RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 EIF6P56537 245 aaKnown RBP17.19■□□□□ 0.34
DDX41-204ENST00000504807 AIMP1Q12904 312 aaKnown RBP17.19■□□□□ 0.34
DDX41-204ENST00000504807 MBIPQ9NS73 344 aa17.19■□□□□ 0.34
DDX41-204ENST00000504807 SCNN1DP51172 638 aa17.18■□□□□ 0.34
DDX41-204ENST00000504807 ZNF408Q9H9D4 720 aa17.18■□□□□ 0.34
DDX41-204ENST00000504807 LAMB2P55268 1798 aa17.17■□□□□ 0.34
DDX41-204ENST00000504807 GTF2E1P29083 439 aaPredicted RBP17.17■□□□□ 0.34
DDX41-204ENST00000504807 USP50Q70EL3 339 aaPredicted RBP17.17■□□□□ 0.34
DDX41-204ENST00000504807 NYXQ9GZU5 481 aa17.17■□□□□ 0.34
DDX41-204ENST00000504807 HOXA10P31260 410 aaPredicted RBP17.16■□□□□ 0.34
DDX41-204ENST00000504807 HDGFL1Q5TGJ6 251 aa17.15■□□□□ 0.34
DDX41-204ENST00000504807 DUSP27Q5VZP5 1158 aa17.15■□□□□ 0.34
DDX41-204ENST00000504807 NLRP10Q86W26 655 aa17.15■□□□□ 0.34
DDX41-204ENST00000504807 GCC1Q96CN9 775 aa17.15■□□□□ 0.34
DDX41-204ENST00000504807 HHIPL1Q96JK4 782 aa17.15■□□□□ 0.34
DDX41-204ENST00000504807 GLIS2Q9BZE0 524 aaPredicted RBP17.15■□□□□ 0.34
DDX41-204ENST00000504807 NOGQ13253 232 aa17.14■□□□□ 0.33
DDX41-204ENST00000504807 HABP4Q5JVS0 413 aaKnown RBP17.14■□□□□ 0.33
DDX41-204ENST00000504807 TCERG1O14776 1098 aaKnown RBP17.13■□□□□ 0.33
DDX41-204ENST00000504807 HCLS1P14317 486 aaPredicted RBP17.13■□□□□ 0.33
DDX41-204ENST00000504807 PARP10Q53GL7 1025 aa17.13■□□□□ 0.33
DDX41-204ENST00000504807 SLC10A5Q5PT55 438 aa17.13■□□□□ 0.33
DDX41-204ENST00000504807 C8orf58Q8NAV2 365 aa17.13■□□□□ 0.33
DDX41-204ENST00000504807 UTP14AQ9BVJ6 771 aaKnown RBP17.13■□□□□ 0.33
DDX41-204ENST00000504807 DDX60Q8IY21 1712 aaKnown RBP17.13■□□□□ 0.33
DDX41-204ENST00000504807 TRPM7Q96QT4 1865 aa17.12■□□□□ 0.33
DDX41-204ENST00000504807 ELL2O00472 640 aaPredicted RBP17.12■□□□□ 0.33
DDX41-204ENST00000504807 ALDH1B1P30837 517 aa17.12■□□□□ 0.33
DDX41-204ENST00000504807 TCIRG1Q13488 830 aa17.12■□□□□ 0.33
DDX41-204ENST00000504807 TAF1P21675 1872 aa17.12■□□□□ 0.33
DDX41-204ENST00000504807 HOXB7P09629 217 aa17.11■□□□□ 0.33
DDX41-204ENST00000504807 PPP1R42Q7Z4L9 355 aa17.11■□□□□ 0.33
DDX41-204ENST00000504807 TSPYL6Q8N831 410 aa17.11■□□□□ 0.33
DDX41-204ENST00000504807 RPGRQ92834 1020 aaKnown RBP17.11■□□□□ 0.33
DDX41-204ENST00000504807 CRAMP1Q96RY5 1269 aa17.11■□□□□ 0.33
DDX41-204ENST00000504807 PSMD1Q99460 953 aa17.11■□□□□ 0.33
DDX41-204ENST00000504807 PHAXQ9H814 394 aaKnown RBP17.11■□□□□ 0.33
DDX41-204ENST00000504807 IFT57Q9NWB7 429 aa17.11■□□□□ 0.33
DDX41-204ENST00000504807 ABCC4O15439 1325 aa17.11■□□□□ 0.33
DDX41-204ENST00000504807 ATP5J2-PTCD1G3V325 749 aa17.1■□□□□ 0.33
DDX41-204ENST00000504807 PPEF1O14829 653 aaPredicted RBP17.1■□□□□ 0.33
DDX41-204ENST00000504807 TRPA1O75762 1119 aa17.1■□□□□ 0.33
DDX41-204ENST00000504807 CTU1Q7Z7A3 348 aaKnown RBP17.1■□□□□ 0.33
DDX41-204ENST00000504807 LARGE2Q8N3Y3 721 aa17.1■□□□□ 0.33
DDX41-204ENST00000504807 ISCA1Q9BUE6 129 aa17.1■□□□□ 0.33
DDX41-204ENST00000504807 ADARB2Q9NS39 739 aaKnown RBP17.1■□□□□ 0.33
DDX41-204ENST00000504807 HUNKP57058 714 aa17.09■□□□□ 0.33
DDX41-204ENST00000504807 PLBD2Q8NHP8 589 aa17.09■□□□□ 0.33
DDX41-204ENST00000504807 TSR2Q969E8 191 aaKnown RBP17.09■□□□□ 0.33
DDX41-204ENST00000504807 SAGE1Q9NXZ1 904 aa17.09■□□□□ 0.33
DDX41-204ENST00000504807 DBF4Q9UBU7 674 aaPredicted RBP17.09■□□□□ 0.33
DDX41-204ENST00000504807 HPS5Q9UPZ3 1129 aa17.09■□□□□ 0.33
DDX41-204ENST00000504807 DUOX1Q9NRD9 1551 aa17.09■□□□□ 0.33
DDX41-204ENST00000504807 RBM17Q96I25 401 aaKnown RBP17.08■□□□□ 0.32
DDX41-204ENST00000504807 GPRC5DQ9NZD1 345 aa17.08■□□□□ 0.32
DDX41-204ENST00000504807 ANKRD13DQ6ZTN6 518 aa17.07■□□□□ 0.32
DDX41-204ENST00000504807 FAM89AQ96GI7 184 aa17.07■□□□□ 0.32
DDX41-204ENST00000504807 NLRP3Q96P20 1036 aa17.07■□□□□ 0.32
DDX41-204ENST00000504807 RNF186Q9NXI6 227 aa17.07■□□□□ 0.32
DDX41-204ENST00000504807 TRMT112Q9UI30 125 aaKnown RBP17.07■□□□□ 0.32
DDX41-204ENST00000504807 ZNF316A6NFI3 1004 aaPredicted RBP17.06■□□□□ 0.32
DDX41-204ENST00000504807 GNAI1P63096 354 aa17.06■□□□□ 0.32
DDX41-204ENST00000504807 KIF23Q02241 960 aaPredicted RBP17.06■□□□□ 0.32
DDX41-204ENST00000504807 HSP90AB3PQ58FF7 597 aa17.06■□□□□ 0.32
DDX41-204ENST00000504807 RTL5Q5HYW3 569 aaPredicted RBP17.06■□□□□ 0.32
DDX41-204ENST00000504807 ATP6V0A2Q9Y487 856 aa17.06■□□□□ 0.32
DDX41-204ENST00000504807 SH3TC1Q8TE82 1336 aa17.05■□□□□ 0.32
DDX41-204ENST00000504807 DLK2Q6UY11 383 aa17.05■□□□□ 0.32
DDX41-204ENST00000504807 NIM1KQ8IY84 436 aa17.05■□□□□ 0.32
DDX41-204ENST00000504807 LRRC37AA6NMS7 1700 aa17.04■□□□□ 0.32
DDX41-204ENST00000504807 FAM155AB1AL88 458 aaPredicted RBP17.04■□□□□ 0.32
DDX41-204ENST00000504807 AOC3Q16853 763 aa17.04■□□□□ 0.32
DDX41-204ENST00000504807 WWC1Q8IX03 1113 aa17.04■□□□□ 0.32
DDX41-204ENST00000504807 JARID2Q92833 1246 aaPredicted RBP17.04■□□□□ 0.32
DDX41-204ENST00000504807 HYPKQ9NX55 129 aa17.04■□□□□ 0.32
DDX41-204ENST00000504807 GMPSP49915 693 aaPredicted RBP17.03■□□□□ 0.32
DDX41-204ENST00000504807 RGMBQ6NW40 437 aa17.03■□□□□ 0.32
DDX41-204ENST00000504807 CDC37L1Q7L3B6 337 aa17.03■□□□□ 0.32
DDX41-204ENST00000504807 CELF1Q92879 486 aaKnown RBP17.03■□□□□ 0.32
DDX41-204ENST00000504807 ZEB1P37275 1124 aaPredicted RBP17.02■□□□□ 0.32
DDX41-204ENST00000504807 FXR1P51114 621 aaKnown RBP eCLIP17.02■□□□□ 0.32
DDX41-204ENST00000504807 HIRAP54198 1017 aaPredicted RBP17.02■□□□□ 0.32
DDX41-204ENST00000504807 CC2D2BQ6DHV5 1058 aa17.02■□□□□ 0.32
DDX41-204ENST00000504807 USP48Q86UV5 1035 aa17.02■□□□□ 0.32
DDX41-204ENST00000504807 RTFDC1Q9BY42 306 aaPredicted RBP17.02■□□□□ 0.32
DDX41-204ENST00000504807 MRS2Q9HD23 443 aa17.02■□□□□ 0.32
DDX41-204ENST00000504807 PGAP2Q9UHJ9 254 aa17.02■□□□□ 0.32
DDX41-204ENST00000504807 PPIP5K2O43314 1243 aa17.01■□□□□ 0.31
DDX41-204ENST00000504807 GRAPQ13588 217 aa17.01■□□□□ 0.31
DDX41-204ENST00000504807 G2E3Q7L622 706 aa17.01■□□□□ 0.31
DDX41-204ENST00000504807 GRAPLQ8TC17 118 aaPredicted RBP17.01■□□□□ 0.31
DDX41-204ENST00000504807 TRPM4Q8TD43 1214 aa17.01■□□□□ 0.31
DDX41-204ENST00000504807 MYD88Q99836 296 aa17.01■□□□□ 0.31
DDX41-204ENST00000504807 ZNF157P51786 506 aaPredicted RBP17■□□□□ 0.31
DDX41-204ENST00000504807 TRIM28Q13263 835 aaKnown RBP17■□□□□ 0.31
DDX41-204ENST00000504807 CCDC27Q2M243 656 aa17■□□□□ 0.31
DDX41-204ENST00000504807 SP8Q8IXZ3 490 aa17■□□□□ 0.31
DDX41-204ENST00000504807 ZC3H15Q8WU90 426 aaKnown RBP17■□□□□ 0.31
DDX41-204ENST00000504807 CCDC102AQ96A19 550 aa17■□□□□ 0.31
DDX41-204ENST00000504807 SPINK5Q9NQ38 1064 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms