RNA–Protein interactions for RNA: ENST00000505871.6

SH3D21-205, Transcript of SH3 domain containing 21, humanhuman

TSL 2 BASIC

Gene SH3D21, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-205ENST00000505871 FSD1Q9BTV5 496 aa17.36■□□□□ 0.37
SH3D21-205ENST00000505871 RFX7Q2KHR2 1363 aa17.35■□□□□ 0.37
SH3D21-205ENST00000505871 NEK4P51957 841 aa17.35■□□□□ 0.37
SH3D21-205ENST00000505871 ITPK1Q13572 414 aa17.35■□□□□ 0.37
SH3D21-205ENST00000505871 LRRC24Q50LG9 513 aa17.35■□□□□ 0.37
SH3D21-205ENST00000505871 ZNF34Q8IZ26 560 aa17.35■□□□□ 0.37
SH3D21-205ENST00000505871 SNRKQ9NRH2 765 aa17.35■□□□□ 0.37
SH3D21-205ENST00000505871 ZNF609O15014 1411 aa17.35■□□□□ 0.37
SH3D21-205ENST00000505871 KCNQ2O43526 872 aa17.34■□□□□ 0.37
SH3D21-205ENST00000505871 IFIT5Q13325 482 aaKnown RBP17.34■□□□□ 0.37
SH3D21-205ENST00000505871 HAUS7Q99871 368 aa17.34■□□□□ 0.37
SH3D21-205ENST00000505871 TRMT112Q9UI30 125 aaKnown RBP17.34■□□□□ 0.37
SH3D21-205ENST00000505871 USP21Q9UK80 565 aa17.34■□□□□ 0.37
SH3D21-205ENST00000505871 MYH3P11055 1940 aa17.34■□□□□ 0.37
SH3D21-205ENST00000505871 COL5A3P25940 1745 aaPredicted RBP17.33■□□□□ 0.37
SH3D21-205ENST00000505871 IRS4O14654 1257 aaPredicted RBP17.33■□□□□ 0.36
SH3D21-205ENST00000505871 CTSWP56202 376 aa17.33■□□□□ 0.36
SH3D21-205ENST00000505871 NMIQ13287 307 aaPredicted RBP17.33■□□□□ 0.36
SH3D21-205ENST00000505871 PUS3Q9BZE2 481 aaKnown RBP17.33■□□□□ 0.36
SH3D21-205ENST00000505871 CEP126Q9P2H0 1117 aa17.33■□□□□ 0.36
SH3D21-205ENST00000505871 THSD7AQ9UPZ6 1657 aa17.33■□□□□ 0.36
SH3D21-205ENST00000505871 UBN2Q6ZU65 1347 aa17.33■□□□□ 0.36
SH3D21-205ENST00000505871 TAF7LQ5H9L4 462 aa17.32■□□□□ 0.36
SH3D21-205ENST00000505871 TTLL11Q8NHH1 800 aa17.32■□□□□ 0.36
SH3D21-205ENST00000505871 CERKQ8TCT0 537 aa17.32■□□□□ 0.36
SH3D21-205ENST00000505871 NEUROD6Q96NK8 337 aa17.32■□□□□ 0.36
SH3D21-205ENST00000505871 MYH14Q7Z406 1995 aaKnown RBP17.32■□□□□ 0.36
SH3D21-205ENST00000505871 PDE8AO60658 829 aa17.32■□□□□ 0.36
SH3D21-205ENST00000505871 AK7Q96M32 723 aa17.32■□□□□ 0.36
SH3D21-205ENST00000505871 FAM227BQ96M60 508 aa17.32■□□□□ 0.36
SH3D21-205ENST00000505871 FOXD4L1Q9NU39 408 aa17.32■□□□□ 0.36
SH3D21-205ENST00000505871 AKAP2Q9Y2D5 859 aa17.32■□□□□ 0.36
SH3D21-205ENST00000505871 SNX14Q9Y5W7 946 aa17.32■□□□□ 0.36
SH3D21-205ENST00000505871 CCDC171Q6TFL3 1326 aa17.31■□□□□ 0.36
SH3D21-205ENST00000505871 RAB3GAP1Q15042 981 aa17.31■□□□□ 0.36
SH3D21-205ENST00000505871 TICAM2Q86XR7 235 aa17.31■□□□□ 0.36
SH3D21-205ENST00000505871 SYNE4Q8N205 404 aa17.31■□□□□ 0.36
SH3D21-205ENST00000505871 MED23Q9ULK4 1368 aa17.31■□□□□ 0.36
SH3D21-205ENST00000505871 A0A1B0GUL7 405 aa17.31■□□□□ 0.36
SH3D21-205ENST00000505871 CAMTA2O94983 1202 aa17.31■□□□□ 0.36
SH3D21-205ENST00000505871 TIMM10P62072 90 aa17.31■□□□□ 0.36
SH3D21-205ENST00000505871 PTH1RQ03431 593 aa17.31■□□□□ 0.36
SH3D21-205ENST00000505871 CWC22Q9HCG8 908 aaKnown RBP17.31■□□□□ 0.36
SH3D21-205ENST00000505871 KCNB2Q92953 911 aa17.3■□□□□ 0.36
SH3D21-205ENST00000505871 A0A0D9SFI3 127 aa17.29■□□□□ 0.36
SH3D21-205ENST00000505871 ANKRD18BA2A2Z9 1011 aa17.29■□□□□ 0.36
SH3D21-205ENST00000505871 ITGA6P23229 1130 aa17.29■□□□□ 0.36
SH3D21-205ENST00000505871 PARP10Q53GL7 1025 aa17.29■□□□□ 0.36
SH3D21-205ENST00000505871 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.29■□□□□ 0.36
SH3D21-205ENST00000505871 EDC3Q96F86 508 aaKnown RBP17.29■□□□□ 0.36
SH3D21-205ENST00000505871 CCDC85AQ96PX6 553 aaPredicted RBP17.29■□□□□ 0.36
SH3D21-205ENST00000505871 DNAJC2Q99543 621 aaKnown RBP17.29■□□□□ 0.36
SH3D21-205ENST00000505871 MCM4P33991 863 aa17.29■□□□□ 0.36
SH3D21-205ENST00000505871 MAP4K1Q92918 833 aa17.29■□□□□ 0.36
SH3D21-205ENST00000505871 GREM2Q9H772 168 aa17.29■□□□□ 0.36
SH3D21-205ENST00000505871 SPEF2Q9C093 1822 aa17.29■□□□□ 0.36
SH3D21-205ENST00000505871 RASEFQ8IZ41 740 aa17.28■□□□□ 0.36
SH3D21-205ENST00000505871 KBTBD3Q8NAB2 608 aa17.28■□□□□ 0.36
SH3D21-205ENST00000505871 TMX3Q96JJ7 454 aa17.28■□□□□ 0.36
SH3D21-205ENST00000505871 UPF3BQ9BZI7 483 aaKnown RBP17.28■□□□□ 0.36
SH3D21-205ENST00000505871 SH3TC1Q8TE82 1336 aa17.28■□□□□ 0.36
SH3D21-205ENST00000505871 NECTIN1Q15223 517 aa17.28■□□□□ 0.36
SH3D21-205ENST00000505871 SUSD4Q5VX71 490 aa17.28■□□□□ 0.36
SH3D21-205ENST00000505871 RIPOR2Q9Y4F9 1068 aa17.28■□□□□ 0.36
SH3D21-205ENST00000505871 RIC1Q4ADV7 1423 aa17.27■□□□□ 0.36
SH3D21-205ENST00000505871 BCORQ6W2J9 1755 aa17.27■□□□□ 0.36
SH3D21-205ENST00000505871 TNPO1Q92973 898 aaKnown RBP17.27■□□□□ 0.36
SH3D21-205ENST00000505871 UTP14AQ9BVJ6 771 aaKnown RBP17.27■□□□□ 0.36
SH3D21-205ENST00000505871 NHSQ6T4R5 1651 aa17.27■□□□□ 0.36
SH3D21-205ENST00000505871 CUL4AQ13619 759 aa17.27■□□□□ 0.35
SH3D21-205ENST00000505871 MEX3CQ5U5Q3 659 aaKnown RBP17.27■□□□□ 0.35
SH3D21-205ENST00000505871 LDHAL6AQ6ZMR3 332 aa17.27■□□□□ 0.35
SH3D21-205ENST00000505871 TM6SF1Q9BZW5 370 aa17.27■□□□□ 0.35
SH3D21-205ENST00000505871 PAG1Q9NWQ8 432 aa17.27■□□□□ 0.35
SH3D21-205ENST00000505871 ZNF652Q9Y2D9 606 aa17.27■□□□□ 0.35
SH3D21-205ENST00000505871 RBM8AQ9Y5S9 174 aaKnown RBP17.27■□□□□ 0.35
SH3D21-205ENST00000505871 CNTNAP4Q9C0A0 1308 aa17.26■□□□□ 0.35
SH3D21-205ENST00000505871 IFIT1P09914 478 aaKnown RBP17.26■□□□□ 0.35
SH3D21-205ENST00000505871 HSP90B1P14625 803 aaKnown RBP17.26■□□□□ 0.35
SH3D21-205ENST00000505871 NUCB2P80303 420 aa17.26■□□□□ 0.35
SH3D21-205ENST00000505871 CCDC158Q5M9N0 1113 aa17.26■□□□□ 0.35
SH3D21-205ENST00000505871 PRPF40BQ6NWY9 871 aaKnown RBP17.26■□□□□ 0.35
SH3D21-205ENST00000505871 DDX46Q7L014 1031 aaKnown RBP17.26■□□□□ 0.35
SH3D21-205ENST00000505871 LINC00116Q8NCU8 138 aa17.26■□□□□ 0.35
SH3D21-205ENST00000505871 NDUFB9Q9Y6M9 179 aa17.26■□□□□ 0.35
SH3D21-205ENST00000505871 LRP5O75197 1615 aa17.26■□□□□ 0.35
SH3D21-205ENST00000505871 ZKSCAN1P17029 563 aaPredicted RBP17.25■□□□□ 0.35
SH3D21-205ENST00000505871 GBP4Q96PP9 640 aa17.25■□□□□ 0.35
SH3D21-205ENST00000505871 BTAF1O14981 1849 aa17.25■□□□□ 0.35
SH3D21-205ENST00000505871 RGL2O15211 777 aa17.25■□□□□ 0.35
SH3D21-205ENST00000505871 KCNJ4P48050 445 aa17.25■□□□□ 0.35
SH3D21-205ENST00000505871 METTL24Q5JXM2 366 aa17.25■□□□□ 0.35
SH3D21-205ENST00000505871 CLEC4GQ6UXB4 293 aa17.25■□□□□ 0.35
SH3D21-205ENST00000505871 XAGE2Q96GT9 111 aa17.25■□□□□ 0.35
SH3D21-205ENST00000505871 INTS4Q96HW7 963 aaKnown RBP17.25■□□□□ 0.35
SH3D21-205ENST00000505871 GJD4Q96KN9 370 aaPredicted RBP17.25■□□□□ 0.35
SH3D21-205ENST00000505871 TTC14Q96N46 770 aa17.25■□□□□ 0.35
SH3D21-205ENST00000505871 CNNM1Q9NRU3 951 aa17.25■□□□□ 0.35
SH3D21-205ENST00000505871 ABCC12Q96J65 1359 aa17.25■□□□□ 0.35
SH3D21-205ENST00000505871 DDX11L8A8MPP1 907 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms