RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.62□□□□□ -0.23
NFKB1-205ENST00000505458 CSF1RP07333 972 aa13.61□□□□□ -0.23
NFKB1-205ENST00000505458 MAP4K1Q92918 833 aa13.61□□□□□ -0.23
NFKB1-205ENST00000505458 PALD1Q9ULE6 856 aa13.61□□□□□ -0.23
NFKB1-205ENST00000505458 NUP98P52948 1817 aa13.61□□□□□ -0.23
NFKB1-205ENST00000505458 KCNJ4P48050 445 aa13.61□□□□□ -0.23
NFKB1-205ENST00000505458 BOLA2Q9H3K6 86 aa13.61□□□□□ -0.23
NFKB1-205ENST00000505458 SH3TC1Q8TE82 1336 aa13.61□□□□□ -0.23
NFKB1-205ENST00000505458 NMIQ13287 307 aaPredicted RBP13.61□□□□□ -0.23
NFKB1-205ENST00000505458 TSGA10IPQ3SY00 556 aa13.61□□□□□ -0.23
NFKB1-205ENST00000505458 ALDH8A1Q9H2A2 487 aaPredicted RBP13.61□□□□□ -0.23
NFKB1-205ENST00000505458 CYP46A1Q9Y6A2 500 aa13.61□□□□□ -0.23
NFKB1-205ENST00000505458 ATG9AQ7Z3C6 839 aa13.6□□□□□ -0.23
NFKB1-205ENST00000505458 LIMCH1Q9UPQ0 1083 aa13.6□□□□□ -0.23
NFKB1-205ENST00000505458 U3KPZ7 1027 aaPredicted RBP13.6□□□□□ -0.23
NFKB1-205ENST00000505458 IFIT5Q13325 482 aaKnown RBP13.6□□□□□ -0.23
NFKB1-205ENST00000505458 TAF7LQ5H9L4 462 aa13.6□□□□□ -0.23
NFKB1-205ENST00000505458 PARP10Q53GL7 1025 aa13.6□□□□□ -0.23
NFKB1-205ENST00000505458 KBTBD3Q8NAB2 608 aa13.6□□□□□ -0.23
NFKB1-205ENST00000505458 CHMP4CQ96CF2 233 aa13.6□□□□□ -0.23
NFKB1-205ENST00000505458 HELLSQ9NRZ9 838 aa13.6□□□□□ -0.23
NFKB1-205ENST00000505458 NECTIN1Q15223 517 aa13.59□□□□□ -0.23
NFKB1-205ENST00000505458 KLHDC4Q8TBB5 520 aa13.59□□□□□ -0.23
NFKB1-205ENST00000505458 TTC14Q96N46 770 aa13.59□□□□□ -0.23
NFKB1-205ENST00000505458 CCDC158Q5M9N0 1113 aa13.59□□□□□ -0.23
NFKB1-205ENST00000505458 ZSWIM6Q9HCJ5 1215 aa13.59□□□□□ -0.23
NFKB1-205ENST00000505458 CCDC87Q9NVE4 849 aa13.59□□□□□ -0.23
NFKB1-205ENST00000505458 TLR7Q9NYK1 1049 aaKnown RBP13.59□□□□□ -0.23
NFKB1-205ENST00000505458 LAMB2P55268 1798 aa13.59□□□□□ -0.23
NFKB1-205ENST00000505458 ZFYP08048 801 aaPredicted RBP13.59□□□□□ -0.23
NFKB1-205ENST00000505458 NLRP10Q86W26 655 aa13.59□□□□□ -0.23
NFKB1-205ENST00000505458 RBM8AQ9Y5S9 174 aaKnown RBP13.58□□□□□ -0.24
NFKB1-205ENST00000505458 WDR33Q9C0J8 1336 aaKnown RBP13.58□□□□□ -0.24
NFKB1-205ENST00000505458 BAG4O95429 457 aaKnown RBP13.58□□□□□ -0.24
NFKB1-205ENST00000505458 DBNDD2Q9BQY9 259 aa13.58□□□□□ -0.24
NFKB1-205ENST00000505458 RPAP1Q9BWH6 1393 aaPredicted RBP13.58□□□□□ -0.24
NFKB1-205ENST00000505458 LRP5O75197 1615 aa13.58□□□□□ -0.24
NFKB1-205ENST00000505458 PDE8AO60658 829 aa13.57□□□□□ -0.24
NFKB1-205ENST00000505458 PRIM1P49642 420 aaKnown RBP13.57□□□□□ -0.24
NFKB1-205ENST00000505458 MCMDC2Q4G0Z9 681 aa13.57□□□□□ -0.24
NFKB1-205ENST00000505458 USPL1Q5W0Q7 1092 aa13.57□□□□□ -0.24
NFKB1-205ENST00000505458 DZIP3Q86Y13 1208 aaKnown RBP13.57□□□□□ -0.24
NFKB1-205ENST00000505458 ANKRD18BA2A2Z9 1011 aa13.57□□□□□ -0.24
NFKB1-205ENST00000505458 SSFA2P28290 1259 aa13.57□□□□□ -0.24
NFKB1-205ENST00000505458 CREB3L3Q68CJ9 461 aa13.57□□□□□ -0.24
NFKB1-205ENST00000505458 ZNF330Q9Y3S2 320 aaPredicted RBP13.57□□□□□ -0.24
NFKB1-205ENST00000505458 ADAMTS2O95450 1211 aa13.57□□□□□ -0.24
NFKB1-205ENST00000505458 SYTL4Q96C24 671 aaPredicted RBP13.57□□□□□ -0.24
NFKB1-205ENST00000505458 ZNF512BQ96KM6 892 aaPredicted RBP13.57□□□□□ -0.24
NFKB1-205ENST00000505458 IL25Q9H293 177 aa13.57□□□□□ -0.24
NFKB1-205ENST00000505458 ZNF652Q9Y2D9 606 aa13.57□□□□□ -0.24
NFKB1-205ENST00000505458 RUFY3Q7L099 469 aa13.56□□□□□ -0.24
NFKB1-205ENST00000505458 FOXD4L1Q9NU39 408 aa13.56□□□□□ -0.24
NFKB1-205ENST00000505458 PDRG1Q9NUG6 133 aa13.56□□□□□ -0.24
NFKB1-205ENST00000505458 PAG1Q9NWQ8 432 aa13.56□□□□□ -0.24
NFKB1-205ENST00000505458 ATP6V1DQ9Y5K8 247 aa13.56□□□□□ -0.24
NFKB1-205ENST00000505458 KAT6BQ8WYB5 2073 aa13.56□□□□□ -0.24
NFKB1-205ENST00000505458 HMGB1P09429 215 aaKnown RBP13.56□□□□□ -0.24
NFKB1-205ENST00000505458 CASTP20810 708 aaKnown RBP13.56□□□□□ -0.24
NFKB1-205ENST00000505458 EIF5P55010 431 aaKnown RBP13.56□□□□□ -0.24
NFKB1-205ENST00000505458 CTSWP56202 376 aa13.56□□□□□ -0.24
NFKB1-205ENST00000505458 VPS72Q15906 364 aa13.56□□□□□ -0.24
NFKB1-205ENST00000505458 KLHL40Q2TBA0 621 aa13.56□□□□□ -0.24
NFKB1-205ENST00000505458 PRPF40BQ6NWY9 871 aaKnown RBP13.56□□□□□ -0.24
NFKB1-205ENST00000505458 ZBTB1Q9Y2K1 713 aa13.56□□□□□ -0.24
NFKB1-205ENST00000505458 COL5A3P25940 1745 aaPredicted RBP13.56□□□□□ -0.24
NFKB1-205ENST00000505458 RTL9Q8NET4 1388 aa13.56□□□□□ -0.24
NFKB1-205ENST00000505458 ZNF34Q8IZ26 560 aa13.56□□□□□ -0.24
NFKB1-205ENST00000505458 JAKMIP1Q96N16 626 aaKnown RBP13.56□□□□□ -0.24
NFKB1-205ENST00000505458 SPATA31A6Q5VVP1 1343 aa13.56□□□□□ -0.24
NFKB1-205ENST00000505458 A0A1B0GUL7 405 aa13.55□□□□□ -0.24
NFKB1-205ENST00000505458 IFIT1P09914 478 aaKnown RBP13.55□□□□□ -0.24
NFKB1-205ENST00000505458 KLHL34Q8N239 644 aa13.55□□□□□ -0.24
NFKB1-205ENST00000505458 NEUROD6Q96NK8 337 aa13.55□□□□□ -0.24
NFKB1-205ENST00000505458 DSCC1Q9BVC3 393 aa13.55□□□□□ -0.24
NFKB1-205ENST00000505458 UPF3BQ9BZI7 483 aaKnown RBP13.55□□□□□ -0.24
NFKB1-205ENST00000505458 BRD1O95696 1058 aa13.55□□□□□ -0.24
NFKB1-205ENST00000505458 GORABQ5T7V8 394 aa13.55□□□□□ -0.24
NFKB1-205ENST00000505458 ZSCAN25Q6NSZ9 544 aa13.55□□□□□ -0.24
NFKB1-205ENST00000505458 JARID2Q92833 1246 aaPredicted RBP13.55□□□□□ -0.24
NFKB1-205ENST00000505458 BCORQ6W2J9 1755 aa13.55□□□□□ -0.24
NFKB1-205ENST00000505458 ARAP2Q8WZ64 1704 aa13.55□□□□□ -0.24
NFKB1-205ENST00000505458 A0A0D9SFI3 127 aa13.55□□□□□ -0.24
NFKB1-205ENST00000505458 SLC27A2O14975 620 aa13.55□□□□□ -0.24
NFKB1-205ENST00000505458 PTH1RQ03431 593 aa13.55□□□□□ -0.24
NFKB1-205ENST00000505458 BLOC1S2Q6QNY1 142 aa13.55□□□□□ -0.24
NFKB1-205ENST00000505458 FAM227BQ96M60 508 aa13.55□□□□□ -0.24
NFKB1-205ENST00000505458 GOLGA6L3A6NEY3 463 aa13.54□□□□□ -0.24
NFKB1-205ENST00000505458 DNAJC2Q99543 621 aaKnown RBP13.54□□□□□ -0.24
NFKB1-205ENST00000505458 TRMT112Q9UI30 125 aaKnown RBP13.54□□□□□ -0.24
NFKB1-205ENST00000505458 LOC102724428A0A0B4J2F2 783 aa13.54□□□□□ -0.24
NFKB1-205ENST00000505458 IRS4O14654 1257 aaPredicted RBP13.54□□□□□ -0.24
NFKB1-205ENST00000505458 TAF5LO75529 589 aa13.54□□□□□ -0.24
NFKB1-205ENST00000505458 MBD3O95983 291 aa13.54□□□□□ -0.24
NFKB1-205ENST00000505458 SIK1P57059 783 aa13.54□□□□□ -0.24
NFKB1-205ENST00000505458 TTC39AQ5SRH9 613 aa13.54□□□□□ -0.24
NFKB1-205ENST00000505458 AK2P54819 239 aa13.54□□□□□ -0.24
NFKB1-205ENST00000505458 RASEFQ8IZ41 740 aa13.54□□□□□ -0.24
NFKB1-205ENST00000505458 SLC4A9Q96Q91 983 aa13.54□□□□□ -0.24
NFKB1-205ENST00000505458 TTF1Q15361 905 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms