RNA–Protein interactions for RNA: ENST00000504666.5

SIL1-205, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 2

Gene SIL1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-205ENST00000504666 JARID2Q92833 1246 aaPredicted RBP17.38■□□□□ 0.37
SIL1-205ENST00000504666 SUCLG2Q96I99 432 aa17.38■□□□□ 0.37
SIL1-205ENST00000504666 MTX1Q13505 466 aa17.37■□□□□ 0.37
SIL1-205ENST00000504666 RABL6Q3YEC7 729 aaPredicted RBP17.37■□□□□ 0.37
SIL1-205ENST00000504666 C9orf131Q5VYM1 1079 aa17.37■□□□□ 0.37
SIL1-205ENST00000504666 PRR5LQ6MZQ0 368 aa17.37■□□□□ 0.37
SIL1-205ENST00000504666 NUTM1Q86Y26 1132 aa17.37■□□□□ 0.37
SIL1-205ENST00000504666 HSPA6P17066 643 aa17.36■□□□□ 0.37
SIL1-205ENST00000504666 SYNE4Q8N205 404 aa17.36■□□□□ 0.37
SIL1-205ENST00000504666 KAZALD1Q96I82 304 aa17.36■□□□□ 0.37
SIL1-205ENST00000504666 RNF181Q9P0P0 153 aa17.36■□□□□ 0.37
SIL1-205ENST00000504666 ANKRD36CQ5JPF3 1778 aa17.35■□□□□ 0.37
SIL1-205ENST00000504666 HMMRO75330 724 aa17.35■□□□□ 0.37
SIL1-205ENST00000504666 HCLS1P14317 486 aaPredicted RBP17.35■□□□□ 0.37
SIL1-205ENST00000504666 KCNA3P22001 575 aa17.35■□□□□ 0.37
SIL1-205ENST00000504666 CTSWP56202 376 aa17.35■□□□□ 0.37
SIL1-205ENST00000504666 FOXO4P98177 505 aa17.35■□□□□ 0.37
SIL1-205ENST00000504666 ATP8B2P98198 1209 aa17.35■□□□□ 0.37
SIL1-205ENST00000504666 CEP85Q6P2H3 762 aa17.35■□□□□ 0.37
SIL1-205ENST00000504666 C16orf71Q8IYS4 520 aaPredicted RBP17.35■□□□□ 0.37
SIL1-205ENST00000504666 ANKRD44Q8N8A2 993 aa17.35■□□□□ 0.37
SIL1-205ENST00000504666 NLRP3Q96P20 1036 aa17.35■□□□□ 0.37
SIL1-205ENST00000504666 BICC1Q9H694 974 aaKnown RBP17.35■□□□□ 0.37
SIL1-205ENST00000504666 C1orf115Q9H7X2 142 aa17.35■□□□□ 0.37
SIL1-205ENST00000504666 RIC1Q4ADV7 1423 aa17.35■□□□□ 0.37
SIL1-205ENST00000504666 KIF3CO14782 793 aa17.34■□□□□ 0.37
SIL1-205ENST00000504666 CSF1RP07333 972 aa17.34■□□□□ 0.37
SIL1-205ENST00000504666 EPHA10Q5JZY3 1008 aa17.34■□□□□ 0.37
SIL1-205ENST00000504666 LMBR1LQ6UX01 489 aa17.34■□□□□ 0.37
SIL1-205ENST00000504666 BRIP1Q9BX63 1249 aa17.34■□□□□ 0.37
SIL1-205ENST00000504666 PCDHB15Q9Y5E8 787 aa17.34■□□□□ 0.37
SIL1-205ENST00000504666 SF3B3Q15393 1217 aaKnown RBP17.33■□□□□ 0.36
SIL1-205ENST00000504666 CCDC152Q4G0S7 254 aa17.33■□□□□ 0.36
SIL1-205ENST00000504666 TTLL11Q8NHH1 800 aa17.33■□□□□ 0.36
SIL1-205ENST00000504666 NMRK2Q9NPI5 230 aa17.33■□□□□ 0.36
SIL1-205ENST00000504666 PPP4R2Q9NY27 417 aa17.33■□□□□ 0.36
SIL1-205ENST00000504666 PDZRN3Q9UPQ7 1066 aa17.33■□□□□ 0.36
SIL1-205ENST00000504666 PDE6BP35913 854 aa17.32■□□□□ 0.36
SIL1-205ENST00000504666 RASSF7Q02833 373 aa17.32■□□□□ 0.36
SIL1-205ENST00000504666 C2CD5Q86YS7 1000 aa17.32■□□□□ 0.36
SIL1-205ENST00000504666 RWDD1Q9H446 243 aaPredicted RBP17.32■□□□□ 0.36
SIL1-205ENST00000504666 DLEC1Q9Y238 1755 aa17.32■□□□□ 0.36
SIL1-205ENST00000504666 NRXN2Q9P2S2 1712 aa17.32■□□□□ 0.36
SIL1-205ENST00000504666 CEP350Q5VT06 3117 aa17.32■□□□□ 0.36
SIL1-205ENST00000504666 RTL9Q8NET4 1388 aa17.31■□□□□ 0.36
SIL1-205ENST00000504666 ABCC12Q96J65 1359 aa17.31■□□□□ 0.36
SIL1-205ENST00000504666 KLRG2A4D1S0 409 aaPredicted RBP17.31■□□□□ 0.36
SIL1-205ENST00000504666 SRGAP3O43295 1099 aa17.31■□□□□ 0.36
SIL1-205ENST00000504666 HDAC1Q13547 482 aaPredicted RBP17.31■□□□□ 0.36
SIL1-205ENST00000504666 SSH3Q8TE77 659 aa17.31■□□□□ 0.36
SIL1-205ENST00000504666 KDM2BQ8NHM5 1336 aa17.3■□□□□ 0.36
SIL1-205ENST00000504666 POLA2Q14181 598 aa17.3■□□□□ 0.36
SIL1-205ENST00000504666 CCDC57Q2TAC2 916 aa17.3■□□□□ 0.36
SIL1-205ENST00000504666 SIRT2Q8IXJ6 389 aa17.3■□□□□ 0.36
SIL1-205ENST00000504666 CHMP3Q9Y3E7 222 aa17.3■□□□□ 0.36
SIL1-205ENST00000504666 PNMA6EA0A0J9YXQ4 647 aa17.29■□□□□ 0.36
SIL1-205ENST00000504666 H0YIN7 160 aa17.29■□□□□ 0.36
SIL1-205ENST00000504666 IFIT5Q13325 482 aaKnown RBP17.29■□□□□ 0.36
SIL1-205ENST00000504666 CRY2Q49AN0 593 aa17.29■□□□□ 0.36
SIL1-205ENST00000504666 CCDC24Q8N4L8 307 aa17.29■□□□□ 0.36
SIL1-205ENST00000504666 ZNF622Q969S3 477 aaKnown RBP eCLIP17.29■□□□□ 0.36
SIL1-205ENST00000504666 CCDC136Q96JN2 1154 aa17.29■□□□□ 0.36
SIL1-205ENST00000504666 ZNF219Q9P2Y4 722 aaPredicted RBP17.29■□□□□ 0.36
SIL1-205ENST00000504666 GTF3C3Q9Y5Q9 886 aa17.29■□□□□ 0.36
SIL1-205ENST00000504666 TIAM2Q8IVF5 1701 aa17.28■□□□□ 0.36
SIL1-205ENST00000504666 ANKRD18BA2A2Z9 1011 aa17.28■□□□□ 0.36
SIL1-205ENST00000504666 TOMM70O94826 608 aa17.28■□□□□ 0.36
SIL1-205ENST00000504666 GREM2Q9H772 168 aa17.28■□□□□ 0.36
SIL1-205ENST00000504666 TNRC6CQ9HCJ0 1690 aaKnown RBP17.28■□□□□ 0.36
SIL1-205ENST00000504666 CACNA1SQ13698 1873 aa17.28■□□□□ 0.36
SIL1-205ENST00000504666 ITGA6P23229 1130 aa17.27■□□□□ 0.36
SIL1-205ENST00000504666 FAM161AQ3B820 660 aa17.27■□□□□ 0.36
SIL1-205ENST00000504666 HSP90AB4PQ58FF6 505 aa17.27■□□□□ 0.36
SIL1-205ENST00000504666 C3orf67Q6ZVT6 689 aa17.27■□□□□ 0.36
SIL1-205ENST00000504666 DDX46Q7L014 1031 aaKnown RBP17.27■□□□□ 0.36
SIL1-205ENST00000504666 TTLL6Q8N841 843 aa17.27■□□□□ 0.36
SIL1-205ENST00000504666 RPGRQ92834 1020 aaKnown RBP17.27■□□□□ 0.36
SIL1-205ENST00000504666 CDC5LQ99459 802 aaKnown RBP17.27■□□□□ 0.36
SIL1-205ENST00000504666 FBXO3Q9UK99 471 aa17.27■□□□□ 0.36
SIL1-205ENST00000504666 COL11A2P13942 1736 aaPredicted RBP17.27■□□□□ 0.35
SIL1-205ENST00000504666 SBF1O95248 1867 aa17.27■□□□□ 0.35
SIL1-205ENST00000504666 HOXA10P31260 410 aaPredicted RBP17.26■□□□□ 0.35
SIL1-205ENST00000504666 TAF7LQ5H9L4 462 aa17.26■□□□□ 0.35
SIL1-205ENST00000504666 RBM17Q96I25 401 aaKnown RBP17.26■□□□□ 0.35
SIL1-205ENST00000504666 COPRSQ9NQ92 184 aa17.26■□□□□ 0.35
SIL1-205ENST00000504666 NOP58Q9Y2X3 529 aaKnown RBP17.26■□□□□ 0.35
SIL1-205ENST00000504666 ANKRD31Q8N7Z5 1873 aa17.25■□□□□ 0.35
SIL1-205ENST00000504666 SRGNP10124 158 aa17.25■□□□□ 0.35
SIL1-205ENST00000504666 NPR1P16066 1061 aa17.25■□□□□ 0.35
SIL1-205ENST00000504666 RFX5P48382 616 aaPredicted RBP17.25■□□□□ 0.35
SIL1-205ENST00000504666 APLP1P51693 650 aa17.25■□□□□ 0.35
SIL1-205ENST00000504666 GCC1Q96CN9 775 aa17.25■□□□□ 0.35
SIL1-205ENST00000504666 CCDC85AQ96PX6 553 aaPredicted RBP17.25■□□□□ 0.35
SIL1-205ENST00000504666 CRAMP1Q96RY5 1269 aa17.25■□□□□ 0.35
SIL1-205ENST00000504666 RRAGCQ9HB90 399 aa17.25■□□□□ 0.35
SIL1-205ENST00000504666 PTPN12Q05209 780 aaKnown RBP17.24■□□□□ 0.35
SIL1-205ENST00000504666 MASTLQ96GX5 879 aa17.24■□□□□ 0.35
SIL1-205ENST00000504666 DCTPP1Q9H773 170 aa17.24■□□□□ 0.35
SIL1-205ENST00000504666 CCDC88AQ3V6T2 1871 aa17.23■□□□□ 0.35
SIL1-205ENST00000504666 SURF6O75683 361 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms