RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 PDZRN3Q9UPQ7 1066 aa7.52□□□□□ -1.21
SCLT1-207ENST00000506233 SPEF2Q9C093 1822 aa7.52□□□□□ -1.21
SCLT1-207ENST00000506233 PPP1R3GB7ZBB8 358 aa7.51□□□□□ -1.21
SCLT1-207ENST00000506233 TCERG1O14776 1098 aaKnown RBP7.51□□□□□ -1.21
SCLT1-207ENST00000506233 ATP9BO43861 1147 aa7.51□□□□□ -1.21
SCLT1-207ENST00000506233 VAMP1P23763 118 aa7.51□□□□□ -1.21
SCLT1-207ENST00000506233 EIF4A1P60842 406 aaKnown RBP7.51□□□□□ -1.21
SCLT1-207ENST00000506233 DEPDC4Q8N2C3 294 aa7.51□□□□□ -1.21
SCLT1-207ENST00000506233 PRM3Q9NNZ6 103 aa7.51□□□□□ -1.21
SCLT1-207ENST00000506233 ERCC3P19447 782 aa7.51□□□□□ -1.21
SCLT1-207ENST00000506233 GUCA2AQ02747 115 aa7.51□□□□□ -1.21
SCLT1-207ENST00000506233 PROSER3Q2NL68 480 aa7.51□□□□□ -1.21
SCLT1-207ENST00000506233 CFAP53Q96M91 514 aa7.51□□□□□ -1.21
SCLT1-207ENST00000506233 C19orf44Q9H6X5 657 aa7.51□□□□□ -1.21
SCLT1-207ENST00000506233 AKAP11Q9UKA4 1901 aa7.51□□□□□ -1.21
SCLT1-207ENST00000506233 C4AP0C0L4 1744 aa7.51□□□□□ -1.21
SCLT1-207ENST00000506233 C4BP0C0L5 1744 aa7.51□□□□□ -1.21
SCLT1-207ENST00000506233 C3orf80F5H4A9 247 aa7.51□□□□□ -1.21
SCLT1-207ENST00000506233 RAD51AP2Q09MP3 1159 aa7.51□□□□□ -1.21
SCLT1-207ENST00000506233 OTUD7AQ8TE49 926 aaPredicted RBP7.51□□□□□ -1.21
SCLT1-207ENST00000506233 ZNF526Q8TF50 670 aaPredicted RBP7.51□□□□□ -1.21
SCLT1-207ENST00000506233 BIN2Q9UBW5 565 aaPredicted RBP7.51□□□□□ -1.21
SCLT1-207ENST00000506233 COL24A1Q17RW2 1714 aa7.51□□□□□ -1.21
SCLT1-207ENST00000506233 PCNTO95613 3336 aa7.5□□□□□ -1.21
SCLT1-207ENST00000506233 NUTM2BA6NNL0 878 aaPredicted RBP7.5□□□□□ -1.21
SCLT1-207ENST00000506233 NUTM2EB1AL46 878 aaPredicted RBP7.5□□□□□ -1.21
SCLT1-207ENST00000506233 HDLBPQ00341 1268 aaKnown RBP7.5□□□□□ -1.21
SCLT1-207ENST00000506233 NUTM2AQ8IVF1 878 aaPredicted RBP7.5□□□□□ -1.21
SCLT1-207ENST00000506233 DZIP1LQ8IYY4 767 aaKnown RBP7.5□□□□□ -1.21
SCLT1-207ENST00000506233 SRCAPQ6ZRS2 3230 aa7.5□□□□□ -1.21
SCLT1-207ENST00000506233 CYP27B1O15528 508 aa7.5□□□□□ -1.21
SCLT1-207ENST00000506233 ELOAQ14241 798 aaKnown RBP7.5□□□□□ -1.21
SCLT1-207ENST00000506233 TWISTNBQ3B726 338 aaPredicted RBP7.5□□□□□ -1.21
SCLT1-207ENST00000506233 RBM46Q8TBY0 533 aaKnown RBP7.5□□□□□ -1.21
SCLT1-207ENST00000506233 MICAL1Q8TDZ2 1067 aa7.5□□□□□ -1.21
SCLT1-207ENST00000506233 CDCA7Q9BWT1 371 aaPredicted RBP7.5□□□□□ -1.21
SCLT1-207ENST00000506233 MYH16Q9H6N6 1097 aa7.5□□□□□ -1.21
SCLT1-207ENST00000506233 PCDHGC3Q9UN70 934 aa7.5□□□□□ -1.21
SCLT1-207ENST00000506233 DOCK2Q92608 1830 aa7.5□□□□□ -1.21
SCLT1-207ENST00000506233 HTATSF1O43719 755 aaKnown RBP7.5□□□□□ -1.21
SCLT1-207ENST00000506233 TMEM121BQ9BXQ6 578 aaPredicted RBP7.5□□□□□ -1.21
SCLT1-207ENST00000506233 LNPKQ9C0E8 428 aa7.5□□□□□ -1.21
SCLT1-207ENST00000506233 ANO2Q9NQ90 1003 aa7.5□□□□□ -1.21
SCLT1-207ENST00000506233 CD2BP2O95400 341 aaKnown RBP7.49□□□□□ -1.21
SCLT1-207ENST00000506233 COL9A3Q14050 684 aaPredicted RBP7.49□□□□□ -1.21
SCLT1-207ENST00000506233 ABTB2Q8N961 1025 aa7.49□□□□□ -1.21
SCLT1-207ENST00000506233 MYH3P11055 1940 aa7.49□□□□□ -1.21
SCLT1-207ENST00000506233 CEP85Q6P2H3 762 aa7.49□□□□□ -1.21
SCLT1-207ENST00000506233 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.49□□□□□ -1.21
SCLT1-207ENST00000506233 ECM29Q5VYK3 1845 aa7.49□□□□□ -1.21
SCLT1-207ENST00000506233 OATP04181 439 aa7.49□□□□□ -1.21
SCLT1-207ENST00000506233 ERCC5P28715 1186 aaPredicted RBP7.49□□□□□ -1.21
SCLT1-207ENST00000506233 ARID4AP29374 1257 aaPredicted RBP7.49□□□□□ -1.21
SCLT1-207ENST00000506233 ZKSCAN2Q63HK3 967 aa7.49□□□□□ -1.21
SCLT1-207ENST00000506233 C16orf71Q8IYS4 520 aaPredicted RBP7.49□□□□□ -1.21
SCLT1-207ENST00000506233 IL17RAQ96F46 866 aa7.49□□□□□ -1.21
SCLT1-207ENST00000506233 PHAXQ9H814 394 aaKnown RBP7.49□□□□□ -1.21
SCLT1-207ENST00000506233 UTYO14607 1347 aa7.48□□□□□ -1.21
SCLT1-207ENST00000506233 TTLL13PA6NNM8 815 aa7.48□□□□□ -1.21
SCLT1-207ENST00000506233 ESCO1Q5FWF5 840 aa7.48□□□□□ -1.21
SCLT1-207ENST00000506233 NOL8Q76FK4 1167 aaKnown RBP7.48□□□□□ -1.21
SCLT1-207ENST00000506233 MS4A3Q96HJ5 214 aa7.48□□□□□ -1.21
SCLT1-207ENST00000506233 MEIS3Q99687 375 aa7.48□□□□□ -1.21
SCLT1-207ENST00000506233 PRKAR2AP13861 404 aaKnown RBP7.48□□□□□ -1.21
SCLT1-207ENST00000506233 ECM1Q16610 540 aa7.48□□□□□ -1.21
SCLT1-207ENST00000506233 VTI1AQ96AJ9 217 aa7.48□□□□□ -1.21
SCLT1-207ENST00000506233 NEFLP07196 543 aa7.48□□□□□ -1.21
SCLT1-207ENST00000506233 ZNF211Q13398 564 aaPredicted RBP7.48□□□□□ -1.21
SCLT1-207ENST00000506233 DIXDC1Q155Q3 683 aa7.48□□□□□ -1.21
SCLT1-207ENST00000506233 NLGN1Q8N2Q7 840 aa7.48□□□□□ -1.21
SCLT1-207ENST00000506233 PRDM16Q9HAZ2 1276 aa7.48□□□□□ -1.21
SCLT1-207ENST00000506233 TAF1P21675 1872 aa7.48□□□□□ -1.21
SCLT1-207ENST00000506233 SCN7AQ01118 1682 aa7.47□□□□□ -1.21
SCLT1-207ENST00000506233 CASP7P55210 303 aa7.47□□□□□ -1.21
SCLT1-207ENST00000506233 KRT28Q7Z3Y7 464 aa7.47□□□□□ -1.21
SCLT1-207ENST00000506233 USP44Q9H0E7 712 aa7.47□□□□□ -1.21
SCLT1-207ENST00000506233 PIF1Q9H611 641 aa7.47□□□□□ -1.21
SCLT1-207ENST00000506233 BRWD3Q6RI45 1802 aa7.47□□□□□ -1.21
SCLT1-207ENST00000506233 PNMA6EA0A0J9YXQ4 647 aa7.47□□□□□ -1.21
SCLT1-207ENST00000506233 ELL2O00472 640 aaPredicted RBP7.47□□□□□ -1.21
SCLT1-207ENST00000506233 GNAI1P63096 354 aa7.47□□□□□ -1.21
SCLT1-207ENST00000506233 DHX38Q92620 1227 aaKnown RBP7.47□□□□□ -1.21
SCLT1-207ENST00000506233 ESF1Q9H501 851 aaKnown RBP7.47□□□□□ -1.21
SCLT1-207ENST00000506233 RNF19AQ9NV58 838 aa7.47□□□□□ -1.21
SCLT1-207ENST00000506233 FRAT1Q92837 279 aaPredicted RBP7.47□□□□□ -1.21
SCLT1-207ENST00000506233 SLC4A9Q96Q91 983 aa7.47□□□□□ -1.21
SCLT1-207ENST00000506233 ANO8Q9HCE9 1232 aaPredicted RBP7.47□□□□□ -1.21
SCLT1-207ENST00000506233 PIK3R5Q8WYR1 880 aa7.46□□□□□ -1.21
SCLT1-207ENST00000506233 DCTPP1Q9H773 170 aa7.46□□□□□ -1.21
SCLT1-207ENST00000506233 SMC4Q9NTJ3 1288 aa7.46□□□□□ -1.21
SCLT1-207ENST00000506233 LTBP1Q14766 1721 aa7.46□□□□□ -1.21
SCLT1-207ENST00000506233 NHSQ6T4R5 1651 aa7.46□□□□□ -1.22
SCLT1-207ENST00000506233 USP17L3A6NCW0 530 aa7.46□□□□□ -1.22
SCLT1-207ENST00000506233 USP17L4A6NCW7 530 aa7.46□□□□□ -1.22
SCLT1-207ENST00000506233 F6X3S4 739 aa7.46□□□□□ -1.22
SCLT1-207ENST00000506233 USP17L2Q6R6M4 530 aa7.46□□□□□ -1.22
SCLT1-207ENST00000506233 USP17L1Q7RTZ2 530 aa7.46□□□□□ -1.22
SCLT1-207ENST00000506233 PLEKHM2Q8IWE5 1019 aa7.46□□□□□ -1.22
SCLT1-207ENST00000506233 FAM174AQ8TBP5 190 aa7.46□□□□□ -1.22
SCLT1-207ENST00000506233 KLHL42Q9P2K6 505 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms