RNA–Protein interactions for RNA: ENST00000505199.5

SNCA-208, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-208ENST00000505199 DDX46Q7L014 1031 aaKnown RBP15.69■□□□□ 0.1
SNCA-208ENST00000505199 CHRNA5P30532 468 aa15.68■□□□□ 0.1
SNCA-208ENST00000505199 RABL6Q3YEC7 729 aaPredicted RBP15.68■□□□□ 0.1
SNCA-208ENST00000505199 TTLL11Q8NHH1 800 aa15.68■□□□□ 0.1
SNCA-208ENST00000505199 NBPF7P0C2Y1 421 aaPredicted RBP15.67■□□□□ 0.1
SNCA-208ENST00000505199 SYNE4Q8N205 404 aa15.67■□□□□ 0.1
SNCA-208ENST00000505199 CDC5LQ99459 802 aaKnown RBP15.67■□□□□ 0.1
SNCA-208ENST00000505199 UBTFL1P0CB47 393 aaPredicted RBP15.66■□□□□ 0.1
SNCA-208ENST00000505199 GRAPQ13588 217 aa15.66■□□□□ 0.1
SNCA-208ENST00000505199 PRPF40BQ6NWY9 871 aaKnown RBP15.66■□□□□ 0.1
SNCA-208ENST00000505199 CCDC24Q8N4L8 307 aa15.66■□□□□ 0.1
SNCA-208ENST00000505199 GRAPLQ8TC17 118 aaPredicted RBP15.66■□□□□ 0.1
SNCA-208ENST00000505199 ZNF622Q969S3 477 aaKnown RBP eCLIP15.66■□□□□ 0.1
SNCA-208ENST00000505199 DDX19BQ9UMR2 479 aa15.66■□□□□ 0.1
SNCA-208ENST00000505199 FOXO4P98177 505 aa15.65■□□□□ 0.1
SNCA-208ENST00000505199 TMEM57Q8N5G2 664 aa15.65■□□□□ 0.1
SNCA-208ENST00000505199 C7orf43Q8WVR3 580 aa15.65■□□□□ 0.1
SNCA-208ENST00000505199 TMX4Q9H1E5 349 aaPredicted RBP15.65■□□□□ 0.1
SNCA-208ENST00000505199 LRRC37AA6NMS7 1700 aa15.64■□□□□ 0.09
SNCA-208ENST00000505199 MTX1Q13505 466 aa15.64■□□□□ 0.09
SNCA-208ENST00000505199 AAMPQ13685 434 aa15.64■□□□□ 0.09
SNCA-208ENST00000505199 RTL5Q5HYW3 569 aaPredicted RBP15.64■□□□□ 0.09
SNCA-208ENST00000505199 C3orf67Q6ZVT6 689 aa15.64■□□□□ 0.09
SNCA-208ENST00000505199 RTKN2Q8IZC4 609 aa15.64■□□□□ 0.09
SNCA-208ENST00000505199 CLUAP1Q96AJ1 413 aa15.64■□□□□ 0.09
SNCA-208ENST00000505199 BCS1LQ9Y276 419 aa15.64■□□□□ 0.09
SNCA-208ENST00000505199 LTBP3Q9NS15 1303 aa15.64■□□□□ 0.09
SNCA-208ENST00000505199 SLX4Q8IY92 1834 aa15.64■□□□□ 0.09
SNCA-208ENST00000505199 RRP1P56182 461 aaKnown RBP15.63■□□□□ 0.09
SNCA-208ENST00000505199 RPS8P62241 208 aaKnown RBP15.63■□□□□ 0.09
SNCA-208ENST00000505199 MVPQ14764 893 aaKnown RBP15.63■□□□□ 0.09
SNCA-208ENST00000505199 GPR162Q16538 588 aa15.63■□□□□ 0.09
SNCA-208ENST00000505199 SP8Q8IXZ3 490 aa15.63■□□□□ 0.09
SNCA-208ENST00000505199 KAZALD1Q96I82 304 aa15.63■□□□□ 0.09
SNCA-208ENST00000505199 FBXO3Q9UK99 471 aa15.63■□□□□ 0.09
SNCA-208ENST00000505199 ATP6V0A2Q9Y487 856 aa15.63■□□□□ 0.09
SNCA-208ENST00000505199 PPEF1O14829 653 aaPredicted RBP15.62■□□□□ 0.09
SNCA-208ENST00000505199 ZBTB7BO15156 539 aaPredicted RBP15.62■□□□□ 0.09
SNCA-208ENST00000505199 GNAI2P04899 355 aa15.62■□□□□ 0.09
SNCA-208ENST00000505199 RLBP1P12271 317 aa15.62■□□□□ 0.09
SNCA-208ENST00000505199 IFIT5Q13325 482 aaKnown RBP15.62■□□□□ 0.09
SNCA-208ENST00000505199 ITPRIPQ8IWB1 547 aa15.62■□□□□ 0.09
SNCA-208ENST00000505199 VPS33BQ9H267 617 aa15.62■□□□□ 0.09
SNCA-208ENST00000505199 BSDC1Q9NW68 430 aaPredicted RBP15.62■□□□□ 0.09
SNCA-208ENST00000505199 SNED1Q8TER0 1413 aa15.61■□□□□ 0.09
SNCA-208ENST00000505199 FER1L6Q2WGJ9 1857 aa15.61■□□□□ 0.09
SNCA-208ENST00000505199 GOLGB1Q14789 3259 aaKnown RBP15.61■□□□□ 0.09
SNCA-208ENST00000505199 ANKRD18BA2A2Z9 1011 aa15.61■□□□□ 0.09
SNCA-208ENST00000505199 YBX3P16989 372 aaKnown RBP eCLIP15.61■□□□□ 0.09
SNCA-208ENST00000505199 ITGA6P23229 1130 aa15.61■□□□□ 0.09
SNCA-208ENST00000505199 CCDC57Q2TAC2 916 aa15.61■□□□□ 0.09
SNCA-208ENST00000505199 CCDC93Q567U6 631 aa15.61■□□□□ 0.09
SNCA-208ENST00000505199 LMBR1LQ6UX01 489 aa15.61■□□□□ 0.09
SNCA-208ENST00000505199 ANKRD18AQ8IVF6 992 aa15.61■□□□□ 0.09
SNCA-208ENST00000505199 SUCLG2Q96I99 432 aa15.61■□□□□ 0.09
SNCA-208ENST00000505199 PSMD1Q99460 953 aa15.61■□□□□ 0.09
SNCA-208ENST00000505199 MEIS3Q99687 375 aa15.61■□□□□ 0.09
SNCA-208ENST00000505199 BICC1Q9H694 974 aaKnown RBP15.61■□□□□ 0.09
SNCA-208ENST00000505199 GREM2Q9H772 168 aa15.61■□□□□ 0.09
SNCA-208ENST00000505199 IGHMBP2P38935 993 aaKnown RBP15.6■□□□□ 0.09
SNCA-208ENST00000505199 CACNA1SQ13698 1873 aa15.59■□□□□ 0.09
SNCA-208ENST00000505199 FAM161AQ3B820 660 aa15.59■□□□□ 0.09
SNCA-208ENST00000505199 ANKRD44Q8N8A2 993 aa15.59■□□□□ 0.09
SNCA-208ENST00000505199 PANK1Q8TE04 598 aa15.59■□□□□ 0.09
SNCA-208ENST00000505199 JARID2Q92833 1246 aaPredicted RBP15.59■□□□□ 0.09
SNCA-208ENST00000505199 PODXL2Q9NZ53 605 aa15.59■□□□□ 0.09
SNCA-208ENST00000505199 ZC3H4Q9UPT8 1303 aaKnown RBP15.59■□□□□ 0.09
SNCA-208ENST00000505199 EPHA10Q5JZY3 1008 aa15.58■□□□□ 0.08
SNCA-208ENST00000505199 SUPT20HQ8NEM7 779 aa15.58■□□□□ 0.08
SNCA-208ENST00000505199 CELF1Q92879 486 aaKnown RBP15.58■□□□□ 0.08
SNCA-208ENST00000505199 MPHOSPH8Q99549 860 aa15.58■□□□□ 0.08
SNCA-208ENST00000505199 RTFDC1Q9BY42 306 aaPredicted RBP15.58■□□□□ 0.08
SNCA-208ENST00000505199 TNNQ9UQP3 1299 aa15.58■□□□□ 0.08
SNCA-208ENST00000505199 LRRFIP2Q9Y608 721 aaKnown RBP15.58■□□□□ 0.08
SNCA-208ENST00000505199 CHD4Q14839 1912 aa15.57■□□□□ 0.08
SNCA-208ENST00000505199 C21orf2O43822 256 aa15.57■□□□□ 0.08
SNCA-208ENST00000505199 PLIN1O60240 522 aa15.57■□□□□ 0.08
SNCA-208ENST00000505199 TAOK3Q9H2K8 898 aa15.57■□□□□ 0.08
SNCA-208ENST00000505199 SEC31BQ9NQW1 1179 aa15.57■□□□□ 0.08
SNCA-208ENST00000505199 ZBTB40Q9NUA8 1239 aa15.57■□□□□ 0.08
SNCA-208ENST00000505199 LTBP1Q14766 1721 aa15.57■□□□□ 0.08
SNCA-208ENST00000505199 FKBP4Q02790 459 aaKnown RBP eCLIP15.56■□□□□ 0.08
SNCA-208ENST00000505199 RPAP2Q8IXW5 612 aaPredicted RBP15.56■□□□□ 0.08
SNCA-208ENST00000505199 ANKRD2Q9GZV1 360 aa15.56■□□□□ 0.08
SNCA-208ENST00000505199 COPRSQ9NQ92 184 aa15.56■□□□□ 0.08
SNCA-208ENST00000505199 XDHP47989 1333 aa15.55■□□□□ 0.08
SNCA-208ENST00000505199 CIAO1O76071 339 aa15.55■□□□□ 0.08
SNCA-208ENST00000505199 PELP1Q8IZL8 1130 aaKnown RBP15.55■□□□□ 0.08
SNCA-208ENST00000505199 COG6Q9Y2V7 657 aa15.55■□□□□ 0.08
SNCA-208ENST00000505199 CHMP3Q9Y3E7 222 aa15.55■□□□□ 0.08
SNCA-208ENST00000505199 UTRNP46939 3433 aa15.55■□□□□ 0.08
SNCA-208ENST00000505199 TAF1P21675 1872 aa15.54■□□□□ 0.08
SNCA-208ENST00000505199 MROH5Q6ZUA9 1318 aa15.54■□□□□ 0.08
SNCA-208ENST00000505199 LMNB1P20700 586 aa15.54■□□□□ 0.08
SNCA-208ENST00000505199 TAF7LQ5H9L4 462 aa15.54■□□□□ 0.08
SNCA-208ENST00000505199 LDHAL6AQ6ZMR3 332 aa15.54■□□□□ 0.08
SNCA-208ENST00000505199 ARHGAP27Q6ZUM4 889 aa15.54■□□□□ 0.08
SNCA-208ENST00000505199 MPNDQ8N594 471 aa15.54■□□□□ 0.08
SNCA-208ENST00000505199 LEMD3Q9Y2U8 911 aa15.54■□□□□ 0.08
SNCA-208ENST00000505199 SBF1O95248 1867 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms