RNA–Protein interactions for RNA: ENST00000505218.1

GAPDHP40-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 40, humanhuman

BASIC

Gene GAPDHP40, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP40-201ENST00000505218 TGFB2P61812 414 aa19.43■□□□□ 0.7
GAPDHP40-201ENST00000505218 EXOC6Q8TAG9 804 aa19.43■□□□□ 0.7
GAPDHP40-201ENST00000505218 KIAA1551Q9HCM1 1747 aa19.42■□□□□ 0.7
GAPDHP40-201ENST00000505218 RFX5P48382 616 aaPredicted RBP19.41■□□□□ 0.7
GAPDHP40-201ENST00000505218 LMBR1LQ6UX01 489 aa19.41■□□□□ 0.7
GAPDHP40-201ENST00000505218 ATP8B2P98198 1209 aa19.4■□□□□ 0.7
GAPDHP40-201ENST00000505218 POLA2Q14181 598 aa19.4■□□□□ 0.7
GAPDHP40-201ENST00000505218 CEP85Q6P2H3 762 aa19.4■□□□□ 0.7
GAPDHP40-201ENST00000505218 SIRT2Q8IXJ6 389 aa19.4■□□□□ 0.7
GAPDHP40-201ENST00000505218 SRCAPQ6ZRS2 3230 aa19.4■□□□□ 0.7
GAPDHP40-201ENST00000505218 NPHP1O15259 732 aa19.39■□□□□ 0.69
GAPDHP40-201ENST00000505218 NPR1P16066 1061 aa19.39■□□□□ 0.69
GAPDHP40-201ENST00000505218 CCDC152Q4G0S7 254 aa19.39■□□□□ 0.69
GAPDHP40-201ENST00000505218 STYK1Q6J9G0 422 aa19.39■□□□□ 0.69
GAPDHP40-201ENST00000505218 CRAMP1Q96RY5 1269 aa19.39■□□□□ 0.69
GAPDHP40-201ENST00000505218 GREM2Q9H772 168 aa19.39■□□□□ 0.69
GAPDHP40-201ENST00000505218 C1orf115Q9H7X2 142 aa19.39■□□□□ 0.69
GAPDHP40-201ENST00000505218 IRX6P78412 446 aaPredicted RBP19.38■□□□□ 0.69
GAPDHP40-201ENST00000505218 C2CD5Q86YS7 1000 aa19.38■□□□□ 0.69
GAPDHP40-201ENST00000505218 RPAP2Q8IXW5 612 aaPredicted RBP19.38■□□□□ 0.69
GAPDHP40-201ENST00000505218 SSH3Q8TE77 659 aa19.38■□□□□ 0.69
GAPDHP40-201ENST00000505218 MASTLQ96GX5 879 aa19.38■□□□□ 0.69
GAPDHP40-201ENST00000505218 PCDHB15Q9Y5E8 787 aa19.38■□□□□ 0.69
GAPDHP40-201ENST00000505218 COL11A2P13942 1736 aaPredicted RBP19.37■□□□□ 0.69
GAPDHP40-201ENST00000505218 COL4A1P02462 1669 aa19.37■□□□□ 0.69
GAPDHP40-201ENST00000505218 H0YIN7 160 aa19.37■□□□□ 0.69
GAPDHP40-201ENST00000505218 DPEP1P16444 411 aa19.37■□□□□ 0.69
GAPDHP40-201ENST00000505218 CHRNA5P30532 468 aa19.37■□□□□ 0.69
GAPDHP40-201ENST00000505218 FAM161AQ3B820 660 aa19.37■□□□□ 0.69
GAPDHP40-201ENST00000505218 FHDC1Q9C0D6 1143 aaPredicted RBP19.37■□□□□ 0.69
GAPDHP40-201ENST00000505218 SEC31BQ9NQW1 1179 aa19.37■□□□□ 0.69
GAPDHP40-201ENST00000505218 PNMA6EA0A0J9YXQ4 647 aa19.36■□□□□ 0.69
GAPDHP40-201ENST00000505218 SYT17Q9BSW7 474 aa19.36■□□□□ 0.69
GAPDHP40-201ENST00000505218 A0A0G2JLW4 131 aa19.35■□□□□ 0.69
GAPDHP40-201ENST00000505218 ITGA6P23229 1130 aa19.35■□□□□ 0.69
GAPDHP40-201ENST00000505218 PTPN12Q05209 780 aaKnown RBP19.35■□□□□ 0.69
GAPDHP40-201ENST00000505218 GRAPQ13588 217 aa19.35■□□□□ 0.69
GAPDHP40-201ENST00000505218 NLGN2Q8NFZ4 835 aa19.35■□□□□ 0.69
GAPDHP40-201ENST00000505218 GRAPLQ8TC17 118 aaPredicted RBP19.35■□□□□ 0.69
GAPDHP40-201ENST00000505218 RBM17Q96I25 401 aaKnown RBP19.35■□□□□ 0.69
GAPDHP40-201ENST00000505218 C7orf43Q8WVR3 580 aa19.34■□□□□ 0.69
GAPDHP40-201ENST00000505218 CELF1Q92879 486 aaKnown RBP19.34■□□□□ 0.69
GAPDHP40-201ENST00000505218 COPRSQ9NQ92 184 aa19.34■□□□□ 0.69
GAPDHP40-201ENST00000505218 DLEC1Q9Y238 1755 aa19.34■□□□□ 0.69
GAPDHP40-201ENST00000505218 MYH3P11055 1940 aa19.33■□□□□ 0.69
GAPDHP40-201ENST00000505218 IFIT5Q13325 482 aaKnown RBP19.33■□□□□ 0.68
GAPDHP40-201ENST00000505218 ERICH6BQ5W0A0 696 aa19.33■□□□□ 0.68
GAPDHP40-201ENST00000505218 DDX46Q7L014 1031 aaKnown RBP19.33■□□□□ 0.68
GAPDHP40-201ENST00000505218 RPGRQ92834 1020 aaKnown RBP19.33■□□□□ 0.68
GAPDHP40-201ENST00000505218 CCDC85AQ96PX6 553 aaPredicted RBP19.33■□□□□ 0.68
GAPDHP40-201ENST00000505218 ANKRD18BA2A2Z9 1011 aa19.32■□□□□ 0.68
GAPDHP40-201ENST00000505218 SRGAP3O43295 1099 aa19.32■□□□□ 0.68
GAPDHP40-201ENST00000505218 BBOX1O75936 387 aa19.32■□□□□ 0.68
GAPDHP40-201ENST00000505218 ALDH1B1P30837 517 aa19.32■□□□□ 0.68
GAPDHP40-201ENST00000505218 RPS8P62241 208 aaKnown RBP19.32■□□□□ 0.68
GAPDHP40-201ENST00000505218 CCDC57Q2TAC2 916 aa19.32■□□□□ 0.68
GAPDHP40-201ENST00000505218 CNKSR1Q969H4 720 aa19.32■□□□□ 0.68
GAPDHP40-201ENST00000505218 FBXO3Q9UK99 471 aa19.32■□□□□ 0.68
GAPDHP40-201ENST00000505218 NOP58Q9Y2X3 529 aaKnown RBP19.32■□□□□ 0.68
GAPDHP40-201ENST00000505218 SNED1Q8TER0 1413 aa19.32■□□□□ 0.68
GAPDHP40-201ENST00000505218 HDAC1Q13547 482 aaPredicted RBP19.31■□□□□ 0.68
GAPDHP40-201ENST00000505218 CDC5LQ99459 802 aaKnown RBP19.31■□□□□ 0.68
GAPDHP40-201ENST00000505218 BSDC1Q9NW68 430 aaPredicted RBP19.31■□□□□ 0.68
GAPDHP40-201ENST00000505218 TMC4Q7Z404 712 aa19.3■□□□□ 0.68
GAPDHP40-201ENST00000505218 PIM2Q9P1W9 311 aa19.3■□□□□ 0.68
GAPDHP40-201ENST00000505218 PPP1R1BQ9UD71 204 aaPredicted RBP19.3■□□□□ 0.68
GAPDHP40-201ENST00000505218 RIPOR2Q9Y4F9 1068 aa19.3■□□□□ 0.68
GAPDHP40-201ENST00000505218 CIAO1O76071 339 aa19.29■□□□□ 0.68
GAPDHP40-201ENST00000505218 PRPF40BQ6NWY9 871 aaKnown RBP19.29■□□□□ 0.68
GAPDHP40-201ENST00000505218 ATG9AQ7Z3C6 839 aa19.29■□□□□ 0.68
GAPDHP40-201ENST00000505218 ANKRD18AQ8IVF6 992 aa19.29■□□□□ 0.68
GAPDHP40-201ENST00000505218 TTLL6Q8N841 843 aa19.29■□□□□ 0.68
GAPDHP40-201ENST00000505218 KLHDC4Q8TBB5 520 aa19.29■□□□□ 0.68
GAPDHP40-201ENST00000505218 ZNF622Q969S3 477 aaKnown RBP eCLIP19.29■□□□□ 0.68
GAPDHP40-201ENST00000505218 ZNF594Q96JF6 807 aaPredicted RBP19.29■□□□□ 0.68
GAPDHP40-201ENST00000505218 BRCA1P38398 1863 aaKnown RBP19.28■□□□□ 0.68
GAPDHP40-201ENST00000505218 PUS3Q9BZE2 481 aaKnown RBP19.28■□□□□ 0.68
GAPDHP40-201ENST00000505218 PA2G4Q9UQ80 394 aaKnown RBP19.28■□□□□ 0.68
GAPDHP40-201ENST00000505218 CHMP3Q9Y3E7 222 aa19.28■□□□□ 0.68
GAPDHP40-201ENST00000505218 EYA2O00167 538 aa19.27■□□□□ 0.68
GAPDHP40-201ENST00000505218 HMMRO75330 724 aa19.27■□□□□ 0.68
GAPDHP40-201ENST00000505218 SLC51AQ86UW1 340 aa19.27■□□□□ 0.68
GAPDHP40-201ENST00000505218 SP8Q8IXZ3 490 aa19.27■□□□□ 0.68
GAPDHP40-201ENST00000505218 ATP6V0A2Q9Y487 856 aa19.27■□□□□ 0.68
GAPDHP40-201ENST00000505218 PPEF1O14829 653 aaPredicted RBP19.26■□□□□ 0.67
GAPDHP40-201ENST00000505218 NEFLP07196 543 aa19.26■□□□□ 0.67
GAPDHP40-201ENST00000505218 IGHMBP2P38935 993 aaKnown RBP19.26■□□□□ 0.67
GAPDHP40-201ENST00000505218 LRRC24Q50LG9 513 aa19.26■□□□□ 0.67
GAPDHP40-201ENST00000505218 DCTPP1Q9H773 170 aa19.26■□□□□ 0.67
GAPDHP40-201ENST00000505218 MINPP1Q9UNW1 487 aa19.26■□□□□ 0.67
GAPDHP40-201ENST00000505218 LRRC37AA6NMS7 1700 aa19.25■□□□□ 0.67
GAPDHP40-201ENST00000505218 DALRD3Q5D0E6 543 aaKnown RBP19.25■□□□□ 0.67
GAPDHP40-201ENST00000505218 LDHAL6AQ6ZMR3 332 aa19.25■□□□□ 0.67
GAPDHP40-201ENST00000505218 KLHL34Q8N239 644 aa19.25■□□□□ 0.67
GAPDHP40-201ENST00000505218 VGLL2Q8N8G2 317 aa19.25■□□□□ 0.67
GAPDHP40-201ENST00000505218 SLX4Q8IY92 1834 aa19.25■□□□□ 0.67
GAPDHP40-201ENST00000505218 IGHDP01880 384 aa19.24■□□□□ 0.67
GAPDHP40-201ENST00000505218 CC2D2BQ6DHV5 1058 aa19.24■□□□□ 0.67
GAPDHP40-201ENST00000505218 PODXL2Q9NZ53 605 aa19.24■□□□□ 0.67
GAPDHP40-201ENST00000505218 TAF1P21675 1872 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms