RNA–Protein interactions for RNA: ENST00000505346.5

SMN2-205, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 3

Gene SMN2, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-205ENST00000505346 STAG2Q8N3U4 1231 aa7.6□□□□□ -1.19
SMN2-205ENST00000505346 C2orf49Q9BVC5 232 aaPredicted RBP7.6□□□□□ -1.19
SMN2-205ENST00000505346 SMG9Q9H0W8 520 aaKnown RBP7.6□□□□□ -1.19
SMN2-205ENST00000505346 STOML1Q9UBI4 398 aa7.6□□□□□ -1.19
SMN2-205ENST00000505346 KIAA1024Q9UPX6 916 aa7.6□□□□□ -1.19
SMN2-205ENST00000505346 PALM3A6NDB9 673 aaPredicted RBP7.59□□□□□ -1.19
SMN2-205ENST00000505346 ZBTB42B2RXF5 422 aa7.59□□□□□ -1.19
SMN2-205ENST00000505346 TGFBR3LH3BV60 316 aa7.59□□□□□ -1.19
SMN2-205ENST00000505346 GLB1P16278 677 aa7.59□□□□□ -1.19
SMN2-205ENST00000505346 GRIK1P39086 918 aa7.59□□□□□ -1.19
SMN2-205ENST00000505346 MLLT1Q03111 559 aaPredicted RBP7.59□□□□□ -1.19
SMN2-205ENST00000505346 PLAURQ03405 335 aa7.59□□□□□ -1.19
SMN2-205ENST00000505346 KRT25Q7Z3Z0 450 aa7.59□□□□□ -1.19
SMN2-205ENST00000505346 LARGE2Q8N3Y3 721 aa7.59□□□□□ -1.19
SMN2-205ENST00000505346 TSEN2Q8NCE0 465 aaKnown RBP7.59□□□□□ -1.19
SMN2-205ENST00000505346 GAS2L2Q8NHY3 880 aa7.59□□□□□ -1.19
SMN2-205ENST00000505346 CHMP7Q8WUX9 453 aaPredicted RBP7.59□□□□□ -1.19
SMN2-205ENST00000505346 COG6Q9Y2V7 657 aa7.59□□□□□ -1.19
SMN2-205ENST00000505346 TGFB1P01137 390 aa7.58□□□□□ -1.2
SMN2-205ENST00000505346 CLDN10P78369 228 aa7.58□□□□□ -1.2
SMN2-205ENST00000505346 INTS5Q6P9B9 1019 aaKnown RBP7.58□□□□□ -1.2
SMN2-205ENST00000505346 C21orf2O43822 256 aa7.57□□□□□ -1.2
SMN2-205ENST00000505346 TARSP26639 723 aaKnown RBP7.57□□□□□ -1.2
SMN2-205ENST00000505346 GPLD1P80108 840 aa7.57□□□□□ -1.2
SMN2-205ENST00000505346 RTN1Q16799 776 aa7.57□□□□□ -1.2
SMN2-205ENST00000505346 OGFOD1Q8N543 542 aa7.57□□□□□ -1.2
SMN2-205ENST00000505346 SRA1Q9HD15 236 aaKnown RBP7.57□□□□□ -1.2
SMN2-205ENST00000505346 ZFATQ9P243 1243 aa7.57□□□□□ -1.2
SMN2-205ENST00000505346 DHX15O43143 795 aaKnown RBP7.56□□□□□ -1.2
SMN2-205ENST00000505346 RARAP10276 462 aa7.56□□□□□ -1.2
SMN2-205ENST00000505346 EIF2AK2P19525 551 aaKnown RBP7.56□□□□□ -1.2
SMN2-205ENST00000505346 HFE2Q6ZVN8 426 aa7.56□□□□□ -1.2
SMN2-205ENST00000505346 MAP4K3Q8IVH8 894 aa7.56□□□□□ -1.2
SMN2-205ENST00000505346 SCG3Q8WXD2 468 aaKnown RBP7.56□□□□□ -1.2
SMN2-205ENST00000505346 C11orf16Q9NQ32 467 aa7.56□□□□□ -1.2
SMN2-205ENST00000505346 DMGDHQ9UI17 866 aaKnown RBP7.56□□□□□ -1.2
SMN2-205ENST00000505346 UBTFP17480 764 aaKnown RBP7.55□□□□□ -1.2
SMN2-205ENST00000505346 PLEKHM2Q8IWE5 1019 aa7.55□□□□□ -1.2
SMN2-205ENST00000505346 IL22RA1Q8N6P7 574 aa7.55□□□□□ -1.2
SMN2-205ENST00000505346 USP17L3A6NCW0 530 aa7.54□□□□□ -1.2
SMN2-205ENST00000505346 USP17L4A6NCW7 530 aa7.54□□□□□ -1.2
SMN2-205ENST00000505346 SASH3O75995 380 aa7.54□□□□□ -1.2
SMN2-205ENST00000505346 WNT11O96014 354 aa7.54□□□□□ -1.2
SMN2-205ENST00000505346 INPP5BP32019 993 aa7.54□□□□□ -1.2
SMN2-205ENST00000505346 NRLP54845 237 aa7.54□□□□□ -1.2
SMN2-205ENST00000505346 GDF6Q6KF10 455 aaPredicted RBP7.54□□□□□ -1.2
SMN2-205ENST00000505346 USP17L2Q6R6M4 530 aa7.54□□□□□ -1.2
SMN2-205ENST00000505346 USP17L1Q7RTZ2 530 aa7.54□□□□□ -1.2
SMN2-205ENST00000505346 IFT43Q96FT9 208 aa7.54□□□□□ -1.2
SMN2-205ENST00000505346 IDH3AP50213 366 aa7.53□□□□□ -1.2
SMN2-205ENST00000505346 Q6ZS46 218 aa7.53□□□□□ -1.2
SMN2-205ENST00000505346 SIX5Q8N196 739 aa7.53□□□□□ -1.2
SMN2-205ENST00000505346 AGGF1Q8N302 714 aaeCLIP7.53□□□□□ -1.2
SMN2-205ENST00000505346 PLD4Q96BZ4 506 aa7.53□□□□□ -1.2
SMN2-205ENST00000505346 ZNF594Q96JF6 807 aaPredicted RBP7.53□□□□□ -1.2
SMN2-205ENST00000505346 MKRN1Q9UHC7 482 aaKnown RBP7.53□□□□□ -1.2
SMN2-205ENST00000505346 BCS1LQ9Y276 419 aa7.53□□□□□ -1.2
SMN2-205ENST00000505346 NFIAQ12857 509 aa7.52□□□□□ -1.21
SMN2-205ENST00000505346 ZDHHC13Q8IUH4 622 aa7.52□□□□□ -1.21
SMN2-205ENST00000505346 RBSNQ9H1K0 784 aa7.52□□□□□ -1.21
SMN2-205ENST00000505346 ADAMTS4O75173 837 aa7.51□□□□□ -1.21
SMN2-205ENST00000505346 GHRHP01286 108 aa7.51□□□□□ -1.21
SMN2-205ENST00000505346 SPINK2P20155 84 aa7.51□□□□□ -1.21
SMN2-205ENST00000505346 GRNP28799 593 aaKnown RBP7.51□□□□□ -1.21
SMN2-205ENST00000505346 ARSDP51689 593 aa7.51□□□□□ -1.21
SMN2-205ENST00000505346 SETDB1Q15047 1291 aa7.51□□□□□ -1.21
SMN2-205ENST00000505346 UBL7Q96S82 380 aaPredicted RBP7.51□□□□□ -1.21
SMN2-205ENST00000505346 CEP41Q9BYV8 373 aa7.51□□□□□ -1.21
SMN2-205ENST00000505346 MUC3BQ9H195 1237 aa7.51□□□□□ -1.21
SMN2-205ENST00000505346 TLR7Q9NYK1 1049 aaKnown RBP7.51□□□□□ -1.21
SMN2-205ENST00000505346 LOC102724428A0A0B4J2F2 783 aa7.5□□□□□ -1.21
SMN2-205ENST00000505346 SIK1P57059 783 aa7.5□□□□□ -1.21
SMN2-205ENST00000505346 DTX1Q86Y01 620 aa7.5□□□□□ -1.21
SMN2-205ENST00000505346 HINFPQ9BQA5 517 aa7.5□□□□□ -1.21
SMN2-205ENST00000505346 J3QW42 95 aa7.49□□□□□ -1.21
SMN2-205ENST00000505346 SEC13P55735 322 aa7.49□□□□□ -1.21
SMN2-205ENST00000505346 HDGFL1Q5TGJ6 251 aa7.49□□□□□ -1.21
SMN2-205ENST00000505346 CACTIN-AS1Q8N1I8 211 aa7.49□□□□□ -1.21
SMN2-205ENST00000505346 POM121Q96HA1 1249 aa7.49□□□□□ -1.21
SMN2-205ENST00000505346 ATP9BO43861 1147 aa7.48□□□□□ -1.21
SMN2-205ENST00000505346 PSAPP07602 524 aa7.48□□□□□ -1.21
SMN2-205ENST00000505346 RASA1P20936 1047 aa7.48□□□□□ -1.21
SMN2-205ENST00000505346 RNF43Q68DV7 783 aa7.48□□□□□ -1.21
SMN2-205ENST00000505346 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.48□□□□□ -1.21
SMN2-205ENST00000505346 UTP4Q969X6 686 aaKnown RBP7.48□□□□□ -1.21
SMN2-205ENST00000505346 DBNDD2Q9BQY9 259 aa7.48□□□□□ -1.21
SMN2-205ENST00000505346 KLK14Q9P0G3 267 aa7.48□□□□□ -1.21
SMN2-205ENST00000505346 MICAL2O94851 1124 aa7.47□□□□□ -1.21
SMN2-205ENST00000505346 TMEM132AQ24JP5 1023 aa7.47□□□□□ -1.21
SMN2-205ENST00000505346 UVSSAQ2YD98 709 aa7.47□□□□□ -1.21
SMN2-205ENST00000505346 TRIM42Q8IWZ5 723 aa7.47□□□□□ -1.21
SMN2-205ENST00000505346 ARMC10Q8N2F6 343 aa7.47□□□□□ -1.21
SMN2-205ENST00000505346 C7orf69Q9H7B7 122 aa7.47□□□□□ -1.21
SMN2-205ENST00000505346 PPME1Q9Y570 386 aa7.47□□□□□ -1.21
SMN2-205ENST00000505346 DGKZQ13574 1117 aa7.46□□□□□ -1.22
SMN2-205ENST00000505346 ADGRE2Q9UHX3 823 aa7.46□□□□□ -1.22
SMN2-205ENST00000505346 HMX2A2RU54 273 aa7.45□□□□□ -1.22
SMN2-205ENST00000505346 PRR19A6NJB7 356 aa7.45□□□□□ -1.22
SMN2-205ENST00000505346 DKK1O94907 266 aa7.45□□□□□ -1.22
SMN2-205ENST00000505346 RTCBQ9Y3I0 505 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms