RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 LEO1Q8WVC0 666 aaPredicted RBP29.02■■■□□ 2.24
DDX41-202ENST00000503078 CBX8Q9HC52 389 aa29.02■■■□□ 2.24
DDX41-202ENST00000503078 TFIP11Q9UBB9 837 aaKnown RBP29.02■■■□□ 2.24
DDX41-202ENST00000503078 PXDNQ92626 1479 aa29.02■■■□□ 2.24
DDX41-202ENST00000503078 PRAMEF22A3QJZ6 481 aa29.02■■■□□ 2.24
DDX41-202ENST00000503078 DDX58O95786 925 aaKnown RBP29.02■■■□□ 2.24
DDX41-202ENST00000503078 FAM177BA6PVY3 158 aa29.01■■■□□ 2.23
DDX41-202ENST00000503078 RBM33Q96EV2 1170 aaKnown RBP29.01■■■□□ 2.23
DDX41-202ENST00000503078 CLSTN2Q9H4D0 955 aa29.01■■■□□ 2.23
DDX41-202ENST00000503078 RIOK3O14730 519 aaKnown RBP29.01■■■□□ 2.23
DDX41-202ENST00000503078 PHRF1Q9P1Y6 1649 aaKnown RBP29■■■□□ 2.23
DDX41-202ENST00000503078 ZNF589Q86UQ0 364 aaPredicted RBP28.99■■■□□ 2.23
DDX41-202ENST00000503078 SIL1Q9H173 461 aa28.99■■■□□ 2.23
DDX41-202ENST00000503078 STK3Q13188 491 aa28.98■■■□□ 2.23
DDX41-202ENST00000503078 DDX21Q9NR30 783 aaKnown RBP eCLIP28.98■■■□□ 2.23
DDX41-202ENST00000503078 TAF5LO75529 589 aa28.97■■■□□ 2.23
DDX41-202ENST00000503078 CCDC186Q7Z3E2 898 aa28.97■■■□□ 2.23
DDX41-202ENST00000503078 AIMP1Q12904 312 aaKnown RBP28.97■■■□□ 2.23
DDX41-202ENST00000503078 KRT32Q14532 448 aa28.97■■■□□ 2.23
DDX41-202ENST00000503078 TDRD7Q8NHU6 1098 aaKnown RBP28.97■■■□□ 2.23
DDX41-202ENST00000503078 USPL1Q5W0Q7 1092 aa28.96■■■□□ 2.23
DDX41-202ENST00000503078 ARHGAP30Q7Z6I6 1101 aaPredicted RBP28.96■■■□□ 2.23
DDX41-202ENST00000503078 PLA2G4DQ86XP0 818 aa28.96■■■□□ 2.23
DDX41-202ENST00000503078 MRC1P22897 1456 aa28.96■■■□□ 2.23
DDX41-202ENST00000503078 ZNF75DP51815 510 aa28.95■■■□□ 2.23
DDX41-202ENST00000503078 GTF3C6Q969F1 213 aa28.95■■■□□ 2.23
DDX41-202ENST00000503078 NR1I2O75469 434 aa28.95■■■□□ 2.22
DDX41-202ENST00000503078 IGKV5-2P06315 115 aa28.95■■■□□ 2.22
DDX41-202ENST00000503078 PPP4R3BQ5MIZ7 849 aa28.95■■■□□ 2.22
DDX41-202ENST00000503078 DRC7Q8IY82 874 aa28.95■■■□□ 2.22
DDX41-202ENST00000503078 BICD2Q8TD16 824 aa28.95■■■□□ 2.22
DDX41-202ENST00000503078 PGBD1Q96JS3 809 aa28.95■■■□□ 2.22
DDX41-202ENST00000503078 TRIM5Q9C035 493 aa28.95■■■□□ 2.22
DDX41-202ENST00000503078 CTIFO43310 598 aaKnown RBP28.94■■■□□ 2.22
DDX41-202ENST00000503078 KLHDC4Q8TBB5 520 aa28.94■■■□□ 2.22
DDX41-202ENST00000503078 PSME1Q06323 249 aa28.94■■■□□ 2.22
DDX41-202ENST00000503078 PDIA6Q15084 440 aa28.93■■■□□ 2.22
DDX41-202ENST00000503078 SIPA1L3O60292 1781 aaPredicted RBP28.93■■■□□ 2.22
DDX41-202ENST00000503078 JAK2O60674 1132 aa28.93■■■□□ 2.22
DDX41-202ENST00000503078 RESTQ13127 1097 aa28.93■■■□□ 2.22
DDX41-202ENST00000503078 RIC3Q7Z5B4 369 aa28.93■■■□□ 2.22
DDX41-202ENST00000503078 PDCL2Q8N4E4 241 aa28.93■■■□□ 2.22
DDX41-202ENST00000503078 ANKRD7Q92527 254 aa28.93■■■□□ 2.22
DDX41-202ENST00000503078 PRDM10Q9NQV6 1147 aa28.93■■■□□ 2.22
DDX41-202ENST00000503078 ZNF165P49910 485 aa28.92■■■□□ 2.22
DDX41-202ENST00000503078 NEK1Q96PY6 1258 aa28.92■■■□□ 2.22
DDX41-202ENST00000503078 EDC3Q96F86 508 aaKnown RBP28.91■■■□□ 2.22
DDX41-202ENST00000503078 LRMPQ12912 555 aa28.91■■■□□ 2.22
DDX41-202ENST00000503078 BRF1Q92994 677 aa28.91■■■□□ 2.22
DDX41-202ENST00000503078 NRBP1Q9UHY1 535 aa28.91■■■□□ 2.22
DDX41-202ENST00000503078 CAVIN2O95810 425 aa28.9■■■□□ 2.22
DDX41-202ENST00000503078 ZSCAN25Q6NSZ9 544 aa28.9■■■□□ 2.22
DDX41-202ENST00000503078 DNAJC25Q9H1X3 360 aa28.9■■■□□ 2.22
DDX41-202ENST00000503078 NEXNQ0ZGT2 675 aa28.9■■■□□ 2.22
DDX41-202ENST00000503078 ESCO1Q5FWF5 840 aa28.9■■■□□ 2.22
DDX41-202ENST00000503078 ZSCAN16Q9H4T2 348 aaPredicted RBP28.9■■■□□ 2.22
DDX41-202ENST00000503078 COL15A1P39059 1388 aa28.9■■■□□ 2.22
DDX41-202ENST00000503078 NEURL1BA8MQ27 555 aa28.89■■■□□ 2.22
DDX41-202ENST00000503078 ATP5JP18859 108 aa28.89■■■□□ 2.22
DDX41-202ENST00000503078 H3BQV1 296 aa28.88■■■□□ 2.21
DDX41-202ENST00000503078 IFFO2Q5TF58 517 aa28.88■■■□□ 2.21
DDX41-202ENST00000503078 CFAP45Q9UL16 551 aa28.88■■■□□ 2.21
DDX41-202ENST00000503078 CBX1P83916 185 aa28.88■■■□□ 2.21
DDX41-202ENST00000503078 GCKRQ14397 625 aa28.88■■■□□ 2.21
DDX41-202ENST00000503078 ATP2B3Q16720 1220 aa28.88■■■□□ 2.21
DDX41-202ENST00000503078 EPHA10Q5JZY3 1008 aa28.88■■■□□ 2.21
DDX41-202ENST00000503078 Q6ZUG5 572 aa28.88■■■□□ 2.21
DDX41-202ENST00000503078 ARHGEF25Q86VW2 580 aa28.87■■■□□ 2.21
DDX41-202ENST00000503078 DBNLQ9UJU6 430 aaKnown RBP28.87■■■□□ 2.21
DDX41-202ENST00000503078 U3KPZ7 1027 aaPredicted RBP28.87■■■□□ 2.21
DDX41-202ENST00000503078 RFX7Q2KHR2 1363 aa28.87■■■□□ 2.21
DDX41-202ENST00000503078 ZSCAN20P17040 1043 aaPredicted RBP28.87■■■□□ 2.21
DDX41-202ENST00000503078 ANKRD24Q8TF21 1146 aa28.87■■■□□ 2.21
DDX41-202ENST00000503078 COPRSQ9NQ92 184 aa28.87■■■□□ 2.21
DDX41-202ENST00000503078 HSP90B1P14625 803 aaKnown RBP28.86■■■□□ 2.21
DDX41-202ENST00000503078 DMTNQ08495 405 aa28.86■■■□□ 2.21
DDX41-202ENST00000503078 UTP14CQ5TAP6 766 aaKnown RBP28.86■■■□□ 2.21
DDX41-202ENST00000503078 CLIP2Q9UDT6 1046 aa28.86■■■□□ 2.21
DDX41-202ENST00000503078 GCP02774 474 aa28.86■■■□□ 2.21
DDX41-202ENST00000503078 CDC25BP30305 580 aa28.86■■■□□ 2.21
DDX41-202ENST00000503078 TNNI3KQ59H18 835 aa28.85■■■□□ 2.21
DDX41-202ENST00000503078 DDX11Q96FC9 970 aa28.85■■■□□ 2.21
DDX41-202ENST00000503078 C16orf45Q96MC5 204 aaPredicted RBP28.85■■■□□ 2.21
DDX41-202ENST00000503078 FPGT-TNNI3KV9GXZ4 949 aa28.85■■■□□ 2.21
DDX41-202ENST00000503078 SMTNL1A8MU46 457 aa28.84■■■□□ 2.21
DDX41-202ENST00000503078 ADAMTS7Q9UKP4 1686 aa28.84■■■□□ 2.21
DDX41-202ENST00000503078 ZNF609O15014 1411 aa28.84■■■□□ 2.21
DDX41-202ENST00000503078 LMTK3Q96Q04 1460 aa28.84■■■□□ 2.21
DDX41-202ENST00000503078 MYD88Q99836 296 aa28.83■■■□□ 2.21
DDX41-202ENST00000503078 METTL22Q9BUU2 404 aaPredicted RBP28.83■■■□□ 2.21
DDX41-202ENST00000503078 CYP21A2P08686 494 aa28.83■■■□□ 2.21
DDX41-202ENST00000503078 SMARCC2Q8TAQ2 1214 aa28.83■■■□□ 2.21
DDX41-202ENST00000503078 CACTINQ8WUQ7 758 aaKnown RBP28.83■■■□□ 2.21
DDX41-202ENST00000503078 TNNT1P13805 278 aa28.82■■■□□ 2.2
DDX41-202ENST00000503078 MYL6BP14649 208 aa28.82■■■□□ 2.2
DDX41-202ENST00000503078 SCRN1Q12765 414 aa28.82■■■□□ 2.2
DDX41-202ENST00000503078 SYCP1Q15431 976 aa28.82■■■□□ 2.2
DDX41-202ENST00000503078 XAGE3Q8WTP9 111 aa28.82■■■□□ 2.2
DDX41-202ENST00000503078 LLPHQ9BRT6 129 aaKnown RBP28.82■■■□□ 2.2
DDX41-202ENST00000503078 RFX5P48382 616 aaPredicted RBP28.82■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms