RNA–Protein interactions for RNA: ENST00000504010.5

NR1I3-219, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 944 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-219ENST00000504010 SETDB2Q96T68 719 aa11.6□□□□□ -0.55
NR1I3-219ENST00000504010 ZBTB3Q9H5J0 574 aa11.6□□□□□ -0.55
NR1I3-219ENST00000504010 ZNF541Q9H0D2 1346 aa11.6□□□□□ -0.55
NR1I3-219ENST00000504010 BCAR3O75815 825 aa11.59□□□□□ -0.55
NR1I3-219ENST00000504010 BRPF1P55201 1214 aaPredicted RBP11.59□□□□□ -0.55
NR1I3-219ENST00000504010 CYP4F22Q6NT55 531 aa11.59□□□□□ -0.55
NR1I3-219ENST00000504010 LRP10Q7Z4F1 713 aa11.59□□□□□ -0.55
NR1I3-219ENST00000504010 DZIP3Q86Y13 1208 aaKnown RBP11.59□□□□□ -0.55
NR1I3-219ENST00000504010 TLL2Q9Y6L7 1015 aa11.59□□□□□ -0.55
NR1I3-219ENST00000504010 RNF123Q5XPI4 1314 aa11.59□□□□□ -0.55
NR1I3-219ENST00000504010 FAM177BA6PVY3 158 aa11.58□□□□□ -0.56
NR1I3-219ENST00000504010 HOXB7P09629 217 aa11.58□□□□□ -0.56
NR1I3-219ENST00000504010 NPR1P16066 1061 aa11.58□□□□□ -0.56
NR1I3-219ENST00000504010 LMOD1P29536 600 aaPredicted RBP11.58□□□□□ -0.56
NR1I3-219ENST00000504010 IL6STP40189 918 aaPredicted RBP11.58□□□□□ -0.56
NR1I3-219ENST00000504010 DGKZQ13574 1117 aa11.58□□□□□ -0.56
NR1I3-219ENST00000504010 HLFQ16534 295 aa11.58□□□□□ -0.56
NR1I3-219ENST00000504010 NPM2Q86SE8 214 aaKnown RBP11.58□□□□□ -0.56
NR1I3-219ENST00000504010 STK31Q9BXU1 1019 aa11.58□□□□□ -0.56
NR1I3-219ENST00000504010 SMC4Q9NTJ3 1288 aa11.58□□□□□ -0.56
NR1I3-219ENST00000504010 DBF4Q9UBU7 674 aaPredicted RBP11.58□□□□□ -0.56
NR1I3-219ENST00000504010 TNNQ9UQP3 1299 aa11.58□□□□□ -0.56
NR1I3-219ENST00000504010 CAMTA2O94983 1202 aa11.57□□□□□ -0.56
NR1I3-219ENST00000504010 IARSP41252 1262 aaKnown RBP11.57□□□□□ -0.56
NR1I3-219ENST00000504010 CACNB1Q02641 598 aaPredicted RBP11.57□□□□□ -0.56
NR1I3-219ENST00000504010 USP50Q70EL3 339 aaPredicted RBP11.57□□□□□ -0.56
NR1I3-219ENST00000504010 MRPL50Q8N5N7 158 aaKnown RBP11.57□□□□□ -0.56
NR1I3-219ENST00000504010 ZNF277Q9NRM2 450 aaPredicted RBP11.57□□□□□ -0.56
NR1I3-219ENST00000504010 KLRG2A4D1S0 409 aaPredicted RBP11.56□□□□□ -0.56
NR1I3-219ENST00000504010 F6X3S4 739 aa11.56□□□□□ -0.56
NR1I3-219ENST00000504010 GPTP24298 496 aa11.56□□□□□ -0.56
NR1I3-219ENST00000504010 RARSP54136 660 aaKnown RBP11.56□□□□□ -0.56
NR1I3-219ENST00000504010 GRM1Q13255 1194 aa11.56□□□□□ -0.56
NR1I3-219ENST00000504010 CST9Q5W186 159 aa11.56□□□□□ -0.56
NR1I3-219ENST00000504010 CCDC24Q8N4L8 307 aa11.56□□□□□ -0.56
NR1I3-219ENST00000504010 JDP2Q8WYK2 163 aa11.56□□□□□ -0.56
NR1I3-219ENST00000504010 EIF6P56537 245 aaKnown RBP11.55□□□□□ -0.56
NR1I3-219ENST00000504010 GRIPAP1Q4V328 841 aa11.55□□□□□ -0.56
NR1I3-219ENST00000504010 KIF6Q6ZMV9 814 aa11.55□□□□□ -0.56
NR1I3-219ENST00000504010 SAPCD2Q86UD0 394 aa11.55□□□□□ -0.56
NR1I3-219ENST00000504010 FRAT1Q92837 279 aaPredicted RBP11.55□□□□□ -0.56
NR1I3-219ENST00000504010 PSMD1Q99460 953 aa11.55□□□□□ -0.56
NR1I3-219ENST00000504010 HYPKQ9NX55 129 aa11.55□□□□□ -0.56
NR1I3-219ENST00000504010 TSKSQ9UJT2 592 aa11.55□□□□□ -0.56
NR1I3-219ENST00000504010 ATP5J2-PTCD1G3V325 749 aa11.54□□□□□ -0.56
NR1I3-219ENST00000504010 PLIN1O60240 522 aa11.54□□□□□ -0.56
NR1I3-219ENST00000504010 AOC2O75106 756 aa11.54□□□□□ -0.56
NR1I3-219ENST00000504010 ALDH1B1P30837 517 aa11.54□□□□□ -0.56
NR1I3-219ENST00000504010 FLIIQ13045 1269 aa11.54□□□□□ -0.56
NR1I3-219ENST00000504010 FKBP5Q13451 457 aaPredicted RBP11.54□□□□□ -0.56
NR1I3-219ENST00000504010 CC2D2BQ6DHV5 1058 aa11.54□□□□□ -0.56
NR1I3-219ENST00000504010 CLEC4GQ6UXB4 293 aa11.54□□□□□ -0.56
NR1I3-219ENST00000504010 RIC3Q7Z5B4 369 aa11.54□□□□□ -0.56
NR1I3-219ENST00000504010 JARID2Q92833 1246 aaPredicted RBP11.54□□□□□ -0.56
NR1I3-219ENST00000504010 MYD88Q99836 296 aa11.54□□□□□ -0.56
NR1I3-219ENST00000504010 NOB1Q9ULX3 412 aaKnown RBP11.54□□□□□ -0.56
NR1I3-219ENST00000504010 ERBB4Q15303 1308 aa11.54□□□□□ -0.56
NR1I3-219ENST00000504010 MAP3K15Q6ZN16 1313 aa11.54□□□□□ -0.56
NR1I3-219ENST00000504010 BCORQ6W2J9 1755 aa11.54□□□□□ -0.56
NR1I3-219ENST00000504010 PI4KAP2A4QPH2 592 aa11.53□□□□□ -0.56
NR1I3-219ENST00000504010 RGL2O15211 777 aa11.53□□□□□ -0.56
NR1I3-219ENST00000504010 NOGQ13253 232 aa11.53□□□□□ -0.56
NR1I3-219ENST00000504010 ANKRD13DQ6ZTN6 518 aa11.53□□□□□ -0.56
NR1I3-219ENST00000504010 NBPF5PQ86XG9 351 aaPredicted RBP11.53□□□□□ -0.56
NR1I3-219ENST00000504010 SYNE4Q8N205 404 aa11.53□□□□□ -0.56
NR1I3-219ENST00000504010 PI4KAP1Q8N8J0 262 aa11.53□□□□□ -0.56
NR1I3-219ENST00000504010 GCC1Q96CN9 775 aa11.53□□□□□ -0.56
NR1I3-219ENST00000504010 RCAN3Q9UKA8 241 aa11.53□□□□□ -0.56
NR1I3-219ENST00000504010 MAP3K2Q9Y2U5 619 aa11.53□□□□□ -0.56
NR1I3-219ENST00000504010 RTL5Q5HYW3 569 aaPredicted RBP11.52□□□□□ -0.57
NR1I3-219ENST00000504010 SLC4A10Q6U841 1118 aa11.52□□□□□ -0.57
NR1I3-219ENST00000504010 CLUAP1Q96AJ1 413 aa11.52□□□□□ -0.57
NR1I3-219ENST00000504010 SAGE1Q9NXZ1 904 aa11.52□□□□□ -0.57
NR1I3-219ENST00000504010 ZNF652Q9Y2D9 606 aa11.52□□□□□ -0.57
NR1I3-219ENST00000504010 GJA3Q9Y6H8 435 aa11.52□□□□□ -0.57
NR1I3-219ENST00000504010 TRAF5O00463 557 aa11.51□□□□□ -0.57
NR1I3-219ENST00000504010 SCNN1DP51172 638 aa11.51□□□□□ -0.57
NR1I3-219ENST00000504010 POLA2Q14181 598 aa11.51□□□□□ -0.57
NR1I3-219ENST00000504010 ALDH1L2Q3SY69 923 aa11.51□□□□□ -0.57
NR1I3-219ENST00000504010 TPTE2Q6XPS3 522 aa11.51□□□□□ -0.57
NR1I3-219ENST00000504010 PLBD2Q8NHP8 589 aa11.51□□□□□ -0.57
NR1I3-219ENST00000504010 ADARB2Q9NS39 739 aaKnown RBP11.51□□□□□ -0.57
NR1I3-219ENST00000504010 NIP7Q9Y221 180 aaKnown RBP eCLIP11.51□□□□□ -0.57
NR1I3-219ENST00000504010 CELF2O95319 508 aaKnown RBP11.5□□□□□ -0.57
NR1I3-219ENST00000504010 EPS15P42566 896 aa11.5□□□□□ -0.57
NR1I3-219ENST00000504010 CWF19L2Q2TBE0 894 aaKnown RBP11.5□□□□□ -0.57
NR1I3-219ENST00000504010 CIAPIN1Q6FI81 312 aa11.5□□□□□ -0.57
NR1I3-219ENST00000504010 KSR2Q6VAB6 950 aa11.5□□□□□ -0.57
NR1I3-219ENST00000504010 GIGYF2Q6Y7W6 1299 aaKnown RBP11.5□□□□□ -0.57
NR1I3-219ENST00000504010 UBN2Q6ZU65 1347 aa11.5□□□□□ -0.57
NR1I3-219ENST00000504010 SNED1Q8TER0 1413 aa11.5□□□□□ -0.57
NR1I3-219ENST00000504010 NUP98P52948 1817 aa11.49□□□□□ -0.57
NR1I3-219ENST00000504010 ABCB7O75027 752 aa11.49□□□□□ -0.57
NR1I3-219ENST00000504010 DDX58O95786 925 aaKnown RBP11.49□□□□□ -0.57
NR1I3-219ENST00000504010 CT47B1P0C2W7 299 aaPredicted RBP11.49□□□□□ -0.57
NR1I3-219ENST00000504010 SOX10P56693 466 aa11.49□□□□□ -0.57
NR1I3-219ENST00000504010 FMR1Q06787 632 aaKnown RBP eCLIP11.49□□□□□ -0.57
NR1I3-219ENST00000504010 TCIRG1Q13488 830 aa11.49□□□□□ -0.57
NR1I3-219ENST00000504010 SUSD4Q5VX71 490 aa11.49□□□□□ -0.57
NR1I3-219ENST00000504010 NUTM1Q86Y26 1132 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms