RNA–Protein interactions for RNA: ENST00000506388.2

RCN1-202, Transcript of reticulocalbin 1, humanhuman

TSL 1 (best)

Gene RCN1, Length 1,658 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-202ENST00000506388 LMBR1LQ6UX01 489 aa16.65■□□□□ 0.26
RCN1-202ENST00000506388 JARID2Q92833 1246 aaPredicted RBP16.65■□□□□ 0.26
RCN1-202ENST00000506388 C10orf71Q711Q0 1435 aa16.65■□□□□ 0.26
RCN1-202ENST00000506388 PSDA5PKW4 1024 aaPredicted RBP16.65■□□□□ 0.26
RCN1-202ENST00000506388 FAM177BA6PVY3 158 aa16.65■□□□□ 0.26
RCN1-202ENST00000506388 HCLS1P14317 486 aaPredicted RBP16.65■□□□□ 0.26
RCN1-202ENST00000506388 POLD1P28340 1107 aa16.65■□□□□ 0.26
RCN1-202ENST00000506388 CCDC152Q4G0S7 254 aa16.65■□□□□ 0.26
RCN1-202ENST00000506388 SRGAP3O43295 1099 aa16.64■□□□□ 0.25
RCN1-202ENST00000506388 RWDD1Q9H446 243 aaPredicted RBP16.64■□□□□ 0.25
RCN1-202ENST00000506388 COPRSQ9NQ92 184 aa16.64■□□□□ 0.25
RCN1-202ENST00000506388 FBXO3Q9UK99 471 aa16.64■□□□□ 0.25
RCN1-202ENST00000506388 PNMA6EA0A0J9YXQ4 647 aa16.63■□□□□ 0.25
RCN1-202ENST00000506388 ZBTB7AO95365 584 aa16.63■□□□□ 0.25
RCN1-202ENST00000506388 HOXA10P31260 410 aaPredicted RBP16.63■□□□□ 0.25
RCN1-202ENST00000506388 PDE6BP35913 854 aa16.63■□□□□ 0.25
RCN1-202ENST00000506388 PTGER2P43116 358 aa16.63■□□□□ 0.25
RCN1-202ENST00000506388 RFX5P48382 616 aaPredicted RBP16.63■□□□□ 0.25
RCN1-202ENST00000506388 DLEC1Q9Y238 1755 aa16.63■□□□□ 0.25
RCN1-202ENST00000506388 NPHP1O15259 732 aa16.62■□□□□ 0.25
RCN1-202ENST00000506388 NOP58Q9Y2X3 529 aaKnown RBP16.62■□□□□ 0.25
RCN1-202ENST00000506388 DCTPP1Q9H773 170 aa16.62■□□□□ 0.25
RCN1-202ENST00000506388 LRP5O75197 1615 aa16.62■□□□□ 0.25
RCN1-202ENST00000506388 IFIT5Q13325 482 aaKnown RBP16.61■□□□□ 0.25
RCN1-202ENST00000506388 CCDC57Q2TAC2 916 aa16.61■□□□□ 0.25
RCN1-202ENST00000506388 SMC5Q8IY18 1101 aa16.61■□□□□ 0.25
RCN1-202ENST00000506388 GREM2Q9H772 168 aa16.61■□□□□ 0.25
RCN1-202ENST00000506388 SPON1Q9HCB6 807 aa16.61■□□□□ 0.25
RCN1-202ENST00000506388 PTPN12Q05209 780 aaKnown RBP16.6■□□□□ 0.25
RCN1-202ENST00000506388 C3orf67Q6ZVT6 689 aa16.6■□□□□ 0.25
RCN1-202ENST00000506388 GCC1Q96CN9 775 aa16.6■□□□□ 0.25
RCN1-202ENST00000506388 KDM2BQ8NHM5 1336 aa16.6■□□□□ 0.25
RCN1-202ENST00000506388 COL11A2P13942 1736 aaPredicted RBP16.6■□□□□ 0.25
RCN1-202ENST00000506388 ANKRD18BA2A2Z9 1011 aa16.59■□□□□ 0.25
RCN1-202ENST00000506388 ITGA6P23229 1130 aa16.59■□□□□ 0.25
RCN1-202ENST00000506388 FAM161AQ3B820 660 aa16.59■□□□□ 0.25
RCN1-202ENST00000506388 CCDC136Q96JN2 1154 aa16.59■□□□□ 0.25
RCN1-202ENST00000506388 CRAMP1Q96RY5 1269 aa16.59■□□□□ 0.25
RCN1-202ENST00000506388 ATF5Q9Y2D1 282 aaPredicted RBP16.59■□□□□ 0.25
RCN1-202ENST00000506388 KIAA1551Q9HCM1 1747 aa16.59■□□□□ 0.25
RCN1-202ENST00000506388 CIAO1O76071 339 aa16.59■□□□□ 0.25
RCN1-202ENST00000506388 IGHDP01880 384 aa16.59■□□□□ 0.25
RCN1-202ENST00000506388 SRGNP10124 158 aa16.59■□□□□ 0.25
RCN1-202ENST00000506388 HSP90AB4PQ58FF6 505 aa16.59■□□□□ 0.25
RCN1-202ENST00000506388 CDC5LQ99459 802 aaKnown RBP16.59■□□□□ 0.25
RCN1-202ENST00000506388 CD2APQ9Y5K6 639 aa16.59■□□□□ 0.25
RCN1-202ENST00000506388 TGFB2P61812 414 aa16.58■□□□□ 0.24
RCN1-202ENST00000506388 CENPQQ7L2Z9 268 aaPredicted RBP16.58■□□□□ 0.24
RCN1-202ENST00000506388 NPR1P16066 1061 aa16.57■□□□□ 0.24
RCN1-202ENST00000506388 DDX46Q7L014 1031 aaKnown RBP16.57■□□□□ 0.24
RCN1-202ENST00000506388 TAF1P21675 1872 aa16.57■□□□□ 0.24
RCN1-202ENST00000506388 RAB11FIP3O75154 756 aa16.56■□□□□ 0.24
RCN1-202ENST00000506388 BRCA1P38398 1863 aaKnown RBP16.56■□□□□ 0.24
RCN1-202ENST00000506388 STYK1Q6J9G0 422 aa16.56■□□□□ 0.24
RCN1-202ENST00000506388 TMC4Q7Z404 712 aa16.56■□□□□ 0.24
RCN1-202ENST00000506388 CCDC24Q8N4L8 307 aa16.56■□□□□ 0.24
RCN1-202ENST00000506388 MASTLQ96GX5 879 aa16.56■□□□□ 0.24
RCN1-202ENST00000506388 H0YIN7 160 aa16.56■□□□□ 0.24
RCN1-202ENST00000506388 EYA2O00167 538 aa16.56■□□□□ 0.24
RCN1-202ENST00000506388 BBOX1O75936 387 aa16.56■□□□□ 0.24
RCN1-202ENST00000506388 ALDH1B1P30837 517 aa16.56■□□□□ 0.24
RCN1-202ENST00000506388 ERC1Q8IUD2 1116 aa16.56■□□□□ 0.24
RCN1-202ENST00000506388 RPGRQ92834 1020 aaKnown RBP16.56■□□□□ 0.24
RCN1-202ENST00000506388 RBM17Q96I25 401 aaKnown RBP16.56■□□□□ 0.24
RCN1-202ENST00000506388 CHMP3Q9Y3E7 222 aa16.56■□□□□ 0.24
RCN1-202ENST00000506388 LRRC37AA6NMS7 1700 aa16.55■□□□□ 0.24
RCN1-202ENST00000506388 SURF6O75683 361 aaKnown RBP16.55■□□□□ 0.24
RCN1-202ENST00000506388 IL15P40933 162 aaPredicted RBP16.55■□□□□ 0.24
RCN1-202ENST00000506388 RPS8P62241 208 aaKnown RBP16.55■□□□□ 0.24
RCN1-202ENST00000506388 GRAPQ13588 217 aa16.55■□□□□ 0.24
RCN1-202ENST00000506388 GRAPLQ8TC17 118 aaPredicted RBP16.55■□□□□ 0.24
RCN1-202ENST00000506388 SEC31BQ9NQW1 1179 aa16.55■□□□□ 0.24
RCN1-202ENST00000506388 BSDC1Q9NW68 430 aaPredicted RBP16.55■□□□□ 0.24
RCN1-202ENST00000506388 SPEF2Q9C093 1822 aa16.54■□□□□ 0.24
RCN1-202ENST00000506388 ATG9AQ7Z3C6 839 aa16.54■□□□□ 0.24
RCN1-202ENST00000506388 RIPOR2Q9Y4F9 1068 aa16.54■□□□□ 0.24
RCN1-202ENST00000506388 A0A1B0GUL6 1792 aa16.54■□□□□ 0.24
RCN1-202ENST00000506388 COL4A1P02462 1669 aa16.54■□□□□ 0.24
RCN1-202ENST00000506388 IGHMBP2P38935 993 aaKnown RBP16.53■□□□□ 0.24
RCN1-202ENST00000506388 B4GALNT3Q6L9W6 998 aa16.53■□□□□ 0.24
RCN1-202ENST00000506388 LDHAL6AQ6ZMR3 332 aa16.53■□□□□ 0.24
RCN1-202ENST00000506388 C2CD5Q86YS7 1000 aa16.53■□□□□ 0.24
RCN1-202ENST00000506388 ANKRD18AQ8IVF6 992 aa16.53■□□□□ 0.24
RCN1-202ENST00000506388 G3BP1Q13283 466 aaKnown RBP eCLIP16.53■□□□□ 0.24
RCN1-202ENST00000506388 TAF7LQ5H9L4 462 aa16.53■□□□□ 0.24
RCN1-202ENST00000506388 CELF1Q92879 486 aaKnown RBP16.53■□□□□ 0.24
RCN1-202ENST00000506388 CNKSR1Q969H4 720 aa16.53■□□□□ 0.24
RCN1-202ENST00000506388 CCDC85AQ96PX6 553 aaPredicted RBP16.53■□□□□ 0.24
RCN1-202ENST00000506388 PA2G4Q9UQ80 394 aaKnown RBP16.53■□□□□ 0.24
RCN1-202ENST00000506388 KLHDC4Q8TBB5 520 aa16.52■□□□□ 0.23
RCN1-202ENST00000506388 KIF1BPQ96EK5 621 aa16.52■□□□□ 0.23
RCN1-202ENST00000506388 ZNF594Q96JF6 807 aaPredicted RBP16.52■□□□□ 0.23
RCN1-202ENST00000506388 MPHOSPH8Q99549 860 aa16.52■□□□□ 0.23
RCN1-202ENST00000506388 GPR108Q9NPR9 543 aa16.52■□□□□ 0.23
RCN1-202ENST00000506388 MROH5Q6ZUA9 1318 aa16.52■□□□□ 0.23
RCN1-202ENST00000506388 SASH1O94885 1247 aa16.51■□□□□ 0.23
RCN1-202ENST00000506388 KCNA3P22001 575 aa16.51■□□□□ 0.23
RCN1-202ENST00000506388 EXOC6BQ9Y2D4 811 aa16.51■□□□□ 0.23
RCN1-202ENST00000506388 NUCB1Q02818 461 aa16.5■□□□□ 0.23
RCN1-202ENST00000506388 RHPN1Q8TCX5 695 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms