RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 CCDC87Q9NVE4 849 aa8.34□□□□□ -1.07
TRAPPC13-205ENST00000504243 ARHGEF15O94989 841 aa8.33□□□□□ -1.08
TRAPPC13-205ENST00000504243 PCBP4P57723 403 aaKnown RBP8.33□□□□□ -1.08
TRAPPC13-205ENST00000504243 GRIN2CQ14957 1233 aa8.33□□□□□ -1.08
TRAPPC13-205ENST00000504243 DNAJC14Q6Y2X3 702 aaPredicted RBP8.33□□□□□ -1.08
TRAPPC13-205ENST00000504243 RGL4Q8IZJ4 473 aa8.33□□□□□ -1.08
TRAPPC13-205ENST00000504243 CMTR1Q8N1G2 835 aaKnown RBP8.33□□□□□ -1.08
TRAPPC13-205ENST00000504243 EDARADDQ8WWZ3 215 aa8.33□□□□□ -1.08
TRAPPC13-205ENST00000504243 BHMTQ93088 406 aa8.33□□□□□ -1.08
TRAPPC13-205ENST00000504243 EGFRP00533 1210 aa8.32□□□□□ -1.08
TRAPPC13-205ENST00000504243 PCSK2P16519 638 aa8.32□□□□□ -1.08
TRAPPC13-205ENST00000504243 GRNP28799 593 aaKnown RBP8.32□□□□□ -1.08
TRAPPC13-205ENST00000504243 FAM26DQ5JW98 314 aa8.32□□□□□ -1.08
TRAPPC13-205ENST00000504243 NEDD1Q8NHV4 660 aa8.32□□□□□ -1.08
TRAPPC13-205ENST00000504243 ASB16Q96NS5 453 aa8.32□□□□□ -1.08
TRAPPC13-205ENST00000504243 BCL2L13Q9BXK5 485 aa8.32□□□□□ -1.08
TRAPPC13-205ENST00000504243 KLF15Q9UIH9 416 aa8.32□□□□□ -1.08
TRAPPC13-205ENST00000504243 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.32□□□□□ -1.08
TRAPPC13-205ENST00000504243 XYLBO75191 536 aa8.31□□□□□ -1.08
TRAPPC13-205ENST00000504243 RPLP1P05386 114 aaKnown RBP8.31□□□□□ -1.08
TRAPPC13-205ENST00000504243 EPXP11678 715 aa8.31□□□□□ -1.08
TRAPPC13-205ENST00000504243 ALAS2P22557 587 aa8.31□□□□□ -1.08
TRAPPC13-205ENST00000504243 RAB44Q7Z6P3 723 aaPredicted RBP8.31□□□□□ -1.08
TRAPPC13-205ENST00000504243 FCHSD1Q86WN1 690 aa8.31□□□□□ -1.08
TRAPPC13-205ENST00000504243 GPR152Q8TDT2 470 aa8.31□□□□□ -1.08
TRAPPC13-205ENST00000504243 EDEM1Q92611 657 aa8.31□□□□□ -1.08
TRAPPC13-205ENST00000504243 TNFRSF25Q93038 417 aa8.31□□□□□ -1.08
TRAPPC13-205ENST00000504243 POLIQ9UNA4 740 aa8.31□□□□□ -1.08
TRAPPC13-205ENST00000504243 FNDC3AQ9Y2H6 1198 aaKnown RBP8.31□□□□□ -1.08
TRAPPC13-205ENST00000504243 AMOTL2Q9Y2J4 779 aa8.31□□□□□ -1.08
TRAPPC13-205ENST00000504243 ADARB2-AS1A8MUL3 147 aa8.3□□□□□ -1.08
TRAPPC13-205ENST00000504243 FZD6O60353 706 aa8.3□□□□□ -1.08
TRAPPC13-205ENST00000504243 C1orf229Q6ZS94 237 aaPredicted RBP8.3□□□□□ -1.08
TRAPPC13-205ENST00000504243 ADAMTS8Q9UP79 889 aa8.3□□□□□ -1.08
TRAPPC13-205ENST00000504243 USP20Q9Y2K6 914 aa8.3□□□□□ -1.08
TRAPPC13-205ENST00000504243 KCNMB2Q9Y691 235 aa8.3□□□□□ -1.08
TRAPPC13-205ENST00000504243 ELOA3CA0A087WX78 387 aaPredicted RBP8.29□□□□□ -1.08
TRAPPC13-205ENST00000504243 ELOA3DA6NLF2 546 aaPredicted RBP8.29□□□□□ -1.08
TRAPPC13-205ENST00000504243 NFKB1P19838 968 aa8.29□□□□□ -1.08
TRAPPC13-205ENST00000504243 PCSK7Q16549 785 aa8.29□□□□□ -1.08
TRAPPC13-205ENST00000504243 ELOA3BQ3SY89 546 aa8.29□□□□□ -1.08
TRAPPC13-205ENST00000504243 C8orf34Q49A92 452 aa8.29□□□□□ -1.08
TRAPPC13-205ENST00000504243 TMC7Q7Z402 723 aa8.29□□□□□ -1.08
TRAPPC13-205ENST00000504243 ELOA3Q8NG57 546 aa8.29□□□□□ -1.08
TRAPPC13-205ENST00000504243 GIPC2Q8TF65 315 aa8.29□□□□□ -1.08
TRAPPC13-205ENST00000504243 SASH3O75995 380 aa8.28□□□□□ -1.08
TRAPPC13-205ENST00000504243 MAP3K6O95382 1288 aa8.28□□□□□ -1.08
TRAPPC13-205ENST00000504243 RARAP10276 462 aa8.28□□□□□ -1.08
TRAPPC13-205ENST00000504243 MZF1P28698 734 aaPredicted RBP8.28□□□□□ -1.08
TRAPPC13-205ENST00000504243 PDE3BQ13370 1112 aa8.28□□□□□ -1.08
TRAPPC13-205ENST00000504243 CITED4Q96RK1 184 aa8.28□□□□□ -1.08
TRAPPC13-205ENST00000504243 RBCK1Q9BYM8 510 aa8.28□□□□□ -1.08
TRAPPC13-205ENST00000504243 UBE2OQ9C0C9 1292 aaKnown RBP8.28□□□□□ -1.08
TRAPPC13-205ENST00000504243 SHISA8B8ZZ34 492 aa8.27□□□□□ -1.09
TRAPPC13-205ENST00000504243 UBAP1LF5GYI3 381 aa8.27□□□□□ -1.09
TRAPPC13-205ENST00000504243 AMPD1P23109 780 aa8.27□□□□□ -1.09
TRAPPC13-205ENST00000504243 TARSP26639 723 aaKnown RBP8.27□□□□□ -1.09
TRAPPC13-205ENST00000504243 USP5P45974 858 aa8.27□□□□□ -1.09
TRAPPC13-205ENST00000504243 ZNF326Q5BKZ1 582 aaKnown RBP8.27□□□□□ -1.09
TRAPPC13-205ENST00000504243 KRT25Q7Z3Z0 450 aa8.27□□□□□ -1.09
TRAPPC13-205ENST00000504243 NPAS4Q8IUM7 802 aa8.27□□□□□ -1.09
TRAPPC13-205ENST00000504243 NUDT16Q96DE0 195 aaKnown RBP8.27□□□□□ -1.09
TRAPPC13-205ENST00000504243 BTBD6Q96KE9 485 aa8.27□□□□□ -1.09
TRAPPC13-205ENST00000504243 E9PSI1 815 aa8.26□□□□□ -1.09
TRAPPC13-205ENST00000504243 PDGFAP04085 211 aa8.26□□□□□ -1.09
TRAPPC13-205ENST00000504243 MAPK8P45983 427 aa8.26□□□□□ -1.09
TRAPPC13-205ENST00000504243 PLCB3Q01970 1234 aa8.26□□□□□ -1.09
TRAPPC13-205ENST00000504243 EAPPQ56P03 285 aaPredicted RBP8.26□□□□□ -1.09
TRAPPC13-205ENST00000504243 CHSY3Q70JA7 882 aa8.26□□□□□ -1.09
TRAPPC13-205ENST00000504243 NLRP13Q86W25 1043 aa8.26□□□□□ -1.09
TRAPPC13-205ENST00000504243 SCARF2Q96GP6 870 aaPredicted RBP8.26□□□□□ -1.09
TRAPPC13-205ENST00000504243 DMRTB1Q96MA1 342 aa8.26□□□□□ -1.09
TRAPPC13-205ENST00000504243 MDFIQ99750 246 aa8.26□□□□□ -1.09
TRAPPC13-205ENST00000504243 ADH7P40394 386 aa8.25□□□□□ -1.09
TRAPPC13-205ENST00000504243 PDE12Q6L8Q7 609 aaKnown RBP8.25□□□□□ -1.09
TRAPPC13-205ENST00000504243 KANK3Q6NY19 840 aa8.25□□□□□ -1.09
TRAPPC13-205ENST00000504243 NIF3L1Q9GZT8 377 aa8.25□□□□□ -1.09
TRAPPC13-205ENST00000504243 BCL11AQ9H165 835 aa8.25□□□□□ -1.09
TRAPPC13-205ENST00000504243 IGFLR1Q9H665 355 aa8.25□□□□□ -1.09
TRAPPC13-205ENST00000504243 RRAGCQ9HB90 399 aa8.25□□□□□ -1.09
TRAPPC13-205ENST00000504243 ZFATQ9P243 1243 aa8.25□□□□□ -1.09
TRAPPC13-205ENST00000504243 RBM47A0AV96 593 aaKnown RBP8.24□□□□□ -1.09
TRAPPC13-205ENST00000504243 PIK3R2O00459 728 aa8.24□□□□□ -1.09
TRAPPC13-205ENST00000504243 TBC1D8BQ0IIM8 1120 aa8.24□□□□□ -1.09
TRAPPC13-205ENST00000504243 TRIP4Q15650 581 aaPredicted RBP8.24□□□□□ -1.09
TRAPPC13-205ENST00000504243 DHX32Q7L7V1 743 aaKnown RBP8.24□□□□□ -1.09
TRAPPC13-205ENST00000504243 PODNQ7Z5L7 613 aa8.24□□□□□ -1.09
TRAPPC13-205ENST00000504243 BEND7Q8N7W2 519 aaPredicted RBP8.24□□□□□ -1.09
TRAPPC13-205ENST00000504243 DNAJB12Q9NXW2 375 aaKnown RBP8.24□□□□□ -1.09
TRAPPC13-205ENST00000504243 TLR7Q9NYK1 1049 aaKnown RBP8.24□□□□□ -1.09
TRAPPC13-205ENST00000504243 RNF225M0QZC1 329 aaPredicted RBP8.23□□□□□ -1.09
TRAPPC13-205ENST00000504243 PSAPP07602 524 aa8.23□□□□□ -1.09
TRAPPC13-205ENST00000504243 XKR5Q6UX68 686 aa8.23□□□□□ -1.09
TRAPPC13-205ENST00000504243 A6NHS1 94 aa8.22□□□□□ -1.09
TRAPPC13-205ENST00000504243 PHF20L1A8MW92 1017 aa8.22□□□□□ -1.09
TRAPPC13-205ENST00000504243 TREHO43280 583 aa8.22□□□□□ -1.09
TRAPPC13-205ENST00000504243 P4HBP07237 508 aaKnown RBP8.22□□□□□ -1.09
TRAPPC13-205ENST00000504243 ZNF16P17020 682 aaPredicted RBP8.22□□□□□ -1.09
TRAPPC13-205ENST00000504243 SOX18P35713 384 aa8.22□□□□□ -1.09
TRAPPC13-205ENST00000504243 NRLP54845 237 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms