644 aa13.97□□□□□ -0.17
TRIM23-205ENST00000506400 MASTLQ96GX5 879 aa13.97□□□□□ -0.17
TRIM23-205ENST00000506400 CRAMP1Q96RY5 1269 aa13.97□□□□□ -0.17
TRIM23-205ENST00000506400 GREM2Q9H772 168 aa13.97□□□□□ -0.17
TRIM23-205ENST00000506400 TNRC6CQ9HCJ0 1690 aaKnown RBP13.96□□□□□ -0.17
TRIM23-205ENST00000506400 SRGAP3O43295 1099 aa13.96□□□□□ -0.17
TRIM23-205ENST00000506400 HMMRO75330 724 aa13.96□□□□□ -0.17
TRIM23-205ENST00000506400 FAM161AQ3B820 660 aa13.96□□□□□ -0.17
TRIM23-205ENST00000506400 CCDC85AQ96PX6 553 aaPredicted RBP13.96□□□□□ -0.17
TRIM23-205ENST00000506400 CDC5LQ99459 802 aaKnown RBP13.96□□□□□ -0.17
TRIM23-205ENST00000506400 ITGA6P23229 1130 aa13.95□□□□□ -0.18
TRIM23-205ENST00000506400 CHRNA5P30532 468 aa13.95□□□□□ -0.18
TRIM23-205ENST00000506400 GRAPQ13588 217 aa13.95□□□□□ -0.18
TRIM23-205ENST00000506400 GRAPLQ8TC17 118 aaPredicted RBP13.95□□□□□ -0.18
TRIM23-205ENST00000506400 SSH3Q8TE77 659 aa13.95□□□□□ -0.18
TRIM23-205ENST00000506400 ZNF622Q969S3 477 aaKnown RBP eCLIP13.95□□□□□ -0.18
TRIM23-205ENST00000506400 PNMA6EA0A0J9YXQ4 647 aa13.94□□□□□ -0.18
TRIM23-205ENST00000506400 DPEP1P16444 411 aa13.94□□□□□ -0.18
TRIM23-205ENST00000506400 POLA2Q14181 598 aa13.94□□□□□ -0.18
TRIM23-205ENST00000506400 TAF7LQ5H9L4 462 aa13.94□□□□□ -0.18
TRIM23-205ENST00000506400 ANKRD18AQ8IVF6 992 aa13.94□□□□□ -0.18
TRIM23-205ENST00000506400 ANKRD31Q8N7Z5 1873 aa13.94□□□□□ -0.18
TRIM23-205ENST00000506400 CNKSR1Q969H4 720 aa13.94□□□□□ -0.18
TRIM23-205ENST00000506400 FHDC1Q9C0D6 1143 aaPredicted RBP13.94□□□□□ -0.18
TRIM23-205ENST00000506400 SEC31BQ9NQW1 1179 aa13.94□□□□□ -0.18
TRIM23-205ENST00000506400 PCDHB15Q9Y5E8 787 aa13.94□□□□□ -0.18
TRIM23-205ENST00000506400 KIF13BQ9NQT8 1826 aa13.94□□□□□ -0.18
TRIM23-205ENST00000506400 LRP5O75197 1615 aa13.93□□□□□ -0.18
TRIM23-205ENST00000506400 A0A0G2JLW4 131 aa13.93□□□□□ -0.18
TRIM23-205ENST00000506400 BBOX1O75936 387 aa13.93□□□□□ -0.18
TRIM23-205ENST00000506400 IGHMBP2P38935 993 aaKnown RBP13.93□□□□□ -0.18
TRIM23-205ENST00000506400 RFX5P48382 616 aaPredicted RBP13.93□□□□□ -0.18
TRIM23-205ENST00000506400 RPS8P62241 208 aaKnown RBP13.93□□□□□ -0.18
TRIM23-205ENST00000506400 TMC4Q7Z404 712 aa13.93□□□□□ -0.18
TRIM23-205ENST00000506400 FBXO3Q9UK99 471 aa13.93□□□□□ -0.18
TRIM23-205ENST00000506400 KCNA3P22001 575 aa13.92□□□□□ -0.18
TRIM23-205ENST00000506400 PTPN12Q05209 780 aaKnown RBP13.92□□□□□ -0.18
TRIM23-205ENST00000506400 SIRT2Q8IXJ6 389 aa13.92□□□□□ -0.18
TRIM23-205ENST00000506400 TTLL6Q8N841 843 aa13.92□□□□□ -0.18
TRIM23-205ENST00000506400 MPHOSPH8Q99549 860 aa13.92□□□□□ -0.18
TRIM23-205ENST00000506400 COPRSQ9NQ92 184 aa13.92□□□□□ -0.18
TRIM23-205ENST00000506400 PIM2Q9P1W9 311 aa13.92□□□□□ -0.18
TRIM23-205ENST00000506400 HDAC1Q13547 482 aaPredicted RBP13.91□□□□□ -0.18
TRIM23-205ENST00000506400 LDHAL6AQ6ZMR3 332 aa13.91□□□□□ -0.18
TRIM23-205ENST00000506400 CELF1Q92879 486 aaKnown RBP13.91□□□□□ -0.18
TRIM23-205ENST00000506400 SYT17Q9BSW7 474 aa13.91□□□□□ -0.18
TRIM23-205ENST00000506400 RWDD1Q9H446 243 aaPredicted RBP13.91□□□□□ -0.18
TRIM23-205ENST00000506400 HSP90AB4PQ58FF6 505 aa13.9□□□□□ -0.18
TRIM23-205ENST00000506400 ZNF594Q96JF6 807 aaPredicted RBP13.9□□□□□ -0.18
TRIM23-205ENST00000506400 TMX4Q9H1E5 349 aaPredicted RBP13.9□□□□□ -0.18
TRIM23-205ENST00000506400 CNNM1Q9NRU3 951 aa13.9□□□□□ -0.18
TRIM23-205ENST00000506400 BSDC1Q9NW68 430 aaPredicted RBP13.9□□□□□ -0.18
TRIM23-205ENST00000506400 NOP58Q9Y2X3 529 aaKnown RBP13.9□□□□□ -0.18
TRIM23-205ENST00000506400 MYH3P11055 1940 aa13.9□□□□□ -0.18
TRIM23-205ENST00000506400 COL11A2P13942 1736 aaPredicted RBP13.9□□□□□ -0.18
TRIM23-205ENST00000506400 EYA2O00167 538 aa13.89□□□□□ -0.19
TRIM23-205ENST00000506400 PPEF1O14829 653 aaPredicted RBP13.89□□□□□ -0.19
TRIM23-205ENST00000506400 SURF6O75683 361 aaKnown RBP13.89□□□□□ -0.19
TRIM23-205ENST00000506400 CIAO1O76071 339 aa13.89□□□□□ -0.19
TRIM23-205ENST00000506400 G3BP1Q13283 466 aaKnown RBP eCLIP13.89□□□□□ -0.19
TRIM23-205ENST00000506400 DALRD3Q5D0E6 543 aaKnown RBP13.89□□□□□ -0.19
TRIM23-205ENST00000506400 PRPF40BQ6NWY9 871 aaKnown RBP13.89□□□□□ -0.19
TRIM23-205ENST00000506400 SP8Q8IXZ3 490 aa13.89□□□□□ -0.19
TRIM23-205ENST00000506400 NLGN2Q8NFZ4 835 aa13.89□□□□□ -0.19
TRIM23-205ENST00000506400 PA2G4Q9UQ80 394 aaKnown RBP13.89□□□□□ -0.19
TRIM23-205ENST00000506400 KIAA1551Q9HCM1 1747 aa13.88□□□□□ -0.19
TRIM23-205ENST00000506400 IL15P40933 162 aaPredicted RBP13.88□□□□□ -0.19
TRIM23-205ENST00000506400 CC2D2BQ6DHV5 1058 aa13.88□□□□□ -0.19
TRIM23-205ENST00000506400 KLHDC4Q8TBB5 520 aa13.88□□□□□ -0.19
TRIM23-205ENST00000506400 ATP6V0A2Q9Y487 856 aa13.88□□□□□ -0.19
TRIM23-205ENST00000506400 MROH5Q6ZUA9 1318 aa13.88□□□□□ -0.19
TRIM23-205ENST00000506400 DLEC1Q9Y238 1755 aa13.87□□□□□ -0.19
TRIM23-205ENST00000506400 RAB11FIP3O75154 756 aa13.87□□□□□ -0.19
TRIM23-205ENST00000506400 OS9Q13438 667 aaPredicted RBP13.87□□□□□ -0.19
TRIM23-205ENST00000506400 GRIPAP1Q4V328 841 aa13.87□□□□□ -0.19
TRIM23-205ENST00000506400 LRRC24Q50LG9 513 aa13.87□□□□□ -0.19
TRIM23-205ENST00000506400 SOGA3Q5TF21 947 aa13.87□□□□□ -0.19
TRIM23-205ENST00000506400 ERC1Q8IUD2 1116 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms