RNA–Protein interactions for RNA: ENST00000503884.5

PROM1-204, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-204ENST00000503884 DEFB115Q30KQ5 88 aa11.79□□□□□ -0.52
PROM1-204ENST00000503884 HSP90AB3PQ58FF7 597 aa11.79□□□□□ -0.52
PROM1-204ENST00000503884 USP50Q70EL3 339 aaPredicted RBP11.79□□□□□ -0.52
PROM1-204ENST00000503884 SP8Q8IXZ3 490 aa11.79□□□□□ -0.52
PROM1-204ENST00000503884 COL4A1P02462 1669 aa11.78□□□□□ -0.52
PROM1-204ENST00000503884 TCERG1O14776 1098 aaKnown RBP11.78□□□□□ -0.52
PROM1-204ENST00000503884 HOXB7P09629 217 aa11.78□□□□□ -0.52
PROM1-204ENST00000503884 LMOD1P29536 600 aaPredicted RBP11.78□□□□□ -0.52
PROM1-204ENST00000503884 FMR1Q06787 632 aaKnown RBP eCLIP11.78□□□□□ -0.52
PROM1-204ENST00000503884 CXCL9Q07325 125 aa11.78□□□□□ -0.52
PROM1-204ENST00000503884 NIM1KQ8IY84 436 aa11.78□□□□□ -0.52
PROM1-204ENST00000503884 GPRC5DQ9NZD1 345 aa11.78□□□□□ -0.52
PROM1-204ENST00000503884 ZNRF3Q9ULT6 936 aa11.78□□□□□ -0.52
PROM1-204ENST00000503884 MYBBP1AQ9BQG0 1328 aaKnown RBP11.78□□□□□ -0.52
PROM1-204ENST00000503884 HCLS1P14317 486 aaPredicted RBP11.77□□□□□ -0.53
PROM1-204ENST00000503884 CTCFP49711 727 aaPredicted RBP11.77□□□□□ -0.53
PROM1-204ENST00000503884 KIAA2012Q0VF49 1180 aa11.77□□□□□ -0.53
PROM1-204ENST00000503884 AIMP1Q12904 312 aaKnown RBP11.77□□□□□ -0.53
PROM1-204ENST00000503884 GRAPQ13588 217 aa11.77□□□□□ -0.53
PROM1-204ENST00000503884 CST9Q5W186 159 aa11.77□□□□□ -0.53
PROM1-204ENST00000503884 SUPT20HQ8NEM7 779 aa11.77□□□□□ -0.53
PROM1-204ENST00000503884 GRAPLQ8TC17 118 aaPredicted RBP11.77□□□□□ -0.53
PROM1-204ENST00000503884 NECTIN2Q92692 538 aa11.77□□□□□ -0.53
PROM1-204ENST00000503884 ISCA1Q9BUE6 129 aa11.77□□□□□ -0.53
PROM1-204ENST00000503884 PGAP2Q9UHJ9 254 aa11.77□□□□□ -0.53
PROM1-204ENST00000503884 SH3TC1Q8TE82 1336 aa11.77□□□□□ -0.53
PROM1-204ENST00000503884 WDR33Q9C0J8 1336 aaKnown RBP11.77□□□□□ -0.53
PROM1-204ENST00000503884 DPP8Q6V1X1 898 aaPredicted RBP11.76□□□□□ -0.53
PROM1-204ENST00000503884 CCDC146Q8IYE0 955 aa11.76□□□□□ -0.53
PROM1-204ENST00000503884 MPNDQ8N594 471 aa11.76□□□□□ -0.53
PROM1-204ENST00000503884 RUNDC1Q96C34 613 aa11.76□□□□□ -0.53
PROM1-204ENST00000503884 ADARB2Q9NS39 739 aaKnown RBP11.76□□□□□ -0.53
PROM1-204ENST00000503884 CHPF2Q9P2E5 772 aa11.76□□□□□ -0.53
PROM1-204ENST00000503884 TRMT112Q9UI30 125 aaKnown RBP11.76□□□□□ -0.53
PROM1-204ENST00000503884 CDHR2Q9BYE9 1310 aa11.76□□□□□ -0.53
PROM1-204ENST00000503884 HSPA8P11142 646 aaKnown RBP11.75□□□□□ -0.53
PROM1-204ENST00000503884 GMPSP49915 693 aaPredicted RBP11.75□□□□□ -0.53
PROM1-204ENST00000503884 SF3B3Q15393 1217 aaKnown RBP11.75□□□□□ -0.53
PROM1-204ENST00000503884 NEUROD2Q15784 382 aa11.75□□□□□ -0.53
PROM1-204ENST00000503884 DDX46Q7L014 1031 aaKnown RBP11.75□□□□□ -0.53
PROM1-204ENST00000503884 PLBD2Q8NHP8 589 aa11.75□□□□□ -0.53
PROM1-204ENST00000503884 POLR2AP24928 1970 aaKnown RBP11.74□□□□□ -0.53
PROM1-204ENST00000503884 YDJCA8MPS7 323 aa11.74□□□□□ -0.53
PROM1-204ENST00000503884 TRAF5O00463 557 aa11.74□□□□□ -0.53
PROM1-204ENST00000503884 LBX1P52954 281 aa11.74□□□□□ -0.53
PROM1-204ENST00000503884 HIRAP54198 1017 aaPredicted RBP11.74□□□□□ -0.53
PROM1-204ENST00000503884 MAP2K1Q02750 393 aaPredicted RBP11.74□□□□□ -0.53
PROM1-204ENST00000503884 TRIM28Q13263 835 aaKnown RBP11.74□□□□□ -0.53
PROM1-204ENST00000503884 HDGFL1Q5TGJ6 251 aa11.74□□□□□ -0.53
PROM1-204ENST00000503884 CIAPIN1Q6FI81 312 aa11.74□□□□□ -0.53
PROM1-204ENST00000503884 TMC4Q7Z404 712 aa11.74□□□□□ -0.53
PROM1-204ENST00000503884 AIDAQ96BJ3 306 aa11.74□□□□□ -0.53
PROM1-204ENST00000503884 CFAP44Q96MT7 982 aa11.74□□□□□ -0.53
PROM1-204ENST00000503884 TMX4Q9H1E5 349 aaPredicted RBP11.74□□□□□ -0.53
PROM1-204ENST00000503884 ABT1Q9ULW3 272 aaKnown RBP11.74□□□□□ -0.53
PROM1-204ENST00000503884 ADAMTS8Q9UP79 889 aa11.74□□□□□ -0.53
PROM1-204ENST00000503884 TLL2Q9Y6L7 1015 aa11.74□□□□□ -0.53
PROM1-204ENST00000503884 ZNF853P0CG23 659 aa11.73□□□□□ -0.53
PROM1-204ENST00000503884 SCN9AQ15858 1988 aa11.73□□□□□ -0.53
PROM1-204ENST00000503884 ANKRD13DQ6ZTN6 518 aa11.73□□□□□ -0.53
PROM1-204ENST00000503884 ZC3H15Q8WU90 426 aaKnown RBP11.73□□□□□ -0.53
PROM1-204ENST00000503884 CELF1Q92879 486 aaKnown RBP11.73□□□□□ -0.53
PROM1-204ENST00000503884 CAPNS2Q96L46 248 aa11.73□□□□□ -0.53
PROM1-204ENST00000503884 DBF4Q9UBU7 674 aaPredicted RBP11.73□□□□□ -0.53
PROM1-204ENST00000503884 RAD17O75943 681 aa11.72□□□□□ -0.53
PROM1-204ENST00000503884 TNIP1Q15025 636 aa11.72□□□□□ -0.53
PROM1-204ENST00000503884 CYP4F22Q6NT55 531 aa11.72□□□□□ -0.53
PROM1-204ENST00000503884 SAPCD2Q86UD0 394 aa11.72□□□□□ -0.53
PROM1-204ENST00000503884 FAM89AQ96GI7 184 aa11.72□□□□□ -0.53
PROM1-204ENST00000503884 PSME4Q14997 1843 aa11.72□□□□□ -0.53
PROM1-204ENST00000503884 SHTN1A0MZ66 631 aa11.71□□□□□ -0.53
PROM1-204ENST00000503884 ATP5J2-PTCD1G3V325 749 aa11.71□□□□□ -0.53
PROM1-204ENST00000503884 ECE1P42892 770 aa11.71□□□□□ -0.53
PROM1-204ENST00000503884 WDR43Q15061 677 aaKnown RBP eCLIP11.71□□□□□ -0.53
PROM1-204ENST00000503884 DUSP27Q5VZP5 1158 aa11.71□□□□□ -0.53
PROM1-204ENST00000503884 TRPM4Q8TD43 1214 aa11.71□□□□□ -0.53
PROM1-204ENST00000503884 HHIPL1Q96JK4 782 aa11.71□□□□□ -0.53
PROM1-204ENST00000503884 GLIS2Q9BZE0 524 aaPredicted RBP11.71□□□□□ -0.53
PROM1-204ENST00000503884 MBIPQ9NS73 344 aa11.71□□□□□ -0.53
PROM1-204ENST00000503884 HYPKQ9NX55 129 aa11.71□□□□□ -0.53
PROM1-204ENST00000503884 CNOT7Q9UIV1 285 aaKnown RBP11.71□□□□□ -0.53
PROM1-204ENST00000503884 LAS1LQ9Y4W2 734 aaKnown RBP11.71□□□□□ -0.53
PROM1-204ENST00000503884 MAP2K2P36507 400 aa11.7□□□□□ -0.54
PROM1-204ENST00000503884 DPF2Q92785 391 aa11.7□□□□□ -0.54
PROM1-204ENST00000503884 ZNF428Q96B54 188 aa11.7□□□□□ -0.54
PROM1-204ENST00000503884 GPR101Q96P66 508 aaPredicted RBP11.7□□□□□ -0.54
PROM1-204ENST00000503884 PRKRIP1Q9H875 184 aaPredicted RBP11.7□□□□□ -0.54
PROM1-204ENST00000503884 POLLQ9UGP5 575 aa11.7□□□□□ -0.54
PROM1-204ENST00000503884 CELF2O95319 508 aaKnown RBP11.69□□□□□ -0.54
PROM1-204ENST00000503884 GPSM2P81274 684 aa11.69□□□□□ -0.54
PROM1-204ENST00000503884 WASHC4Q2M389 1173 aa11.69□□□□□ -0.54
PROM1-204ENST00000503884 CDC37L1Q7L3B6 337 aa11.69□□□□□ -0.54
PROM1-204ENST00000503884 BCL2L13Q9BXK5 485 aa11.69□□□□□ -0.54
PROM1-204ENST00000503884 PODXL2Q9NZ53 605 aa11.69□□□□□ -0.54
PROM1-204ENST00000503884 RTL9Q8NET4 1388 aa11.68□□□□□ -0.54
PROM1-204ENST00000503884 PSMD14O00487 310 aa11.68□□□□□ -0.54
PROM1-204ENST00000503884 IRS4O14654 1257 aaPredicted RBP11.68□□□□□ -0.54
PROM1-204ENST00000503884 AOC2O75106 756 aa11.68□□□□□ -0.54
PROM1-204ENST00000503884 MICALL2Q8IY33 904 aa11.68□□□□□ -0.54
PROM1-204ENST00000503884 ZBTB38Q8NAP3 1195 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms