RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 KIAA1211Q6ZU35 1233 aa13.96□□□□□ -0.17
USP46-204ENST00000503060 FPGT-TNNI3KV9GXZ4 949 aa13.96□□□□□ -0.17
USP46-204ENST00000503060 PHLPP1O60346 1717 aa13.95□□□□□ -0.18
USP46-204ENST00000503060 DDX11L8A8MPP1 907 aa13.95□□□□□ -0.18
USP46-204ENST00000503060 TCIRG1Q13488 830 aa13.95□□□□□ -0.18
USP46-204ENST00000503060 BOLA2Q9H3K6 86 aa13.95□□□□□ -0.18
USP46-204ENST00000503060 CHMP3Q9Y3E7 222 aa13.95□□□□□ -0.18
USP46-204ENST00000503060 HIP1O00291 1037 aa13.94□□□□□ -0.18
USP46-204ENST00000503060 KIF6Q6ZMV9 814 aa13.94□□□□□ -0.18
USP46-204ENST00000503060 GBP4Q96PP9 640 aa13.94□□□□□ -0.18
USP46-204ENST00000503060 DBNLQ9UJU6 430 aaKnown RBP13.94□□□□□ -0.18
USP46-204ENST00000503060 ZNF330Q9Y3S2 320 aaPredicted RBP13.94□□□□□ -0.18
USP46-204ENST00000503060 PATL2C9JE40 543 aaKnown RBP13.94□□□□□ -0.18
USP46-204ENST00000503060 ADAMTS2O95450 1211 aa13.94□□□□□ -0.18
USP46-204ENST00000503060 SSFA2P28290 1259 aa13.94□□□□□ -0.18
USP46-204ENST00000503060 IL27Q8NEV9 243 aa13.94□□□□□ -0.18
USP46-204ENST00000503060 CDCA7Q9BWT1 371 aaPredicted RBP13.94□□□□□ -0.18
USP46-204ENST00000503060 NRAPQ86VF7 1730 aa13.94□□□□□ -0.18
USP46-204ENST00000503060 TRIM28Q13263 835 aaKnown RBP13.93□□□□□ -0.18
USP46-204ENST00000503060 TMX3Q96JJ7 454 aa13.93□□□□□ -0.18
USP46-204ENST00000503060 SLC4A9Q96Q91 983 aa13.93□□□□□ -0.18
USP46-204ENST00000503060 SNX14Q9Y5W7 946 aa13.93□□□□□ -0.18
USP46-204ENST00000503060 ATP5JP18859 108 aa13.93□□□□□ -0.18
USP46-204ENST00000503060 NUCB2P80303 420 aa13.93□□□□□ -0.18
USP46-204ENST00000503060 SPATA31A1Q5TZJ5 1347 aa13.92□□□□□ -0.18
USP46-204ENST00000503060 PHF14O94880 888 aa13.92□□□□□ -0.18
USP46-204ENST00000503060 ZGPATQ8N5A5 531 aaKnown RBP13.92□□□□□ -0.18
USP46-204ENST00000503060 UPF3BQ9BZI7 483 aaKnown RBP13.92□□□□□ -0.18
USP46-204ENST00000503060 CYP19A1P11511 503 aaPredicted RBP13.92□□□□□ -0.18
USP46-204ENST00000503060 PTH1RQ03431 593 aa13.92□□□□□ -0.18
USP46-204ENST00000503060 NMIQ13287 307 aaPredicted RBP13.92□□□□□ -0.18
USP46-204ENST00000503060 ATG9AQ7Z3C6 839 aa13.92□□□□□ -0.18
USP46-204ENST00000503060 PIAS4Q8N2W9 510 aaPredicted RBP13.92□□□□□ -0.18
USP46-204ENST00000503060 SYTL4Q96C24 671 aaPredicted RBP13.92□□□□□ -0.18
USP46-204ENST00000503060 FSD1Q9BTV5 496 aa13.92□□□□□ -0.18
USP46-204ENST00000503060 THRAP3Q9Y2W1 955 aaKnown RBP13.92□□□□□ -0.18
USP46-204ENST00000503060 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.92□□□□□ -0.18
USP46-204ENST00000503060 MAP3K15Q6ZN16 1313 aa13.91□□□□□ -0.18
USP46-204ENST00000503060 CLGNO14967 610 aa13.91□□□□□ -0.18
USP46-204ENST00000503060 TRAK2O60296 914 aa13.91□□□□□ -0.18
USP46-204ENST00000503060 PRIM1P49642 420 aaKnown RBP13.91□□□□□ -0.18
USP46-204ENST00000503060 CUL4AQ13619 759 aa13.91□□□□□ -0.18
USP46-204ENST00000503060 TMCO4Q5TGY1 634 aa13.91□□□□□ -0.18
USP46-204ENST00000503060 EXOC8Q8IYI6 725 aa13.91□□□□□ -0.18
USP46-204ENST00000503060 RASEFQ8IZ41 740 aa13.91□□□□□ -0.18
USP46-204ENST00000503060 DBNDD2Q9BQY9 259 aa13.91□□□□□ -0.18
USP46-204ENST00000503060 SNRKQ9NRH2 765 aa13.91□□□□□ -0.18
USP46-204ENST00000503060 CYP2E1P05181 493 aaPredicted RBP13.91□□□□□ -0.18
USP46-204ENST00000503060 IL15P40933 162 aaPredicted RBP13.91□□□□□ -0.18
USP46-204ENST00000503060 CLEC17AQ6ZS10 378 aa13.91□□□□□ -0.18
USP46-204ENST00000503060 FAM227BQ96M60 508 aa13.91□□□□□ -0.18
USP46-204ENST00000503060 DOT1LQ8TEK3 1739 aa13.9□□□□□ -0.18
USP46-204ENST00000503060 CCDC171Q6TFL3 1326 aa13.9□□□□□ -0.18
USP46-204ENST00000503060 EYA2O00167 538 aa13.9□□□□□ -0.18
USP46-204ENST00000503060 PCCAP05165 728 aaPredicted RBP13.9□□□□□ -0.18
USP46-204ENST00000503060 GIGYF2Q6Y7W6 1299 aaKnown RBP13.9□□□□□ -0.18
USP46-204ENST00000503060 GPR108Q9NPR9 543 aa13.9□□□□□ -0.18
USP46-204ENST00000503060 DDB1Q16531 1140 aa13.9□□□□□ -0.18
USP46-204ENST00000503060 KCNB2Q92953 911 aa13.9□□□□□ -0.18
USP46-204ENST00000503060 A0A0D9SFI3 127 aa13.89□□□□□ -0.19
USP46-204ENST00000503060 NOL8Q76FK4 1167 aaKnown RBP13.89□□□□□ -0.19
USP46-204ENST00000503060 CCDC125Q86Z20 511 aa13.89□□□□□ -0.19
USP46-204ENST00000503060 ZNF594Q96JF6 807 aaPredicted RBP13.89□□□□□ -0.19
USP46-204ENST00000503060 PLA2G12BQ9BX93 195 aa13.89□□□□□ -0.19
USP46-204ENST00000503060 ZBTB1Q9Y2K1 713 aa13.89□□□□□ -0.19
USP46-204ENST00000503060 NUTM2BA6NNL0 878 aaPredicted RBP13.89□□□□□ -0.19
USP46-204ENST00000503060 NUTM2EB1AL46 878 aaPredicted RBP13.89□□□□□ -0.19
USP46-204ENST00000503060 CIAO1O76071 339 aa13.89□□□□□ -0.19
USP46-204ENST00000503060 NUTM2AQ8IVF1 878 aaPredicted RBP13.89□□□□□ -0.19
USP46-204ENST00000503060 EDC3Q96F86 508 aaKnown RBP13.89□□□□□ -0.19
USP46-204ENST00000503060 BAG4O95429 457 aaKnown RBP13.88□□□□□ -0.19
USP46-204ENST00000503060 NECTIN1Q15223 517 aa13.88□□□□□ -0.19
USP46-204ENST00000503060 HLFQ16534 295 aa13.88□□□□□ -0.19
USP46-204ENST00000503060 LRRC24Q50LG9 513 aa13.88□□□□□ -0.19
USP46-204ENST00000503060 HSP90AB3PQ58FF7 597 aa13.88□□□□□ -0.19
USP46-204ENST00000503060 PRPF40BQ6NWY9 871 aaKnown RBP13.88□□□□□ -0.19
USP46-204ENST00000503060 ZBTB38Q8NAP3 1195 aaPredicted RBP13.88□□□□□ -0.19
USP46-204ENST00000503060 INTS4Q96HW7 963 aaKnown RBP13.88□□□□□ -0.19
USP46-204ENST00000503060 TTC14Q96N46 770 aa13.88□□□□□ -0.19
USP46-204ENST00000503060 HAUS7Q99871 368 aa13.88□□□□□ -0.19
USP46-204ENST00000503060 RFX7Q2KHR2 1363 aa13.88□□□□□ -0.19
USP46-204ENST00000503060 MED23Q9ULK4 1368 aa13.88□□□□□ -0.19
USP46-204ENST00000503060 KAT6BQ8WYB5 2073 aa13.88□□□□□ -0.19
USP46-204ENST00000503060 SPATA31A5Q5VU36 1347 aa13.88□□□□□ -0.19
USP46-204ENST00000503060 SPATA31A7Q8IWB4 1347 aa13.88□□□□□ -0.19
USP46-204ENST00000503060 LOC102724159A0A0B4J2E5 919 aa13.88□□□□□ -0.19
USP46-204ENST00000503060 PKP1Q13835 747 aa13.88□□□□□ -0.19
USP46-204ENST00000503060 PWP2Q15269 919 aaKnown RBP13.88□□□□□ -0.19
USP46-204ENST00000503060 TMTC2Q8N394 836 aa13.88□□□□□ -0.19
USP46-204ENST00000503060 ZNF622Q969S3 477 aaKnown RBP eCLIP13.88□□□□□ -0.19
USP46-204ENST00000503060 FAM89AQ96GI7 184 aa13.88□□□□□ -0.19
USP46-204ENST00000503060 NLRP10Q86W26 655 aa13.87□□□□□ -0.19
USP46-204ENST00000503060 MAP4K1Q92918 833 aa13.87□□□□□ -0.19
USP46-204ENST00000503060 NEUROD6Q96NK8 337 aa13.87□□□□□ -0.19
USP46-204ENST00000503060 RBM8AQ9Y5S9 174 aaKnown RBP13.87□□□□□ -0.19
USP46-204ENST00000503060 ZNF609O15014 1411 aa13.87□□□□□ -0.19
USP46-204ENST00000503060 CDHR2Q9BYE9 1310 aa13.87□□□□□ -0.19
USP46-204ENST00000503060 TOM1O60784 492 aa13.86□□□□□ -0.19
USP46-204ENST00000503060 IL6STP40189 918 aaPredicted RBP13.86□□□□□ -0.19
USP46-204ENST00000503060 PIP4K2BP78356 416 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms