RNA–Protein interactions for RNA: ENST00000505402.1

CAST-216, Transcript of calpastatin, humanhuman

TSL 4

Gene CAST, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-216ENST00000505402 CDKL5O76039 1030 aa6.56□□□□□ -1.36
CAST-216ENST00000505402 TUBBP07437 444 aa6.56□□□□□ -1.36
CAST-216ENST00000505402 CT47B1P0C2W7 299 aaPredicted RBP6.56□□□□□ -1.36
CAST-216ENST00000505402 ABCD1P33897 745 aa6.56□□□□□ -1.36
CAST-216ENST00000505402 PEX19P40855 299 aa6.56□□□□□ -1.36
CAST-216ENST00000505402 APLP1P51693 650 aa6.56□□□□□ -1.36
CAST-216ENST00000505402 GYS2P54840 703 aa6.56□□□□□ -1.36
CAST-216ENST00000505402 FAM50AQ14320 339 aaKnown RBP6.56□□□□□ -1.36
CAST-216ENST00000505402 NBPF8Q3BBV2 869 aa6.56□□□□□ -1.36
CAST-216ENST00000505402 BMP2KLQ5H9B9 411 aa6.56□□□□□ -1.36
CAST-216ENST00000505402 CCDC183Q5T5S1 534 aa6.56□□□□□ -1.36
CAST-216ENST00000505402 MCTP1Q6DN14 999 aa6.56□□□□□ -1.36
CAST-216ENST00000505402 RCSD1Q6JBY9 416 aa6.56□□□□□ -1.36
CAST-216ENST00000505402 GBP6Q6ZN66 633 aa6.56□□□□□ -1.36
CAST-216ENST00000505402 KIF2CQ99661 725 aa6.56□□□□□ -1.36
CAST-216ENST00000505402 TTC12Q9H892 705 aaPredicted RBP6.56□□□□□ -1.36
CAST-216ENST00000505402 CPSF2Q9P2I0 782 aaKnown RBP6.56□□□□□ -1.36
CAST-216ENST00000505402 CASKIN1Q8WXD9 1431 aa6.56□□□□□ -1.36
CAST-216ENST00000505402 LAMC1P11047 1609 aa6.55□□□□□ -1.36
CAST-216ENST00000505402 SMARCA4P51532 1647 aa6.55□□□□□ -1.36
CAST-216ENST00000505402 NUTM2FA1L443 756 aa6.55□□□□□ -1.36
CAST-216ENST00000505402 PDLIM1O00151 329 aa6.55□□□□□ -1.36
CAST-216ENST00000505402 CHUKO15111 745 aa6.55□□□□□ -1.36
CAST-216ENST00000505402 RTN2O75298 545 aa6.55□□□□□ -1.36
CAST-216ENST00000505402 PPFIA4O75335 1185 aa6.55□□□□□ -1.36
CAST-216ENST00000505402 SNUPNO95149 360 aaKnown RBP6.55□□□□□ -1.36
CAST-216ENST00000505402 SLMAPQ14BN4 828 aa6.55□□□□□ -1.36
CAST-216ENST00000505402 PREPLQ4J6C6 727 aaPredicted RBP6.55□□□□□ -1.36
CAST-216ENST00000505402 WLSQ5T9L3 541 aa6.55□□□□□ -1.36
CAST-216ENST00000505402 HDGFL1Q5TGJ6 251 aa6.55□□□□□ -1.36
CAST-216ENST00000505402 CEP135Q66GS9 1140 aa6.55□□□□□ -1.36
CAST-216ENST00000505402 CCDC50Q8IVM0 306 aa6.55□□□□□ -1.36
CAST-216ENST00000505402 REXO1L1PQ8IX06 675 aa6.55□□□□□ -1.36
CAST-216ENST00000505402 ZNF516Q92618 1163 aa6.55□□□□□ -1.36
CAST-216ENST00000505402 JARID2Q92833 1246 aaPredicted RBP6.55□□□□□ -1.36
CAST-216ENST00000505402 SMARCE1Q969G3 411 aa6.55□□□□□ -1.36
CAST-216ENST00000505402 AGAP3Q96P47 875 aa6.55□□□□□ -1.36
CAST-216ENST00000505402 MTRQ99707 1265 aa6.55□□□□□ -1.36
CAST-216ENST00000505402 RANBP17Q9H2T7 1088 aaKnown RBP6.55□□□□□ -1.36
CAST-216ENST00000505402 TMX1Q9H3N1 280 aa6.55□□□□□ -1.36
CAST-216ENST00000505402 LCMT1Q9UIC8 334 aa6.55□□□□□ -1.36
CAST-216ENST00000505402 SOS1Q07889 1333 aaPredicted RBP6.54□□□□□ -1.36
CAST-216ENST00000505402 PIK3C2GO75747 1445 aa6.54□□□□□ -1.36
CAST-216ENST00000505402 H7C1W4 665 aa6.54□□□□□ -1.36
CAST-216ENST00000505402 PRPF40AO75400 957 aaKnown RBP6.54□□□□□ -1.36
CAST-216ENST00000505402 NBPF7P0C2Y1 421 aaPredicted RBP6.54□□□□□ -1.36
CAST-216ENST00000505402 MYBL2P10244 700 aa6.54□□□□□ -1.36
CAST-216ENST00000505402 PECAM1P16284 738 aaPredicted RBP6.54□□□□□ -1.36
CAST-216ENST00000505402 RPS6KA3P51812 740 aa6.54□□□□□ -1.36
CAST-216ENST00000505402 MNAT1P51948 309 aa6.54□□□□□ -1.36
CAST-216ENST00000505402 SART3Q15020 963 aaKnown RBP6.54□□□□□ -1.36
CAST-216ENST00000505402 CCDC158Q5M9N0 1113 aa6.54□□□□□ -1.36
CAST-216ENST00000505402 MORC1Q86VD1 984 aa6.54□□□□□ -1.36
CAST-216ENST00000505402 RPUSD2Q8IZ73 545 aaKnown RBP6.54□□□□□ -1.36
CAST-216ENST00000505402 NEK11Q8NG66 645 aa6.54□□□□□ -1.36
CAST-216ENST00000505402 INTS4Q96HW7 963 aaKnown RBP6.54□□□□□ -1.36
CAST-216ENST00000505402 TRERF1Q96PN7 1200 aa6.54□□□□□ -1.36
CAST-216ENST00000505402 BAG1Q99933 345 aaPredicted RBP6.54□□□□□ -1.36
CAST-216ENST00000505402 IRX2Q9BZI1 471 aaPredicted RBP6.54□□□□□ -1.36
CAST-216ENST00000505402 KCNF1Q9H3M0 494 aa6.54□□□□□ -1.36
CAST-216ENST00000505402 KDM4CQ9H3R0 1056 aa6.54□□□□□ -1.36
CAST-216ENST00000505402 MCM8Q9UJA3 840 aa6.54□□□□□ -1.36
CAST-216ENST00000505402 SYNPO2Q9UMS6 1093 aa6.54□□□□□ -1.36
CAST-216ENST00000505402 MAP3K5Q99683 1374 aa6.54□□□□□ -1.36
CAST-216ENST00000505402 CLTCL1P53675 1640 aa6.54□□□□□ -1.36
CAST-216ENST00000505402 SYNRGQ9UMZ2 1314 aa6.53□□□□□ -1.36
CAST-216ENST00000505402 EPB41L2O43491 1005 aaKnown RBP6.53□□□□□ -1.36
CAST-216ENST00000505402 RLBP1P12271 317 aa6.53□□□□□ -1.36
CAST-216ENST00000505402 MX1P20591 662 aa6.53□□□□□ -1.36
CAST-216ENST00000505402 GPTP24298 496 aa6.53□□□□□ -1.36
CAST-216ENST00000505402 NF2P35240 595 aa6.53□□□□□ -1.36
CAST-216ENST00000505402 SFSWAPQ12872 951 aaKnown RBP6.53□□□□□ -1.36
CAST-216ENST00000505402 DDX46Q7L014 1031 aaKnown RBP6.53□□□□□ -1.36
CAST-216ENST00000505402 SLF2Q8IX21 1173 aa6.53□□□□□ -1.36
CAST-216ENST00000505402 MPNDQ8N594 471 aa6.53□□□□□ -1.36
CAST-216ENST00000505402 MAB21L3Q8N8X9 362 aa6.53□□□□□ -1.36
CAST-216ENST00000505402 MIPOL1Q8TD10 442 aa6.53□□□□□ -1.36
CAST-216ENST00000505402 ZNF483Q8TF39 744 aaPredicted RBP6.53□□□□□ -1.36
CAST-216ENST00000505402 HNRNPLLQ8WVV9 542 aaKnown RBP6.53□□□□□ -1.36
CAST-216ENST00000505402 RMDN2Q96LZ7 410 aa6.53□□□□□ -1.36
CAST-216ENST00000505402 CRACR2AQ9BSW2 395 aa6.53□□□□□ -1.36
CAST-216ENST00000505402 IQCGQ9H095 443 aaKnown RBP6.53□□□□□ -1.36
CAST-216ENST00000505402 ACBD3Q9H3P7 528 aa6.53□□□□□ -1.36
CAST-216ENST00000505402 IL21Q9HBE4 155 aa6.53□□□□□ -1.36
CAST-216ENST00000505402 ABCF2Q9UG63 623 aa6.53□□□□□ -1.36
CAST-216ENST00000505402 ADAM21Q9UKJ8 722 aa6.53□□□□□ -1.36
CAST-216ENST00000505402 ZNF215Q9UL58 517 aaPredicted RBP6.53□□□□□ -1.36
CAST-216ENST00000505402 PYCARDQ9ULZ3 195 aa6.53□□□□□ -1.36
CAST-216ENST00000505402 ADGRG1Q9Y653 693 aa6.53□□□□□ -1.36
CAST-216ENST00000505402 POLR3AO14802 1390 aaPredicted RBP6.53□□□□□ -1.36
CAST-216ENST00000505402 ARHGEF11O15085 1522 aa6.52□□□□□ -1.37
CAST-216ENST00000505402 EHBP1L1Q8N3D4 1523 aa6.52□□□□□ -1.37
CAST-216ENST00000505402 FAM135AQ9P2D6 1515 aa6.52□□□□□ -1.37
CAST-216ENST00000505402 EFCAB8A8MWE9 144 aa6.52□□□□□ -1.37
CAST-216ENST00000505402 ZMYND10O75800 440 aa6.52□□□□□ -1.37
CAST-216ENST00000505402 ERLIN2O94905 339 aa6.52□□□□□ -1.37
CAST-216ENST00000505402 BRD1O95696 1058 aa6.52□□□□□ -1.37
CAST-216ENST00000505402 HNRNPH1P31943 449 aaKnown RBP6.52□□□□□ -1.37
CAST-216ENST00000505402 LMNB2Q03252 620 aa6.52□□□□□ -1.37
CAST-216ENST00000505402 TBC1D8BQ0IIM8 1120 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms