RNA–Protein interactions for RNA: ENST00000503180.5

DDR1-248, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-248ENST00000503180 ARFGEF1Q9Y6D6 1849 aa19.96■□□□□ 0.79
DDR1-248ENST00000503180 ABCC4O15439 1325 aa19.96■□□□□ 0.79
DDR1-248ENST00000503180 COL11A2P13942 1736 aaPredicted RBP19.96■□□□□ 0.79
DDR1-248ENST00000503180 TNRC6CQ9HCJ0 1690 aaKnown RBP19.95■□□□□ 0.78
DDR1-248ENST00000503180 CTSWP56202 376 aa19.95■□□□□ 0.78
DDR1-248ENST00000503180 PLA2G12BQ9BX93 195 aa19.95■□□□□ 0.78
DDR1-248ENST00000503180 CASP7P55210 303 aa19.94■□□□□ 0.78
DDR1-248ENST00000503180 RPS8P62241 208 aaKnown RBP19.94■□□□□ 0.78
DDR1-248ENST00000503180 SP8Q8IXZ3 490 aa19.94■□□□□ 0.78
DDR1-248ENST00000503180 TTLL11Q8NHH1 800 aa19.94■□□□□ 0.78
DDR1-248ENST00000503180 ATP6V0A2Q9Y487 856 aa19.94■□□□□ 0.78
DDR1-248ENST00000503180 SLX4Q8IY92 1834 aa19.94■□□□□ 0.78
DDR1-248ENST00000503180 LMNB1P20700 586 aa19.93■□□□□ 0.78
DDR1-248ENST00000503180 ZKSCAN2Q63HK3 967 aa19.93■□□□□ 0.78
DDR1-248ENST00000503180 ATF7IPQ6VMQ6 1270 aa19.93■□□□□ 0.78
DDR1-248ENST00000503180 TAOK3Q9H2K8 898 aa19.93■□□□□ 0.78
DDR1-248ENST00000503180 HDAC5Q9UQL6 1122 aa19.93■□□□□ 0.78
DDR1-248ENST00000503180 CCDC85AQ96PX6 553 aaPredicted RBP19.92■□□□□ 0.78
DDR1-248ENST00000503180 CDC5LQ99459 802 aaKnown RBP19.92■□□□□ 0.78
DDR1-248ENST00000503180 CHD4Q14839 1912 aa19.92■□□□□ 0.78
DDR1-248ENST00000503180 CSF1RP07333 972 aa19.91■□□□□ 0.78
DDR1-248ENST00000503180 C9orf131Q5VYM1 1079 aa19.91■□□□□ 0.78
DDR1-248ENST00000503180 LTBP3Q9NS15 1303 aa19.91■□□□□ 0.78
DDR1-248ENST00000503180 DDX60Q8IY21 1712 aaKnown RBP19.9■□□□□ 0.78
DDR1-248ENST00000503180 NFKBIEO00221 500 aa19.9■□□□□ 0.78
DDR1-248ENST00000503180 NBPF7P0C2Y1 421 aaPredicted RBP19.9■□□□□ 0.78
DDR1-248ENST00000503180 FKBP4Q02790 459 aaKnown RBP eCLIP19.9■□□□□ 0.78
DDR1-248ENST00000503180 ANKRD18AQ8IVF6 992 aa19.9■□□□□ 0.78
DDR1-248ENST00000503180 CELF1Q92879 486 aaKnown RBP19.9■□□□□ 0.78
DDR1-248ENST00000503180 USP44Q9H0E7 712 aa19.9■□□□□ 0.78
DDR1-248ENST00000503180 SEC31BQ9NQW1 1179 aa19.9■□□□□ 0.78
DDR1-248ENST00000503180 RNF181Q9P0P0 153 aa19.9■□□□□ 0.78
DDR1-248ENST00000503180 UTYO14607 1347 aa19.9■□□□□ 0.78
DDR1-248ENST00000503180 TRIM27P14373 513 aa19.89■□□□□ 0.77
DDR1-248ENST00000503180 RASSF7Q02833 373 aa19.89■□□□□ 0.77
DDR1-248ENST00000503180 INTS3Q68E01 1043 aaKnown RBP19.89■□□□□ 0.77
DDR1-248ENST00000503180 OLFM4Q6UX06 510 aa19.89■□□□□ 0.77
DDR1-248ENST00000503180 PSMD1Q99460 953 aa19.89■□□□□ 0.77
DDR1-248ENST00000503180 GREM2Q9H772 168 aa19.89■□□□□ 0.77
DDR1-248ENST00000503180 RCAN3Q9UKA8 241 aa19.89■□□□□ 0.77
DDR1-248ENST00000503180 RTL9Q8NET4 1388 aa19.88■□□□□ 0.77
DDR1-248ENST00000503180 FOXO4P98177 505 aa19.88■□□□□ 0.77
DDR1-248ENST00000503180 LMBR1LQ6UX01 489 aa19.88■□□□□ 0.77
DDR1-248ENST00000503180 MPNDQ8N594 471 aa19.88■□□□□ 0.77
DDR1-248ENST00000503180 SUPT20HQ8NEM7 779 aa19.88■□□□□ 0.77
DDR1-248ENST00000503180 CHMP3Q9Y3E7 222 aa19.88■□□□□ 0.77
DDR1-248ENST00000503180 LAMB2P55268 1798 aa19.88■□□□□ 0.77
DDR1-248ENST00000503180 ANKRD18BA2A2Z9 1011 aa19.87■□□□□ 0.77
DDR1-248ENST00000503180 MS4A1P11836 297 aa19.87■□□□□ 0.77
DDR1-248ENST00000503180 IFIT5Q13325 482 aaKnown RBP19.87■□□□□ 0.77
DDR1-248ENST00000503180 DPP8Q6V1X1 898 aaPredicted RBP19.87■□□□□ 0.77
DDR1-248ENST00000503180 FTSJ3Q8IY81 847 aaKnown RBP19.87■□□□□ 0.77
DDR1-248ENST00000503180 CLUAP1Q96AJ1 413 aa19.87■□□□□ 0.77
DDR1-248ENST00000503180 CACNA1SQ13698 1873 aa19.87■□□□□ 0.77
DDR1-248ENST00000503180 ITGA6P23229 1130 aa19.86■□□□□ 0.77
DDR1-248ENST00000503180 IGHMBP2P38935 993 aaKnown RBP19.86■□□□□ 0.77
DDR1-248ENST00000503180 CCDC57Q2TAC2 916 aa19.86■□□□□ 0.77
DDR1-248ENST00000503180 VPS33BQ9H267 617 aa19.86■□□□□ 0.77
DDR1-248ENST00000503180 NSFL1CQ9UNZ2 370 aaKnown RBP19.86■□□□□ 0.77
DDR1-248ENST00000503180 UBTFL1P0CB47 393 aaPredicted RBP19.85■□□□□ 0.77
DDR1-248ENST00000503180 SUCLG2Q96I99 432 aa19.85■□□□□ 0.77
DDR1-248ENST00000503180 MPHOSPH8Q99549 860 aa19.85■□□□□ 0.77
DDR1-248ENST00000503180 BSDC1Q9NW68 430 aaPredicted RBP19.85■□□□□ 0.77
DDR1-248ENST00000503180 ZC3H4Q9UPT8 1303 aaKnown RBP19.84■□□□□ 0.77
DDR1-248ENST00000503180 GNAI3P08754 354 aa19.84■□□□□ 0.77
DDR1-248ENST00000503180 FAM161AQ3B820 660 aa19.84■□□□□ 0.77
DDR1-248ENST00000503180 TAF7LQ5H9L4 462 aa19.84■□□□□ 0.77
DDR1-248ENST00000503180 DZIP1LQ8IYY4 767 aaKnown RBP19.84■□□□□ 0.77
DDR1-248ENST00000503180 ZNF277Q9NRM2 450 aaPredicted RBP19.84■□□□□ 0.77
DDR1-248ENST00000503180 ANKIB1Q9P2G1 1089 aa19.84■□□□□ 0.77
DDR1-248ENST00000503180 IARSP41252 1262 aaKnown RBP19.83■□□□□ 0.77
DDR1-248ENST00000503180 EPHA10Q5JZY3 1008 aa19.83■□□□□ 0.77
DDR1-248ENST00000503180 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.83■□□□□ 0.77
DDR1-248ENST00000503180 JDP2Q8WYK2 163 aa19.83■□□□□ 0.77
DDR1-248ENST00000503180 RTFDC1Q9BY42 306 aaPredicted RBP19.83■□□□□ 0.77
DDR1-248ENST00000503180 BICC1Q9H694 974 aaKnown RBP19.83■□□□□ 0.77
DDR1-248ENST00000503180 FER1L6Q2WGJ9 1857 aa19.83■□□□□ 0.76
DDR1-248ENST00000503180 PRELPP51888 382 aa19.82■□□□□ 0.76
DDR1-248ENST00000503180 DPY19L2Q6NUT2 758 aa19.82■□□□□ 0.76
DDR1-248ENST00000503180 KAZALD1Q96I82 304 aa19.82■□□□□ 0.76
DDR1-248ENST00000503180 MYH3P11055 1940 aa19.82■□□□□ 0.76
DDR1-248ENST00000503180 C6orf229H3BNL8 230 aa19.81■□□□□ 0.76
DDR1-248ENST00000503180 RABL6Q3YEC7 729 aaPredicted RBP19.81■□□□□ 0.76
DDR1-248ENST00000503180 PODXL2Q9NZ53 605 aa19.81■□□□□ 0.76
DDR1-248ENST00000503180 TAF1P21675 1872 aa19.8■□□□□ 0.76
DDR1-248ENST00000503180 GPSM2P81274 684 aa19.8■□□□□ 0.76
DDR1-248ENST00000503180 LARGE2Q8N3Y3 721 aa19.8■□□□□ 0.76
DDR1-248ENST00000503180 TMEM57Q8N5G2 664 aa19.8■□□□□ 0.76
DDR1-248ENST00000503180 ZNF784Q8NCA9 323 aaPredicted RBP19.8■□□□□ 0.76
DDR1-248ENST00000503180 EYA3Q99504 573 aa19.8■□□□□ 0.76
DDR1-248ENST00000503180 ANKRD2Q9GZV1 360 aa19.8■□□□□ 0.76
DDR1-248ENST00000503180 MINPP1Q9UNW1 487 aa19.8■□□□□ 0.76
DDR1-248ENST00000503180 TNNQ9UQP3 1299 aa19.8■□□□□ 0.76
DDR1-248ENST00000503180 SBF1O95248 1867 aa19.79■□□□□ 0.76
DDR1-248ENST00000503180 PPIP5K2O43314 1243 aa19.79■□□□□ 0.76
DDR1-248ENST00000503180 WASHC4Q2M389 1173 aa19.79■□□□□ 0.76
DDR1-248ENST00000503180 LDHAL6AQ6ZMR3 332 aa19.79■□□□□ 0.76
DDR1-248ENST00000503180 MEIS3Q99687 375 aa19.79■□□□□ 0.76
DDR1-248ENST00000503180 GGA1Q9UJY5 639 aa19.79■□□□□ 0.76
DDR1-248ENST00000503180 XDHP47989 1333 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms