RNA–Protein interactions for RNA: ENST00000504543.1

USP17L28-201, Transcript of ubiquitin specific peptidase 17-like family member 28, humanhuman

APPRIS P1 BASIC

Gene USP17L28, Length 1,593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L28-201ENST00000504543 ALDH1B1P30837 517 aa12.72□□□□□ -0.37
USP17L28-201ENST00000504543 RGS3P49796 1198 aa12.72□□□□□ -0.37
USP17L28-201ENST00000504543 SF3B3Q15393 1217 aaKnown RBP12.72□□□□□ -0.37
USP17L28-201ENST00000504543 FAM161AQ3B820 660 aa12.72□□□□□ -0.37
USP17L28-201ENST00000504543 DALRD3Q5D0E6 543 aaKnown RBP12.72□□□□□ -0.37
USP17L28-201ENST00000504543 SKAP1Q86WV1 359 aa12.72□□□□□ -0.37
USP17L28-201ENST00000504543 GCC1Q96CN9 775 aa12.72□□□□□ -0.37
USP17L28-201ENST00000504543 CRAMP1Q96RY5 1269 aa12.72□□□□□ -0.37
USP17L28-201ENST00000504543 PLA2G12BQ9BX93 195 aa12.72□□□□□ -0.37
USP17L28-201ENST00000504543 SRCAPQ6ZRS2 3230 aa12.72□□□□□ -0.37
USP17L28-201ENST00000504543 COL11A2P13942 1736 aaPredicted RBP12.71□□□□□ -0.37
USP17L28-201ENST00000504543 GCKRQ14397 625 aa12.71□□□□□ -0.37
USP17L28-201ENST00000504543 NUTM1Q86Y26 1132 aa12.71□□□□□ -0.37
USP17L28-201ENST00000504543 DDX60Q8IY21 1712 aaKnown RBP12.71□□□□□ -0.37
USP17L28-201ENST00000504543 CHRNA5P30532 468 aa12.7□□□□□ -0.38
USP17L28-201ENST00000504543 GRIPAP1Q4V328 841 aa12.7□□□□□ -0.38
USP17L28-201ENST00000504543 SOGA3Q5TF21 947 aa12.7□□□□□ -0.38
USP17L28-201ENST00000504543 TNRC6CQ9HCJ0 1690 aaKnown RBP12.7□□□□□ -0.38
USP17L28-201ENST00000504543 FAM177BA6PVY3 158 aa12.69□□□□□ -0.38
USP17L28-201ENST00000504543 IRS4O14654 1257 aaPredicted RBP12.69□□□□□ -0.38
USP17L28-201ENST00000504543 PDE8AO60658 829 aa12.69□□□□□ -0.38
USP17L28-201ENST00000504543 GPR162Q16538 588 aa12.69□□□□□ -0.38
USP17L28-201ENST00000504543 C8orf34Q49A92 452 aa12.69□□□□□ -0.38
USP17L28-201ENST00000504543 CC2D2BQ6DHV5 1058 aa12.69□□□□□ -0.38
USP17L28-201ENST00000504543 TMC4Q7Z404 712 aa12.69□□□□□ -0.38
USP17L28-201ENST00000504543 SRCIN1Q9C0H9 1055 aa12.69□□□□□ -0.38
USP17L28-201ENST00000504543 UTYO14607 1347 aa12.69□□□□□ -0.38
USP17L28-201ENST00000504543 RTL9Q8NET4 1388 aa12.69□□□□□ -0.38
USP17L28-201ENST00000504543 YBX3P16989 372 aaKnown RBP eCLIP12.69□□□□□ -0.38
USP17L28-201ENST00000504543 CASP7P55210 303 aa12.69□□□□□ -0.38
USP17L28-201ENST00000504543 NUCB1Q02818 461 aa12.69□□□□□ -0.38
USP17L28-201ENST00000504543 CWF19L2Q2TBE0 894 aaKnown RBP12.69□□□□□ -0.38
USP17L28-201ENST00000504543 RPAP2Q8IXW5 612 aaPredicted RBP12.69□□□□□ -0.38
USP17L28-201ENST00000504543 ANKRD44Q8N8A2 993 aa12.69□□□□□ -0.38
USP17L28-201ENST00000504543 FAM89AQ96GI7 184 aa12.69□□□□□ -0.38
USP17L28-201ENST00000504543 RBM17Q96I25 401 aaKnown RBP12.69□□□□□ -0.38
USP17L28-201ENST00000504543 MYH3P11055 1940 aa12.68□□□□□ -0.38
USP17L28-201ENST00000504543 CHD4Q14839 1912 aa12.68□□□□□ -0.38
USP17L28-201ENST00000504543 F6X3S4 739 aa12.68□□□□□ -0.38
USP17L28-201ENST00000504543 BBOX1O75936 387 aa12.68□□□□□ -0.38
USP17L28-201ENST00000504543 CCDC24Q8N4L8 307 aa12.68□□□□□ -0.38
USP17L28-201ENST00000504543 C7orf43Q8WVR3 580 aa12.68□□□□□ -0.38
USP17L28-201ENST00000504543 RPGRQ92834 1020 aaKnown RBP12.68□□□□□ -0.38
USP17L28-201ENST00000504543 GNAI3P08754 354 aa12.67□□□□□ -0.38
USP17L28-201ENST00000504543 SIRT2Q8IXJ6 389 aa12.67□□□□□ -0.38
USP17L28-201ENST00000504543 MEIS3Q99687 375 aa12.67□□□□□ -0.38
USP17L28-201ENST00000504543 C1orf115Q9H7X2 142 aa12.67□□□□□ -0.38
USP17L28-201ENST00000504543 HDAC5Q9UQL6 1122 aa12.67□□□□□ -0.38
USP17L28-201ENST00000504543 BCS1LQ9Y276 419 aa12.67□□□□□ -0.38
USP17L28-201ENST00000504543 LTBP3Q9NS15 1303 aa12.67□□□□□ -0.38
USP17L28-201ENST00000504543 SLX4Q8IY92 1834 aa12.66□□□□□ -0.38
USP17L28-201ENST00000504543 GRM8O00222 908 aa12.66□□□□□ -0.38
USP17L28-201ENST00000504543 HCLS1P14317 486 aaPredicted RBP12.66□□□□□ -0.38
USP17L28-201ENST00000504543 ANP32AP39687 249 aaKnown RBP12.66□□□□□ -0.38
USP17L28-201ENST00000504543 PRPF40BQ6NWY9 871 aaKnown RBP12.66□□□□□ -0.38
USP17L28-201ENST00000504543 CEP85Q6P2H3 762 aa12.66□□□□□ -0.38
USP17L28-201ENST00000504543 SYNE4Q8N205 404 aa12.66□□□□□ -0.38
USP17L28-201ENST00000504543 ZNF622Q969S3 477 aaKnown RBP eCLIP12.66□□□□□ -0.38
USP17L28-201ENST00000504543 CSF1RP07333 972 aa12.65□□□□□ -0.38
USP17L28-201ENST00000504543 CCDC152Q4G0S7 254 aa12.65□□□□□ -0.38
USP17L28-201ENST00000504543 DDX46Q7L014 1031 aaKnown RBP12.65□□□□□ -0.38
USP17L28-201ENST00000504543 CHD1LQ86WJ1 897 aa12.65□□□□□ -0.38
USP17L28-201ENST00000504543 HMMRO75330 724 aa12.64□□□□□ -0.39
USP17L28-201ENST00000504543 GRAPQ13588 217 aa12.64□□□□□ -0.39
USP17L28-201ENST00000504543 SLC4A10Q6U841 1118 aa12.64□□□□□ -0.39
USP17L28-201ENST00000504543 C3orf67Q6ZVT6 689 aa12.64□□□□□ -0.39
USP17L28-201ENST00000504543 UBE3BQ7Z3V4 1068 aa12.64□□□□□ -0.39
USP17L28-201ENST00000504543 TTLL11Q8NHH1 800 aa12.64□□□□□ -0.39
USP17L28-201ENST00000504543 GRAPLQ8TC17 118 aaPredicted RBP12.64□□□□□ -0.39
USP17L28-201ENST00000504543 DCTPP1Q9H773 170 aa12.64□□□□□ -0.39
USP17L28-201ENST00000504543 FER1L6Q2WGJ9 1857 aa12.64□□□□□ -0.39
USP17L28-201ENST00000504543 GNAI2P04899 355 aa12.64□□□□□ -0.39
USP17L28-201ENST00000504543 CTSWP56202 376 aa12.64□□□□□ -0.39
USP17L28-201ENST00000504543 RTKN2Q8IZC4 609 aa12.64□□□□□ -0.39
USP17L28-201ENST00000504543 C9orf78Q9NZ63 289 aaPredicted RBP12.64□□□□□ -0.39
USP17L28-201ENST00000504543 SNED1Q8TER0 1413 aa12.63□□□□□ -0.39
USP17L28-201ENST00000504543 CCDC93Q567U6 631 aa12.63□□□□□ -0.39
USP17L28-201ENST00000504543 SP8Q8IXZ3 490 aa12.63□□□□□ -0.39
USP17L28-201ENST00000504543 USP44Q9H0E7 712 aa12.63□□□□□ -0.39
USP17L28-201ENST00000504543 VPS33BQ9H267 617 aa12.63□□□□□ -0.39
USP17L28-201ENST00000504543 ATP6V0A2Q9Y487 856 aa12.63□□□□□ -0.39
USP17L28-201ENST00000504543 RABL6Q3YEC7 729 aaPredicted RBP12.62□□□□□ -0.39
USP17L28-201ENST00000504543 ZC3H4Q9UPT8 1303 aaKnown RBP12.62□□□□□ -0.39
USP17L28-201ENST00000504543 LRRC37AA6NMS7 1700 aa12.62□□□□□ -0.39
USP17L28-201ENST00000504543 RPS8P62241 208 aaKnown RBP12.61□□□□□ -0.39
USP17L28-201ENST00000504543 FOXO4P98177 505 aa12.61□□□□□ -0.39
USP17L28-201ENST00000504543 CDC5LQ99459 802 aaKnown RBP12.61□□□□□ -0.39
USP17L28-201ENST00000504543 PSMD1Q99460 953 aa12.61□□□□□ -0.39
USP17L28-201ENST00000504543 TMX4Q9H1E5 349 aaPredicted RBP12.61□□□□□ -0.39
USP17L28-201ENST00000504543 SBF1O95248 1867 aa12.61□□□□□ -0.39
USP17L28-201ENST00000504543 CACNA1SQ13698 1873 aa12.61□□□□□ -0.39
USP17L28-201ENST00000504543 AK9Q5TCS8 1911 aa12.61□□□□□ -0.39
USP17L28-201ENST00000504543 PPEF1O14829 653 aaPredicted RBP12.6□□□□□ -0.39
USP17L28-201ENST00000504543 C21orf2O43822 256 aa12.6□□□□□ -0.39
USP17L28-201ENST00000504543 RTL5Q5HYW3 569 aaPredicted RBP12.6□□□□□ -0.39
USP17L28-201ENST00000504543 ARHGAP27Q6ZUM4 889 aa12.6□□□□□ -0.39
USP17L28-201ENST00000504543 RTFDC1Q9BY42 306 aaPredicted RBP12.6□□□□□ -0.39
USP17L28-201ENST00000504543 LNPKQ9C0E8 428 aa12.6□□□□□ -0.39
USP17L28-201ENST00000504543 NBPF7P0C2Y1 421 aaPredicted RBP12.6□□□□□ -0.39
USP17L28-201ENST00000504543 UBTFL1P0CB47 393 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms