RNA–Protein interactions for RNA: ENST00000504884.6

SNCAIP-207, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-207ENST00000504884 MED23Q9ULK4 1368 aa18.54■□□□□ 0.56
SNCAIP-207ENST00000504884 AK2P54819 239 aa18.54■□□□□ 0.56
SNCAIP-207ENST00000504884 TIMM10P62072 90 aa18.54■□□□□ 0.56
SNCAIP-207ENST00000504884 EDC3Q96F86 508 aaKnown RBP18.54■□□□□ 0.56
SNCAIP-207ENST00000504884 FAM89AQ96GI7 184 aa18.54■□□□□ 0.56
SNCAIP-207ENST00000504884 ZNF594Q96JF6 807 aaPredicted RBP18.54■□□□□ 0.56
SNCAIP-207ENST00000504884 JAKMIP1Q96N16 626 aaKnown RBP18.54■□□□□ 0.56
SNCAIP-207ENST00000504884 CEP126Q9P2H0 1117 aa18.54■□□□□ 0.56
SNCAIP-207ENST00000504884 CYP46A1Q9Y6A2 500 aa18.54■□□□□ 0.56
SNCAIP-207ENST00000504884 CDHR2Q9BYE9 1310 aa18.53■□□□□ 0.56
SNCAIP-207ENST00000504884 ERVV-1B6SEH8 477 aa18.53■□□□□ 0.56
SNCAIP-207ENST00000504884 PSMA5P28066 241 aa18.53■□□□□ 0.56
SNCAIP-207ENST00000504884 IL6STP40189 918 aaPredicted RBP18.53■□□□□ 0.56
SNCAIP-207ENST00000504884 HLFQ16534 295 aa18.53■□□□□ 0.56
SNCAIP-207ENST00000504884 DNAJC2Q99543 621 aaKnown RBP18.53■□□□□ 0.56
SNCAIP-207ENST00000504884 KAT6BQ8WYB5 2073 aa18.53■□□□□ 0.56
SNCAIP-207ENST00000504884 MCTP1Q6DN14 999 aa18.52■□□□□ 0.56
SNCAIP-207ENST00000504884 NLRP10Q86W26 655 aa18.52■□□□□ 0.56
SNCAIP-207ENST00000504884 PDRG1Q9NUG6 133 aa18.52■□□□□ 0.56
SNCAIP-207ENST00000504884 GOLGA6L3A6NEY3 463 aa18.52■□□□□ 0.55
SNCAIP-207ENST00000504884 SLC27A2O14975 620 aa18.52■□□□□ 0.55
SNCAIP-207ENST00000504884 IFIT5Q13325 482 aaKnown RBP18.52■□□□□ 0.55
SNCAIP-207ENST00000504884 ADCK5Q3MIX3 580 aa18.52■□□□□ 0.55
SNCAIP-207ENST00000504884 RUFY3Q7L099 469 aa18.52■□□□□ 0.55
SNCAIP-207ENST00000504884 KBTBD3Q8NAB2 608 aa18.52■□□□□ 0.55
SNCAIP-207ENST00000504884 ZSCAN31Q96LW9 406 aaPredicted RBP18.52■□□□□ 0.55
SNCAIP-207ENST00000504884 AKAP2Q9Y2D5 859 aa18.52■□□□□ 0.55
SNCAIP-207ENST00000504884 ZBTB1Q9Y2K1 713 aa18.52■□□□□ 0.55
SNCAIP-207ENST00000504884 PHLPP1O60346 1717 aa18.51■□□□□ 0.55
SNCAIP-207ENST00000504884 FSD2A1L4K1 749 aa18.51■□□□□ 0.55
SNCAIP-207ENST00000504884 TOM1O60784 492 aa18.51■□□□□ 0.55
SNCAIP-207ENST00000504884 TAF5LO75529 589 aa18.51■□□□□ 0.55
SNCAIP-207ENST00000504884 BRD1O95696 1058 aa18.51■□□□□ 0.55
SNCAIP-207ENST00000504884 PUS3Q9BZE2 481 aaKnown RBP18.51■□□□□ 0.55
SNCAIP-207ENST00000504884 HMG20BQ9P0W2 317 aa18.51■□□□□ 0.55
SNCAIP-207ENST00000504884 ISY1Q9ULR0 285 aaKnown RBP18.51■□□□□ 0.55
SNCAIP-207ENST00000504884 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.51■□□□□ 0.55
SNCAIP-207ENST00000504884 WNK3Q9BYP7 1800 aa18.5■□□□□ 0.55
SNCAIP-207ENST00000504884 A0A1B0GUL7 405 aa18.5■□□□□ 0.55
SNCAIP-207ENST00000504884 TSGA10IPQ3SY00 556 aa18.5■□□□□ 0.55
SNCAIP-207ENST00000504884 MCMDC2Q4G0Z9 681 aa18.5■□□□□ 0.55
SNCAIP-207ENST00000504884 TAF7LQ5H9L4 462 aa18.5■□□□□ 0.55
SNCAIP-207ENST00000504884 JCADQ9P266 1359 aa18.5■□□□□ 0.55
SNCAIP-207ENST00000504884 SPATA31A5Q5VU36 1347 aa18.5■□□□□ 0.55
SNCAIP-207ENST00000504884 SPATA31A7Q8IWB4 1347 aa18.5■□□□□ 0.55
SNCAIP-207ENST00000504884 KLHL40Q2TBA0 621 aa18.5■□□□□ 0.55
SNCAIP-207ENST00000504884 USPL1Q5W0Q7 1092 aa18.5■□□□□ 0.55
SNCAIP-207ENST00000504884 ZNF589Q86UQ0 364 aaPredicted RBP18.5■□□□□ 0.55
SNCAIP-207ENST00000504884 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.5■□□□□ 0.55
SNCAIP-207ENST00000504884 NUTM2BA6NNL0 878 aaPredicted RBP18.49■□□□□ 0.55
SNCAIP-207ENST00000504884 NUTM2EB1AL46 878 aaPredicted RBP18.49■□□□□ 0.55
SNCAIP-207ENST00000504884 GPTP24298 496 aa18.49■□□□□ 0.55
SNCAIP-207ENST00000504884 BARGINQ6ZT62 677 aa18.49■□□□□ 0.55
SNCAIP-207ENST00000504884 DDX46Q7L014 1031 aaKnown RBP18.49■□□□□ 0.55
SNCAIP-207ENST00000504884 DZIP3Q86Y13 1208 aaKnown RBP18.49■□□□□ 0.55
SNCAIP-207ENST00000504884 NUTM2AQ8IVF1 878 aaPredicted RBP18.49■□□□□ 0.55
SNCAIP-207ENST00000504884 SH2B1Q9NRF2 756 aaPredicted RBP18.49■□□□□ 0.55
SNCAIP-207ENST00000504884 PAG1Q9NWQ8 432 aa18.49■□□□□ 0.55
SNCAIP-207ENST00000504884 NDUFB9Q9Y6M9 179 aa18.49■□□□□ 0.55
SNCAIP-207ENST00000504884 DDX49Q9Y6V7 483 aaKnown RBP18.49■□□□□ 0.55
SNCAIP-207ENST00000504884 ZNF609O15014 1411 aa18.48■□□□□ 0.55
SNCAIP-207ENST00000504884 CPA1P15085 419 aa18.48■□□□□ 0.55
SNCAIP-207ENST00000504884 LMBRD1Q9NUN5 540 aa18.48■□□□□ 0.55
SNCAIP-207ENST00000504884 IFIT1P09914 478 aaKnown RBP18.48■□□□□ 0.55
SNCAIP-207ENST00000504884 CCDC158Q5M9N0 1113 aa18.48■□□□□ 0.55
SNCAIP-207ENST00000504884 MARCH10Q8NA82 808 aaPredicted RBP18.48■□□□□ 0.55
SNCAIP-207ENST00000504884 TTLL11Q8NHH1 800 aa18.48■□□□□ 0.55
SNCAIP-207ENST00000504884 CCDC9Q9Y3X0 531 aaKnown RBP18.48■□□□□ 0.55
SNCAIP-207ENST00000504884 PALLDQ8WX93 1383 aa18.48■□□□□ 0.55
SNCAIP-207ENST00000504884 GOLIM4O00461 696 aa18.47■□□□□ 0.55
SNCAIP-207ENST00000504884 KRT32Q14532 448 aa18.47■□□□□ 0.55
SNCAIP-207ENST00000504884 ALDH8A1Q9H2A2 487 aaPredicted RBP18.47■□□□□ 0.55
SNCAIP-207ENST00000504884 HELLSQ9NRZ9 838 aa18.47■□□□□ 0.55
SNCAIP-207ENST00000504884 TRMT112Q9UI30 125 aaKnown RBP18.47■□□□□ 0.55
SNCAIP-207ENST00000504884 U3KPZ7 1027 aaPredicted RBP18.47■□□□□ 0.55
SNCAIP-207ENST00000504884 RPAP1Q9BWH6 1393 aaPredicted RBP18.47■□□□□ 0.55
SNCAIP-207ENST00000504884 NRAPQ86VF7 1730 aa18.47■□□□□ 0.55
SNCAIP-207ENST00000504884 SH3TC1Q8TE82 1336 aa18.47■□□□□ 0.55
SNCAIP-207ENST00000504884 WDR33Q9C0J8 1336 aaKnown RBP18.47■□□□□ 0.55
SNCAIP-207ENST00000504884 EIF5P55010 431 aaKnown RBP18.46■□□□□ 0.55
SNCAIP-207ENST00000504884 ANKRD1Q15327 319 aa18.46■□□□□ 0.55
SNCAIP-207ENST00000504884 BLOC1S2Q6QNY1 142 aa18.46■□□□□ 0.55
SNCAIP-207ENST00000504884 TBC1D2BQ9UPU7 963 aa18.46■□□□□ 0.55
SNCAIP-207ENST00000504884 IRS4O14654 1257 aaPredicted RBP18.46■□□□□ 0.54
SNCAIP-207ENST00000504884 PDE8AO60658 829 aa18.46■□□□□ 0.54
SNCAIP-207ENST00000504884 CTSWP56202 376 aa18.46■□□□□ 0.54
SNCAIP-207ENST00000504884 PIP4K2BP78356 416 aa18.46■□□□□ 0.54
SNCAIP-207ENST00000504884 GORABQ5T7V8 394 aa18.46■□□□□ 0.54
SNCAIP-207ENST00000504884 ZNF34Q8IZ26 560 aa18.46■□□□□ 0.54
SNCAIP-207ENST00000504884 CCDC85AQ96PX6 553 aaPredicted RBP18.46■□□□□ 0.54
SNCAIP-207ENST00000504884 ANKRD18BA2A2Z9 1011 aa18.45■□□□□ 0.54
SNCAIP-207ENST00000504884 PRPF40AO75400 957 aaKnown RBP18.45■□□□□ 0.54
SNCAIP-207ENST00000504884 ITGA6P23229 1130 aa18.45■□□□□ 0.54
SNCAIP-207ENST00000504884 ATP6V1AP38606 617 aa18.45■□□□□ 0.54
SNCAIP-207ENST00000504884 INTS5Q6P9B9 1019 aaKnown RBP18.45■□□□□ 0.54
SNCAIP-207ENST00000504884 SYNE4Q8N205 404 aa18.45■□□□□ 0.54
SNCAIP-207ENST00000504884 ACSBG1Q96GR2 724 aa18.45■□□□□ 0.54
SNCAIP-207ENST00000504884 LARP6Q9BRS8 491 aaKnown RBP18.45■□□□□ 0.54
SNCAIP-207ENST00000504884 CCDC87Q9NVE4 849 aa18.45■□□□□ 0.54
SNCAIP-207ENST00000504884 SMC3Q9UQE7 1217 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms